RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TSPY2A6NKD2 308 aa18.51■□□□□ 0.55
SKA2-209ENST00000583976 DCDC2CA8MYV0 355 aa18.51■□□□□ 0.55
SKA2-209ENST00000583976 ALAS1P13196 640 aa18.51■□□□□ 0.55
SKA2-209ENST00000583976 FOSL2P15408 326 aa18.51■□□□□ 0.55
SKA2-209ENST00000583976 GJA9P57773 515 aa18.51■□□□□ 0.55
SKA2-209ENST00000583976 TTC22Q5TAA0 569 aa18.51■□□□□ 0.55
SKA2-209ENST00000583976 TOX2Q96NM4 488 aa18.51■□□□□ 0.55
SKA2-209ENST00000583976 PURBQ96QR8 312 aaKnown RBP18.51■□□□□ 0.55
SKA2-209ENST00000583976 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.51■□□□□ 0.55
SKA2-209ENST00000583976 PPP1R12CQ9BZL4 782 aa18.51■□□□□ 0.55
SKA2-209ENST00000583976 SLC3A2P08195 630 aaKnown RBP18.5■□□□□ 0.55
SKA2-209ENST00000583976 GSPT1P15170 499 aaKnown RBP18.5■□□□□ 0.55
SKA2-209ENST00000583976 DNAJB2P25686 324 aa18.5■□□□□ 0.55
SKA2-209ENST00000583976 TMEM63BQ5T3F8 832 aa18.5■□□□□ 0.55
SKA2-209ENST00000583976 FAM160B2Q86V87 743 aa18.5■□□□□ 0.55
SKA2-209ENST00000583976 FBXO16Q8IX29 292 aaPredicted RBP18.5■□□□□ 0.55
SKA2-209ENST00000583976 FAM126BQ8IXS8 530 aa18.5■□□□□ 0.55
SKA2-209ENST00000583976 STAG1Q8WVM7 1258 aa18.5■□□□□ 0.55
SKA2-209ENST00000583976 PRR12Q9ULL5 1215 aa18.5■□□□□ 0.55
SKA2-209ENST00000583976 ELP1O95163 1332 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 MUC3AQ02505 3323 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 A0A0U1RQG5 324 aaPredicted RBP18.49■□□□□ 0.55
SKA2-209ENST00000583976 TIMP1P01033 207 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 CDK7P50613 346 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 CCDC96Q2M329 555 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 GNASQ5JWF2 1037 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 CXCL17Q6UXB2 119 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 EEPD1Q7L9B9 569 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 TLK2Q86UE8 772 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 TRERF1Q96PN7 1200 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 PDGFCQ9NRA1 345 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 GBF1Q92538 1859 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 CHD7Q9P2D1 2997 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 MROH7Q68CQ1 1323 aa18.49■□□□□ 0.55
SKA2-209ENST00000583976 A0A0D9SFI3 127 aa18.48■□□□□ 0.55
SKA2-209ENST00000583976 ARVCFO00192 962 aa18.48■□□□□ 0.55
SKA2-209ENST00000583976 RANBP6O60518 1105 aaKnown RBP18.48■□□□□ 0.55
SKA2-209ENST00000583976 ACRP10323 421 aa18.48■□□□□ 0.55
SKA2-209ENST00000583976 CSF2RAP15509 400 aa18.48■□□□□ 0.55
SKA2-209ENST00000583976 NOL8Q76FK4 1167 aaKnown RBP18.48■□□□□ 0.55
SKA2-209ENST00000583976 C16orf59Q7L2K0 433 aa18.48■□□□□ 0.55
SKA2-209ENST00000583976 USP38Q8NB14 1042 aa18.48■□□□□ 0.55
SKA2-209ENST00000583976 PCSK9Q8NBP7 692 aaKnown RBP18.48■□□□□ 0.55
SKA2-209ENST00000583976 VTI1AQ96AJ9 217 aa18.48■□□□□ 0.55
SKA2-209ENST00000583976 FAM227BQ96M60 508 aa18.48■□□□□ 0.55
SKA2-209ENST00000583976 SPC25Q9HBM1 224 aa18.48■□□□□ 0.55
SKA2-209ENST00000583976 GNEQ9Y223 722 aaKnown RBP18.48■□□□□ 0.55
SKA2-209ENST00000583976 UMODL1Q5DID0 1318 aa18.48■□□□□ 0.55
SKA2-209ENST00000583976 LAMA4Q16363 1823 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 GRXCR1A8MXD5 290 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 SMPD1P17405 629 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 SDSP20132 328 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 SLC16A2P36021 539 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 PBX2P40425 430 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 TNFAIP2Q03169 654 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 GRIN2CQ14957 1233 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 TTBK2Q6IQ55 1244 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 MFSD5Q6N075 450 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 NSMFQ6X4W1 530 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 CHURC1Q8WUH1 139 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 CYP39A1Q9NYL5 469 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 CCPG1Q9ULG6 757 aa18.47■□□□□ 0.55
SKA2-209ENST00000583976 FRMPD2Q68DX3 1309 aaPredicted RBP18.47■□□□□ 0.55
SKA2-209ENST00000583976 FDX1P10109 184 aa18.46■□□□□ 0.55
SKA2-209ENST00000583976 CYP2C18P33260 490 aa18.46■□□□□ 0.55
SKA2-209ENST00000583976 RRP12Q5JTH9 1297 aaKnown RBP18.46■□□□□ 0.55
SKA2-209ENST00000583976 TMEM240Q5SV17 173 aa18.46■□□□□ 0.55
SKA2-209ENST00000583976 ZNF589Q86UQ0 364 aaPredicted RBP18.46■□□□□ 0.55
SKA2-209ENST00000583976 ANAPC4Q9UJX5 808 aa18.46■□□□□ 0.55
SKA2-209ENST00000583976 GRIN2DO15399 1336 aa18.46■□□□□ 0.55
SKA2-209ENST00000583976 TMEM265A0A087WTH1 108 aa18.45■□□□□ 0.54
SKA2-209ENST00000583976 NFIBO00712 420 aa18.45■□□□□ 0.54
SKA2-209ENST00000583976 PLA2G6O60733 806 aa18.45■□□□□ 0.54
SKA2-209ENST00000583976 NOVP48745 357 aa18.45■□□□□ 0.54
SKA2-209ENST00000583976 PSMC6P62333 389 aa18.45■□□□□ 0.54
SKA2-209ENST00000583976 NKX3-2P78367 333 aa18.45■□□□□ 0.54
SKA2-209ENST00000583976 PPIGQ13427 754 aaKnown RBP eCLIP18.45■□□□□ 0.54
SKA2-209ENST00000583976 FSCN1Q16658 493 aaKnown RBP18.45■□□□□ 0.54
SKA2-209ENST00000583976 TKFCQ3LXA3 575 aa18.45■□□□□ 0.54
SKA2-209ENST00000583976 RCSD1Q6JBY9 416 aa18.45■□□□□ 0.54
SKA2-209ENST00000583976 SLC30A10Q6XR72 485 aa18.45■□□□□ 0.54
SKA2-209ENST00000583976 TIFAQ96CG3 184 aa18.45■□□□□ 0.54
SKA2-209ENST00000583976 RANBP17Q9H2T7 1088 aaKnown RBP18.45■□□□□ 0.54
SKA2-209ENST00000583976 TOMM22Q9NS69 142 aa18.45■□□□□ 0.54
SKA2-209ENST00000583976 ASB14A6NK59 587 aa18.44■□□□□ 0.54
SKA2-209ENST00000583976 ORC4O43929 436 aa18.44■□□□□ 0.54
SKA2-209ENST00000583976 CD4P01730 458 aa18.44■□□□□ 0.54
SKA2-209ENST00000583976 HAND2P61296 217 aa18.44■□□□□ 0.54
SKA2-209ENST00000583976 NMIQ13287 307 aaPredicted RBP18.44■□□□□ 0.54
SKA2-209ENST00000583976 TAPT1Q6NXT6 567 aa18.44■□□□□ 0.54
SKA2-209ENST00000583976 DCAF4Q8WV16 495 aa18.44■□□□□ 0.54
SKA2-209ENST00000583976 PBX4Q9BYU1 374 aa18.44■□□□□ 0.54
SKA2-209ENST00000583976 TTC28Q96AY4 2481 aa18.43■□□□□ 0.54
SKA2-209ENST00000583976 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.43■□□□□ 0.54
SKA2-209ENST00000583976 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.43■□□□□ 0.54
SKA2-209ENST00000583976 DYNC1LI2O43237 492 aaPredicted RBP18.43■□□□□ 0.54
SKA2-209ENST00000583976 ICAM1P05362 532 aa18.43■□□□□ 0.54
SKA2-209ENST00000583976 RASIP1Q5U651 963 aa18.43■□□□□ 0.54
SKA2-209ENST00000583976 SYDE2Q5VT97 1194 aa18.43■□□□□ 0.54
SKA2-209ENST00000583976 ZNF365Q70YC5 407 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms