RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 INHBEP58166 350 aa18.53■□□□□ 0.56
SS18-226ENST00000585241 TMEM132BQ14DG7 1078 aa18.53■□□□□ 0.56
SS18-226ENST00000585241 USH1GQ495M9 461 aa18.53■□□□□ 0.56
SS18-226ENST00000585241 FOXD4L5Q5VV16 416 aaPredicted RBP18.53■□□□□ 0.56
SS18-226ENST00000585241 MCTP1Q6DN14 999 aa18.53■□□□□ 0.56
SS18-226ENST00000585241 SAMD1Q6SPF0 538 aaPredicted RBP18.53■□□□□ 0.56
SS18-226ENST00000585241 BICD2Q8TD16 824 aa18.53■□□□□ 0.56
SS18-226ENST00000585241 OXER1Q8TDS5 423 aa18.53■□□□□ 0.56
SS18-226ENST00000585241 FOXD4L4Q8WXT5 416 aaPredicted RBP18.53■□□□□ 0.56
SS18-226ENST00000585241 AGBL1Q96MI9 1066 aa18.53■□□□□ 0.56
SS18-226ENST00000585241 PTPN18Q99952 460 aa18.53■□□□□ 0.56
SS18-226ENST00000585241 RAVER2Q9HCJ3 691 aaKnown RBP18.53■□□□□ 0.56
SS18-226ENST00000585241 CCPG1Q9ULG6 757 aa18.53■□□□□ 0.56
SS18-226ENST00000585241 MRPL11Q9Y3B7 192 aaKnown RBP18.53■□□□□ 0.56
SS18-226ENST00000585241 PDHXO00330 501 aa18.52■□□□□ 0.56
SS18-226ENST00000585241 ADAMTS3O15072 1205 aa18.52■□□□□ 0.56
SS18-226ENST00000585241 CLK2P49760 499 aaKnown RBP18.52■□□□□ 0.56
SS18-226ENST00000585241 NR5A1Q13285 461 aa18.52■□□□□ 0.56
SS18-226ENST00000585241 TKFCQ3LXA3 575 aa18.52■□□□□ 0.56
SS18-226ENST00000585241 NOSTRINQ8IVI9 506 aa18.52■□□□□ 0.56
SS18-226ENST00000585241 FAM43AQ8N2R8 423 aa18.52■□□□□ 0.56
SS18-226ENST00000585241 CUL5Q93034 780 aa18.52■□□□□ 0.56
SS18-226ENST00000585241 TEX13BQ9BXU2 312 aa18.52■□□□□ 0.56
SS18-226ENST00000585241 MAF1Q9H063 256 aa18.52■□□□□ 0.56
SS18-226ENST00000585241 CTDP1Q9Y5B0 961 aaPredicted RBP18.52■□□□□ 0.56
SS18-226ENST00000585241 MYH15Q9Y2K3 1946 aa18.51■□□□□ 0.55
SS18-226ENST00000585241 PIK3CDO00329 1044 aa18.51■□□□□ 0.55
SS18-226ENST00000585241 CNMDO75829 334 aa18.51■□□□□ 0.55
SS18-226ENST00000585241 TAL1P17542 331 aaPredicted RBP18.51■□□□□ 0.55
SS18-226ENST00000585241 MRPL12P52815 198 aaKnown RBP18.51■□□□□ 0.55
SS18-226ENST00000585241 CPXCR1Q8N123 301 aa18.51■□□□□ 0.55
SS18-226ENST00000585241 SAMD3Q8N6K7 520 aa18.51■□□□□ 0.55
SS18-226ENST00000585241 CLEC4DQ8WXI8 215 aa18.51■□□□□ 0.55
SS18-226ENST00000585241 PSTPIP2Q9H939 334 aa18.51■□□□□ 0.55
SS18-226ENST00000585241 PCDHA6Q9UN73 950 aa18.51■□□□□ 0.55
SS18-226ENST00000585241 RABGAP1Q9Y3P9 1069 aa18.51■□□□□ 0.55
SS18-226ENST00000585241 PCDHA8Q9Y5H6 950 aa18.51■□□□□ 0.55
SS18-226ENST00000585241 MEIS2O14770 477 aa18.5■□□□□ 0.55
SS18-226ENST00000585241 MYSM1Q5VVJ2 828 aa18.5■□□□□ 0.55
SS18-226ENST00000585241 MCTP2Q6DN12 878 aa18.5■□□□□ 0.55
SS18-226ENST00000585241 REXO1Q8N1G1 1221 aaKnown RBP18.5■□□□□ 0.55
SS18-226ENST00000585241 PARK7Q99497 189 aaKnown RBP18.5■□□□□ 0.55
SS18-226ENST00000585241 BTBD7Q9P203 1132 aa18.5■□□□□ 0.55
SS18-226ENST00000585241 IGF2BP3O00425 579 aaKnown RBP eCLIP18.49■□□□□ 0.55
SS18-226ENST00000585241 STAT3P40763 770 aa18.49■□□□□ 0.55
SS18-226ENST00000585241 TM4SF4P48230 202 aa18.49■□□□□ 0.55
SS18-226ENST00000585241 SREBF2Q12772 1141 aa18.49■□□□□ 0.55
SS18-226ENST00000585241 AP3B2Q13367 1082 aa18.49■□□□□ 0.55
SS18-226ENST00000585241 GNL2Q13823 731 aaKnown RBP18.49■□□□□ 0.55
SS18-226ENST00000585241 EARS2Q5JPH6 523 aaKnown RBP18.49■□□□□ 0.55
SS18-226ENST00000585241 ATL3Q6DD88 541 aa18.49■□□□□ 0.55
SS18-226ENST00000585241 SNRNP48Q6IEG0 339 aaKnown RBP18.49■□□□□ 0.55
SS18-226ENST00000585241 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.49■□□□□ 0.55
SS18-226ENST00000585241 KRT25Q7Z3Z0 450 aa18.49■□□□□ 0.55
SS18-226ENST00000585241 RIOX2Q8IUF8 465 aa18.49■□□□□ 0.55
SS18-226ENST00000585241 MAP3K20Q9NYL2 800 aaKnown RBP18.49■□□□□ 0.55
SS18-226ENST00000585241 RBPJLQ9UBG7 517 aa18.49■□□□□ 0.55
SS18-226ENST00000585241 RBBP6Q7Z6E9 1792 aaKnown RBP18.49■□□□□ 0.55
SS18-226ENST00000585241 ADGRA2Q96PE1 1338 aa18.49■□□□□ 0.55
SS18-226ENST00000585241 BAG4O95429 457 aaKnown RBP18.48■□□□□ 0.55
SS18-226ENST00000585241 CYP2C8P10632 490 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 ALAS1P13196 640 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 COPB2P35606 906 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 GCLCP48506 637 aaPredicted RBP18.48■□□□□ 0.55
SS18-226ENST00000585241 NOGQ13253 232 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 DEFB115Q30KQ5 88 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 CYP4F22Q6NT55 531 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 FAM173BQ6P4H8 233 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 MCF2L2Q86YR7 1114 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 RASGRP4Q8TDF6 673 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 SPATC1LQ9H0A9 340 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 TXNRD2Q9NNW7 524 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 RNF146Q9NTX7 359 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 MORF4L1Q9UBU8 362 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 RIPK3Q9Y572 518 aa18.48■□□□□ 0.55
SS18-226ENST00000585241 TRAPPC10P48553 1259 aa18.47■□□□□ 0.55
SS18-226ENST00000585241 HSD17B4P51659 736 aa18.47■□□□□ 0.55
SS18-226ENST00000585241 RILPL1Q5EBL4 403 aa18.47■□□□□ 0.55
SS18-226ENST00000585241 MUM1L1Q5H9M0 696 aa18.47■□□□□ 0.55
SS18-226ENST00000585241 IFNL1Q8IU54 200 aa18.47■□□□□ 0.55
SS18-226ENST00000585241 CHST13Q8NET6 341 aa18.47■□□□□ 0.55
SS18-226ENST00000585241 CAPNS2Q96L46 248 aa18.47■□□□□ 0.55
SS18-226ENST00000585241 TRERF1Q96PN7 1200 aa18.47■□□□□ 0.55
SS18-226ENST00000585241 CCDC194A0A1B0GVG4 234 aa18.46■□□□□ 0.55
SS18-226ENST00000585241 FAM205CA6NFA0 338 aa18.46■□□□□ 0.55
SS18-226ENST00000585241 GCOM1H8Y6P7 765 aaPredicted RBP18.46■□□□□ 0.55
SS18-226ENST00000585241 NFIBO00712 420 aa18.46■□□□□ 0.55
SS18-226ENST00000585241 SLC25A27O95847 323 aa18.46■□□□□ 0.55
SS18-226ENST00000585241 FOSP01100 380 aaPredicted RBP18.46■□□□□ 0.55
SS18-226ENST00000585241 POLR2MP0CAP2 368 aa18.46■□□□□ 0.55
SS18-226ENST00000585241 DNM1Q05193 864 aaKnown RBP18.46■□□□□ 0.55
SS18-226ENST00000585241 UBE2SQ16763 222 aa18.46■□□□□ 0.55
SS18-226ENST00000585241 NOM1Q5C9Z4 860 aaKnown RBP18.46■□□□□ 0.55
SS18-226ENST00000585241 USP17L6PQ6QN14 398 aa18.46■□□□□ 0.55
SS18-226ENST00000585241 PIK3AP1Q6ZUJ8 805 aa18.46■□□□□ 0.55
SS18-226ENST00000585241 REM2Q8IYK8 340 aaPredicted RBP18.46■□□□□ 0.55
SS18-226ENST00000585241 SHCBP1Q8NEM2 672 aa18.46■□□□□ 0.55
SS18-226ENST00000585241 GBP4Q96PP9 640 aa18.46■□□□□ 0.55
SS18-226ENST00000585241 ACAD9Q9H845 621 aa18.46■□□□□ 0.55
SS18-226ENST00000585241 TMEM260Q9NX78 707 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms