RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 SAGE1Q9NXZ1 904 aa13.44□□□□□ -0.26
CDRT1-207ENST00000583965 MRPL11Q9Y3B7 192 aaKnown RBP13.44□□□□□ -0.26
CDRT1-207ENST00000583965 PCDHA1Q9Y5I3 950 aa13.44□□□□□ -0.26
CDRT1-207ENST00000583965 MYH7BA7E2Y1 1941 aa13.44□□□□□ -0.26
CDRT1-207ENST00000583965 LCTP09848 1927 aa13.44□□□□□ -0.26
CDRT1-207ENST00000583965 ESYT2A0FGR8 921 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 STXBP3O00186 592 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 BCRP11274 1271 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 PDIA4P13667 645 aaKnown RBP13.43□□□□□ -0.26
CDRT1-207ENST00000583965 NAPAP54920 295 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 TRIM29Q14134 588 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 PLS1Q14651 629 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 USH1GQ495M9 461 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 C17orf99Q6UX52 265 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDRT1-207ENST00000583965 SAMD3Q8N6K7 520 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 SHCBP1Q8NEM2 672 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 CHST13Q8NET6 341 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 GPKOWQ92917 476 aaPredicted RBP eCLIP13.43□□□□□ -0.26
CDRT1-207ENST00000583965 AGBL1Q96MI9 1066 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 GLT8D2Q9H1C3 349 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 TXNRD2Q9NNW7 524 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 RNF186Q9NXI6 227 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 FBXO40Q9UH90 709 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 CASP8AP2Q9UKL3 1982 aa13.43□□□□□ -0.26
CDRT1-207ENST00000583965 ALAS1P13196 640 aa13.42□□□□□ -0.26
CDRT1-207ENST00000583965 GALNT17Q6IS24 598 aa13.42□□□□□ -0.26
CDRT1-207ENST00000583965 COA7Q96BR5 231 aa13.42□□□□□ -0.26
CDRT1-207ENST00000583965 C8orf76Q96K31 380 aa13.42□□□□□ -0.26
CDRT1-207ENST00000583965 BEGAINQ9BUH8 593 aa13.42□□□□□ -0.26
CDRT1-207ENST00000583965 MOV10L1Q9BXT6 1211 aaKnown RBP13.42□□□□□ -0.26
CDRT1-207ENST00000583965 MROH8Q9H579 483 aa13.42□□□□□ -0.26
CDRT1-207ENST00000583965 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
CDRT1-207ENST00000583965 CPA4Q9UI42 421 aa13.42□□□□□ -0.26
CDRT1-207ENST00000583965 TRPA1O75762 1119 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 CALML3P27482 149 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 GNA11P29992 359 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 Q3C1V9 767 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 NOM1Q5C9Z4 860 aaKnown RBP13.41□□□□□ -0.26
CDRT1-207ENST00000583965 LARP1BQ659C4 914 aaKnown RBP13.41□□□□□ -0.26
CDRT1-207ENST00000583965 MCF2L2Q86YR7 1114 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 BICD2Q8TD16 824 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 AIFM3Q96NN9 605 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 TRERF1Q96PN7 1200 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 PHF20Q9BVI0 1012 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 ZMYND12Q9H0C1 365 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 ACAD9Q9H845 621 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 RNF146Q9NTX7 359 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 MAP3K20Q9NYL2 800 aaKnown RBP13.41□□□□□ -0.26
CDRT1-207ENST00000583965 VPS54Q9P1Q0 977 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 RIPK3Q9Y572 518 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 MCM3APO60318 1980 aa13.41□□□□□ -0.26
CDRT1-207ENST00000583965 DTNBO60941 627 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 ERCC3P19447 782 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 MAPK4P31152 587 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 ADCY7P51828 1080 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 MRPL12P52815 198 aaKnown RBP13.4□□□□□ -0.26
CDRT1-207ENST00000583965 NLRP5P59047 1200 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 GHRHRQ02643 423 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 TYW1BQ6NUM6 668 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 NCAPG2Q86XI2 1143 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 CCAR1Q8IX12 1150 aaKnown RBP13.4□□□□□ -0.26
CDRT1-207ENST00000583965 SPRYD3Q8NCJ5 442 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 FBXO18Q8NFZ0 1043 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 CLEC4DQ8WXI8 215 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 CUL5Q93034 780 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 C6orf50Q9HD87 102 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 RIC8AQ9NPQ8 531 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 HOMER2Q9NSB8 354 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 ZSWIM8A7E2V4 1837 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 TCHHQ07283 1943 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 KIAA1217Q5T5P2 1943 aa13.4□□□□□ -0.26
CDRT1-207ENST00000583965 PFASO15067 1338 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 SMCO2A6NFE2 343 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 H3BQV1 296 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 STRNO43815 780 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 PEX10O60683 326 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 TBC1D8O95759 1140 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 SLC4A3P48751 1232 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 MUM1L1Q5H9M0 696 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 IFFO2Q5TF58 517 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 KRT40Q6A162 431 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 MCTP2Q6DN12 878 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 ABRAQ8N0Z2 381 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 DAGLBQ8NCG7 672 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 PSTPIP2Q9H939 334 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 BRMS1Q9HCU9 246 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 WBP1LQ9NX94 342 aa13.39□□□□□ -0.27
CDRT1-207ENST00000583965 PIK3CDO00329 1044 aa13.38□□□□□ -0.27
CDRT1-207ENST00000583965 NFIBO00712 420 aa13.38□□□□□ -0.27
CDRT1-207ENST00000583965 OPLAHO14841 1288 aa13.38□□□□□ -0.27
CDRT1-207ENST00000583965 MMP1P03956 469 aa13.38□□□□□ -0.27
CDRT1-207ENST00000583965 SYT1P21579 422 aa13.38□□□□□ -0.27
CDRT1-207ENST00000583965 HSD17B4P51659 736 aa13.38□□□□□ -0.27
CDRT1-207ENST00000583965 SAFBQ15424 915 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDRT1-207ENST00000583965 JMYQ8N9B5 988 aa13.38□□□□□ -0.27
CDRT1-207ENST00000583965 SHISA4Q96DD7 197 aa13.38□□□□□ -0.27
CDRT1-207ENST00000583965 PORCNQ9H237 461 aa13.38□□□□□ -0.27
CDRT1-207ENST00000583965 R3HDMLQ9H3Y0 253 aa13.38□□□□□ -0.27
CDRT1-207ENST00000583965 PCDHA4Q9UN74 947 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms