RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 ZNF365Q70YC5 407 aa24.27■■□□□ 1.48
SRSF1-206ENST00000583741 TMEM199Q8N511 208 aa24.27■■□□□ 1.48
SRSF1-206ENST00000583741 RNF146Q9NTX7 359 aa24.27■■□□□ 1.48
SRSF1-206ENST00000583741 ISY1Q9ULR0 285 aaKnown RBP24.27■■□□□ 1.48
SRSF1-206ENST00000583741 CD4P01730 458 aa24.26■■□□□ 1.47
SRSF1-206ENST00000583741 PDE4AP27815 886 aa24.26■■□□□ 1.47
SRSF1-206ENST00000583741 CYP2C18P33260 490 aa24.26■■□□□ 1.47
SRSF1-206ENST00000583741 STAT2P52630 851 aa24.26■■□□□ 1.47
SRSF1-206ENST00000583741 PRDM6Q9NQX0 595 aa24.26■■□□□ 1.47
SRSF1-206ENST00000583741 XIRP2A4UGR9 3374 aa24.26■■□□□ 1.47
SRSF1-206ENST00000583741 TFAP4Q01664 338 aa24.26■■□□□ 1.47
SRSF1-206ENST00000583741 TNFAIP2Q03169 654 aa24.26■■□□□ 1.47
SRSF1-206ENST00000583741 CCDC174Q6PII3 467 aa24.26■■□□□ 1.47
SRSF1-206ENST00000583741 CXCL17Q6UXB2 119 aa24.26■■□□□ 1.47
SRSF1-206ENST00000583741 CCDC129Q6ZRS4 1044 aa24.26■■□□□ 1.47
SRSF1-206ENST00000583741 GNEQ9Y223 722 aaKnown RBP24.26■■□□□ 1.47
SRSF1-206ENST00000583741 TLR3O15455 904 aaKnown RBP24.25■■□□□ 1.47
SRSF1-206ENST00000583741 FDX1P10109 184 aa24.25■■□□□ 1.47
SRSF1-206ENST00000583741 PDE4BQ07343 736 aa24.25■■□□□ 1.47
SRSF1-206ENST00000583741 PSRC1Q6PGN9 363 aaPredicted RBP24.25■■□□□ 1.47
SRSF1-206ENST00000583741 RASGRP2Q7LDG7 609 aa24.25■■□□□ 1.47
SRSF1-206ENST00000583741 SYMPKQ92797 1274 aaKnown RBP24.25■■□□□ 1.47
SRSF1-206ENST00000583741 GMCL1Q96IK5 515 aa24.25■■□□□ 1.47
SRSF1-206ENST00000583741 NACAP1Q9BZK3 213 aa24.25■■□□□ 1.47
SRSF1-206ENST00000583741 UMODL1Q5DID0 1318 aa24.24■■□□□ 1.47
SRSF1-206ENST00000583741 MCCP23508 829 aa24.24■■□□□ 1.47
SRSF1-206ENST00000583741 PPARAQ07869 468 aa24.24■■□□□ 1.47
SRSF1-206ENST00000583741 TJAP1Q5JTD0 557 aa24.24■■□□□ 1.47
SRSF1-206ENST00000583741 NOL8Q76FK4 1167 aaKnown RBP24.24■■□□□ 1.47
SRSF1-206ENST00000583741 TLK2Q86UE8 772 aa24.24■■□□□ 1.47
SRSF1-206ENST00000583741 SLC43A3Q8NBI5 491 aa24.24■■□□□ 1.47
SRSF1-206ENST00000583741 STAG1Q8WVM7 1258 aa24.24■■□□□ 1.47
SRSF1-206ENST00000583741 PRDM12Q9H4Q4 367 aa24.24■■□□□ 1.47
SRSF1-206ENST00000583741 CXXC1Q9P0U4 656 aaPredicted RBP24.24■■□□□ 1.47
SRSF1-206ENST00000583741 SLC1A4P43007 532 aa24.23■■□□□ 1.47
SRSF1-206ENST00000583741 SNAP25P60880 206 aa24.23■■□□□ 1.47
SRSF1-206ENST00000583741 IKQ13123 557 aaPredicted RBP24.23■■□□□ 1.47
SRSF1-206ENST00000583741 FAM160B2Q86V87 743 aa24.23■■□□□ 1.47
SRSF1-206ENST00000583741 CHURC1Q8WUH1 139 aa24.23■■□□□ 1.47
SRSF1-206ENST00000583741 TRERF1Q96PN7 1200 aa24.23■■□□□ 1.47
SRSF1-206ENST00000583741 NAPBQ9H115 298 aa24.23■■□□□ 1.47
SRSF1-206ENST00000583741 IL23AQ9NPF7 189 aa24.23■■□□□ 1.47
SRSF1-206ENST00000583741 GRIN2DO15399 1336 aa24.22■■□□□ 1.47
SRSF1-206ENST00000583741 ASB14A6NK59 587 aa24.22■■□□□ 1.47
SRSF1-206ENST00000583741 ALAS1P13196 640 aa24.22■■□□□ 1.47
SRSF1-206ENST00000583741 SMPD1P17405 629 aa24.22■■□□□ 1.47
SRSF1-206ENST00000583741 FSCN1Q16658 493 aaKnown RBP24.22■■□□□ 1.47
SRSF1-206ENST00000583741 TMEM63BQ5T3F8 832 aa24.22■■□□□ 1.47
SRSF1-206ENST00000583741 KCTD1Q719H9 257 aa24.22■■□□□ 1.47
SRSF1-206ENST00000583741 PI4K2BQ8TCG2 481 aa24.22■■□□□ 1.47
SRSF1-206ENST00000583741 PDGFCQ9NRA1 345 aa24.22■■□□□ 1.47
SRSF1-206ENST00000583741 FOXP2O15409 715 aa24.21■■□□□ 1.47
SRSF1-206ENST00000583741 MUM1L1Q5H9M0 696 aa24.21■■□□□ 1.47
SRSF1-206ENST00000583741 OTUD7AQ8TE49 926 aaPredicted RBP24.21■■□□□ 1.47
SRSF1-206ENST00000583741 PPM1EQ8WY54 764 aa24.21■■□□□ 1.47
SRSF1-206ENST00000583741 HERVK_113Q902F9 699 aa24.21■■□□□ 1.47
SRSF1-206ENST00000583741 GAS2L1Q99501 681 aaPredicted RBP24.21■■□□□ 1.47
SRSF1-206ENST00000583741 HIPK3Q9H422 1215 aa24.21■■□□□ 1.47
SRSF1-206ENST00000583741 TRANK1O15050 2925 aa24.21■■□□□ 1.47
SRSF1-206ENST00000583741 TTC41PQ6P2S7 1318 aa24.21■■□□□ 1.47
SRSF1-206ENST00000583741 NMT2O60551 498 aa24.2■■□□□ 1.47
SRSF1-206ENST00000583741 SLC3A2P08195 630 aaKnown RBP24.2■■□□□ 1.47
SRSF1-206ENST00000583741 ITGA7Q13683 1181 aa24.2■■□□□ 1.47
SRSF1-206ENST00000583741 LRRFIP1Q32MZ4 808 aaKnown RBP24.2■■□□□ 1.47
SRSF1-206ENST00000583741 TKFCQ3LXA3 575 aa24.2■■□□□ 1.47
SRSF1-206ENST00000583741 ZMYM1Q5SVZ6 1142 aa24.2■■□□□ 1.47
SRSF1-206ENST00000583741 FBXO16Q8IX29 292 aaPredicted RBP24.2■■□□□ 1.47
SRSF1-206ENST00000583741 FSD1Q9BTV5 496 aa24.2■■□□□ 1.47
SRSF1-206ENST00000583741 INCENPQ9NQS7 918 aa24.2■■□□□ 1.47
SRSF1-206ENST00000583741 IL17RBQ9NRM6 502 aa24.2■■□□□ 1.47
SRSF1-206ENST00000583741 CYP39A1Q9NYL5 469 aa24.2■■□□□ 1.47
SRSF1-206ENST00000583741 STX8Q9UNK0 236 aa24.2■■□□□ 1.47
SRSF1-206ENST00000583741 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.2■■□□□ 1.47
SRSF1-206ENST00000583741 NCOR1O75376 2440 aa24.2■■□□□ 1.46
SRSF1-206ENST00000583741 DYNC1LI2O43237 492 aaPredicted RBP24.19■■□□□ 1.46
SRSF1-206ENST00000583741 PLA2G6O60733 806 aa24.19■■□□□ 1.46
SRSF1-206ENST00000583741 CABYRO75952 493 aa24.19■■□□□ 1.46
SRSF1-206ENST00000583741 ADGRE1Q14246 886 aa24.19■■□□□ 1.46
SRSF1-206ENST00000583741 TAPT1Q6NXT6 567 aa24.19■■□□□ 1.46
SRSF1-206ENST00000583741 EEPD1Q7L9B9 569 aa24.19■■□□□ 1.46
SRSF1-206ENST00000583741 PURBQ96QR8 312 aaKnown RBP24.19■■□□□ 1.46
SRSF1-206ENST00000583741 TRPV6Q9H1D0 765 aa24.19■■□□□ 1.46
SRSF1-206ENST00000583741 PRR12Q9ULL5 1215 aa24.19■■□□□ 1.46
SRSF1-206ENST00000583741 BDP1A6H8Y1 2624 aa24.19■■□□□ 1.46
SRSF1-206ENST00000583741 CTDSPL2Q05D32 466 aa24.19■■□□□ 1.46
SRSF1-206ENST00000583741 NOC4LQ9BVI4 516 aaKnown RBP24.19■■□□□ 1.46
SRSF1-206ENST00000583741 AP5M1Q9H0R1 490 aa24.19■■□□□ 1.46
SRSF1-206ENST00000583741 CCL23P55773 120 aa24.18■■□□□ 1.46
SRSF1-206ENST00000583741 PSMC6P62333 389 aa24.18■■□□□ 1.46
SRSF1-206ENST00000583741 AKNAD1Q5T1N1 836 aa24.18■■□□□ 1.46
SRSF1-206ENST00000583741 RCSD1Q6JBY9 416 aa24.18■■□□□ 1.46
SRSF1-206ENST00000583741 WNT8AQ9H1J5 351 aa24.18■■□□□ 1.46
SRSF1-206ENST00000583741 NKX2-4Q9H2Z4 354 aa24.18■■□□□ 1.46
SRSF1-206ENST00000583741 YBX2Q9Y2T7 364 aaKnown RBP24.18■■□□□ 1.46
SRSF1-206ENST00000583741 TSPY2A6NKD2 308 aa24.17■■□□□ 1.46
SRSF1-206ENST00000583741 B4GALT4O60513 344 aa24.17■■□□□ 1.46
SRSF1-206ENST00000583741 FGBP02675 491 aa24.17■■□□□ 1.46
SRSF1-206ENST00000583741 RAB30Q15771 203 aa24.17■■□□□ 1.46
SRSF1-206ENST00000583741 OTOP2Q7RTS6 562 aa24.17■■□□□ 1.46
SRSF1-206ENST00000583741 PLEKHM2Q8IWE5 1019 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 618 ms