RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 STXBP3O00186 592 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 IGSF3O75054 1194 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 EVCP57679 992 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 MTF1Q14872 753 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 NBPF12Q5TAG4 269 aaPredicted RBP11.59□□□□□ -0.55
RFFL-212ENST00000584655 TCERG1LQ5VWI1 586 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 IRX2Q9BZI1 471 aaPredicted RBP11.59□□□□□ -0.55
RFFL-212ENST00000584655 RGL1Q9NZL6 768 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 CTAGE5O15320 804 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 FLOT1O75955 427 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 IQUBQ8NA54 791 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 AGBL1Q96MI9 1066 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 PSMB7Q99436 277 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 PAGR1Q9BTK6 254 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 RAVER2Q9HCJ3 691 aaKnown RBP11.59□□□□□ -0.55
RFFL-212ENST00000584655 KIAA1024Q9UPX6 916 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 USP54Q70EL1 1684 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 TMEM150BA6NC51 233 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 PPP1R11O60927 126 aaPredicted RBP11.59□□□□□ -0.55
RFFL-212ENST00000584655 DDNO94850 711 aaPredicted RBP11.59□□□□□ -0.55
RFFL-212ENST00000584655 GMPSP49915 693 aaPredicted RBP11.59□□□□□ -0.55
RFFL-212ENST00000584655 TPH2Q8IWU9 490 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 FLAD1Q8NFF5 587 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 CNKSR2Q8WXI2 1034 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 CRYBG1Q9Y4K1 1723 aa11.59□□□□□ -0.55
RFFL-212ENST00000584655 EIF2AK2P19525 551 aaKnown RBP11.58□□□□□ -0.55
RFFL-212ENST00000584655 GNAQP50148 359 aa11.58□□□□□ -0.55
RFFL-212ENST00000584655 DPYDQ12882 1025 aa11.58□□□□□ -0.55
RFFL-212ENST00000584655 GRM4Q14833 912 aa11.58□□□□□ -0.55
RFFL-212ENST00000584655 NEK8Q86SG6 692 aa11.58□□□□□ -0.55
RFFL-212ENST00000584655 DNAAF5Q86Y56 855 aa11.58□□□□□ -0.55
RFFL-212ENST00000584655 CCDC148Q8NFR7 591 aa11.58□□□□□ -0.55
RFFL-212ENST00000584655 ANAPC4Q9UJX5 808 aa11.58□□□□□ -0.55
RFFL-212ENST00000584655 POTEFA5A3E0 1075 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 KIAA1755Q5JYT7 1200 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 POTEGQ6S5H5 508 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 POTEEQ6S8J3 1075 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 CCDC34Q96HJ3 373 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 ZNF70Q9UC06 446 aaPredicted RBP11.58□□□□□ -0.56
RFFL-212ENST00000584655 SRPRBQ9Y5M8 271 aaKnown RBP11.58□□□□□ -0.56
RFFL-212ENST00000584655 A0A0U1RQJ8 604 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 POTEB3A0JP26 581 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 POTECB2RU33 542 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 GNA11P29992 359 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 CTTNQ14247 550 aaKnown RBP11.58□□□□□ -0.56
RFFL-212ENST00000584655 POTEBQ6S5H4 581 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 CCDC155Q8N6L0 562 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 ATRIPQ8WXE1 791 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 SRRTQ9BXP5 876 aaKnown RBP11.58□□□□□ -0.56
RFFL-212ENST00000584655 MKRN1Q9UHC7 482 aaKnown RBP11.58□□□□□ -0.56
RFFL-212ENST00000584655 USP20Q9Y2K6 914 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 AKAP11Q9UKA4 1901 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 ATRNO75882 1429 aa11.58□□□□□ -0.56
RFFL-212ENST00000584655 SPDYE4A6NLX3 237 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 NKRFO15226 690 aaKnown RBP eCLIP11.57□□□□□ -0.565e-10■■■□□ 17.6
RFFL-212ENST00000584655 TFRCP02786 760 aaKnown RBP11.57□□□□□ -0.56
RFFL-212ENST00000584655 MTIF2P46199 727 aaKnown RBP11.57□□□□□ -0.56
RFFL-212ENST00000584655 NPY5RQ15761 445 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 STRIP1Q5VSL9 837 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 ANGEL2Q5VTE6 544 aaKnown RBP11.57□□□□□ -0.56
RFFL-212ENST00000584655 CIAPIN1Q6FI81 312 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 SYT10Q6XYQ8 523 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 BARHL2Q9NY43 387 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 DDX25Q9UHL0 483 aaKnown RBP11.57□□□□□ -0.56
RFFL-212ENST00000584655 CNOT7Q9UIV1 285 aaKnown RBP11.57□□□□□ -0.56
RFFL-212ENST00000584655 BTAF1O14981 1849 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 WNT10BO00744 389 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 NELFBQ8WX92 580 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 IL17RAQ96F46 866 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 CCDC43Q96MW1 224 aaKnown RBP11.57□□□□□ -0.56
RFFL-212ENST00000584655 EPC1Q9H2F5 836 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 EPS15P42566 896 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 NAP1L1P55209 391 aaKnown RBP11.57□□□□□ -0.56
RFFL-212ENST00000584655 PPP4CP60510 307 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 MRPS25P82663 173 aaKnown RBP11.57□□□□□ -0.56
RFFL-212ENST00000584655 APBA1Q02410 837 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 SBK1Q52WX2 424 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 BMP3P12645 472 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 KLK7P49862 253 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 FAM207AQ9NSI2 230 aaPredicted RBP11.57□□□□□ -0.56
RFFL-212ENST00000584655 DNAI1Q9UI46 699 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 PCDHA12Q9UN75 941 aa11.57□□□□□ -0.56
RFFL-212ENST00000584655 A0A1W2PQ27 194 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 A0A1W2PQ64 194 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 A0A1W2PQD8 194 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 TESPA1A2RU30 521 aaPredicted RBP11.56□□□□□ -0.56
RFFL-212ENST00000584655 OR52Z1P0C646 297 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 ZNF543Q08ER8 600 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 KCNK18Q7Z418 384 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 ANKRD13CQ8N6S4 541 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 FAM84AQ96KN4 292 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 WRNIP1Q96S55 665 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 PPP1R16BQ96T49 567 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.56□□□□□ -0.56
RFFL-212ENST00000584655 EXOC1Q9NV70 894 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 HMGCS2P54868 508 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 UBXN1Q04323 297 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 CEP135Q66GS9 1140 aa11.56□□□□□ -0.56
RFFL-212ENST00000584655 FBXO11Q86XK2 927 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms