RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 SYNGAP1Q96PV0 1343 aa29.07■■■□□ 2.24
TSEN54-209ENST00000583454 PDLIM7Q9NR12 457 aa29.07■■■□□ 2.24
TSEN54-209ENST00000583454 ISY1Q9ULR0 285 aaKnown RBP29.07■■■□□ 2.24
TSEN54-209ENST00000583454 ZBED4O75132 1171 aa29.06■■■□□ 2.24
TSEN54-209ENST00000583454 ADAMTS4O75173 837 aa29.06■■■□□ 2.24
TSEN54-209ENST00000583454 AKR1A1P14550 325 aa29.06■■■□□ 2.24
TSEN54-209ENST00000583454 HSPA4P34932 840 aa29.06■■■□□ 2.24
TSEN54-209ENST00000583454 ZNF543Q08ER8 600 aa29.06■■■□□ 2.24
TSEN54-209ENST00000583454 COL9A3Q14050 684 aaPredicted RBP29.06■■■□□ 2.24
TSEN54-209ENST00000583454 SART3Q15020 963 aaKnown RBP29.06■■■□□ 2.24
TSEN54-209ENST00000583454 CHST3Q7LGC8 479 aa29.06■■■□□ 2.24
TSEN54-209ENST00000583454 IGDCC4Q8TDY8 1250 aa29.06■■■□□ 2.24
TSEN54-209ENST00000583454 LBHD1Q9BQE6 289 aaPredicted RBP29.06■■■□□ 2.24
TSEN54-209ENST00000583454 UNC80Q8N2C7 3258 aa29.06■■■□□ 2.24
TSEN54-209ENST00000583454 LRRC37A2A6NM11 1700 aa29.06■■■□□ 2.24
TSEN54-209ENST00000583454 LCTP09848 1927 aa29.05■■■□□ 2.24
TSEN54-209ENST00000583454 MCM5P33992 734 aa29.05■■■□□ 2.24
TSEN54-209ENST00000583454 OAZ1P54368 228 aa29.05■■■□□ 2.24
TSEN54-209ENST00000583454 TTBK2Q6IQ55 1244 aa29.05■■■□□ 2.24
TSEN54-209ENST00000583454 SH3RF1Q7Z6J0 888 aa29.05■■■□□ 2.24
TSEN54-209ENST00000583454 ZNF467Q7Z7K2 595 aaPredicted RBP29.05■■■□□ 2.24
TSEN54-209ENST00000583454 ERICH2A1L162 156 aa29.04■■■□□ 2.24
TSEN54-209ENST00000583454 IKQ13123 557 aaPredicted RBP29.04■■■□□ 2.24
TSEN54-209ENST00000583454 DDX11Q96FC9 970 aa29.04■■■□□ 2.24
TSEN54-209ENST00000583454 GPCPD1Q9NPB8 672 aa29.04■■■□□ 2.24
TSEN54-209ENST00000583454 PRR12Q9ULL5 1215 aa29.04■■■□□ 2.24
TSEN54-209ENST00000583454 CNPY2Q9Y2B0 182 aa29.04■■■□□ 2.24
TSEN54-209ENST00000583454 ZNF536O15090 1300 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 FRMPD2Q68DX3 1309 aaPredicted RBP29.03■■■□□ 2.24
TSEN54-209ENST00000583454 SYNRGQ9UMZ2 1314 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 TRIM43BA6NCK2 446 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 PRC1O43663 620 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 KRT32Q14532 448 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 WTAPQ15007 396 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 TMEM67Q5HYA8 995 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 GPATCH4Q5T3I0 446 aaKnown RBP29.03■■■□□ 2.24
TSEN54-209ENST00000583454 RNF180Q86T96 592 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 TRIM43Q96BQ3 446 aaPredicted RBP29.03■■■□□ 2.24
TSEN54-209ENST00000583454 USP26Q9BXU7 913 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 SENP2Q9HC62 589 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 MTMR10Q9NXD2 777 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 PRKAG2Q9UGJ0 569 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 EYSQ5T1H1 3165 aa29.03■■■□□ 2.24
TSEN54-209ENST00000583454 A0A1W2PQ45 241 aaPredicted RBP29.02■■■□□ 2.24
TSEN54-209ENST00000583454 A0A1W2PQY0 241 aa29.02■■■□□ 2.24
TSEN54-209ENST00000583454 ADCY6O43306 1168 aa29.02■■■□□ 2.24
TSEN54-209ENST00000583454 SLC4A3P48751 1232 aa29.02■■■□□ 2.24
TSEN54-209ENST00000583454 TLE2Q04725 743 aa29.02■■■□□ 2.24
TSEN54-209ENST00000583454 CHST13Q8NET6 341 aa29.02■■■□□ 2.24
TSEN54-209ENST00000583454 TMEM87BQ96K49 555 aa29.02■■■□□ 2.24
TSEN54-209ENST00000583454 NEK1Q96PY6 1258 aa29.02■■■□□ 2.24
TSEN54-209ENST00000583454 ADCK5Q3MIX3 580 aa29.01■■■□□ 2.23
TSEN54-209ENST00000583454 SYDE2Q5VT97 1194 aa29.01■■■□□ 2.23
TSEN54-209ENST00000583454 CCSAPQ6IQ19 270 aaPredicted RBP29.01■■■□□ 2.23
TSEN54-209ENST00000583454 KLHDC9Q8NEP7 349 aa29.01■■■□□ 2.23
TSEN54-209ENST00000583454 LY9Q9HBG7 655 aa29.01■■■□□ 2.23
TSEN54-209ENST00000583454 PRDM5Q9NQX1 630 aaPredicted RBP29.01■■■□□ 2.23
TSEN54-209ENST00000583454 FBXO40Q9UH90 709 aa29.01■■■□□ 2.23
TSEN54-209ENST00000583454 CTDP1Q9Y5B0 961 aaPredicted RBP29.01■■■□□ 2.23
TSEN54-209ENST00000583454 CDH23Q9H251 3354 aa29.01■■■□□ 2.23
TSEN54-209ENST00000583454 CUL9Q8IWT3 2517 aa29■■■□□ 2.23
TSEN54-209ENST00000583454 SLC16A2P36021 539 aa29■■■□□ 2.23
TSEN54-209ENST00000583454 ASPRV1Q53RT3 343 aa29■■■□□ 2.23
TSEN54-209ENST00000583454 BADQ92934 168 aa29■■■□□ 2.23
TSEN54-209ENST00000583454 KATNBL1Q9H079 304 aa29■■■□□ 2.23
TSEN54-209ENST00000583454 GPHNQ9NQX3 736 aaPredicted RBP29■■■□□ 2.23
TSEN54-209ENST00000583454 CDKN2AIPQ9NXV6 580 aaPredicted RBP29■■■□□ 2.23
TSEN54-209ENST00000583454 SNX14Q9Y5W7 946 aa29■■■□□ 2.23
TSEN54-209ENST00000583454 POTEB2H3BUK9 544 aa28.99■■■□□ 2.23
TSEN54-209ENST00000583454 GOLGA8HP0CJ92 632 aa28.99■■■□□ 2.23
TSEN54-209ENST00000583454 ITGB8P26012 769 aa28.99■■■□□ 2.23
TSEN54-209ENST00000583454 EXOSC10Q01780 885 aaKnown RBP28.99■■■□□ 2.23
TSEN54-209ENST00000583454 ANKRD35Q8N283 1001 aa28.99■■■□□ 2.23
TSEN54-209ENST00000583454 TSEN34Q9BSV6 310 aaKnown RBP28.99■■■□□ 2.23
TSEN54-209ENST00000583454 ZHX1Q9UKY1 873 aaPredicted RBP28.99■■■□□ 2.23
TSEN54-209ENST00000583454 FAM184BQ9ULE4 1060 aa28.99■■■□□ 2.23
TSEN54-209ENST00000583454 WDR19Q8NEZ3 1342 aa28.98■■■□□ 2.23
TSEN54-209ENST00000583454 MYADML2A6NDP7 307 aa28.98■■■□□ 2.23
TSEN54-209ENST00000583454 SH2B2O14492 632 aaPredicted RBP28.98■■■□□ 2.23
TSEN54-209ENST00000583454 PARP1P09874 1014 aaKnown RBP28.98■■■□□ 2.23
TSEN54-209ENST00000583454 LIFRP42702 1097 aa28.98■■■□□ 2.23
TSEN54-209ENST00000583454 IRX5P78411 483 aaPredicted RBP28.98■■■□□ 2.23
TSEN54-209ENST00000583454 TROAPQ12815 778 aa28.98■■■□□ 2.23
TSEN54-209ENST00000583454 C9orf50Q5SZB4 431 aa28.98■■■□□ 2.23
TSEN54-209ENST00000583454 DHX32Q7L7V1 743 aaKnown RBP28.98■■■□□ 2.23
TSEN54-209ENST00000583454 TMTC2Q8N394 836 aa28.98■■■□□ 2.23
TSEN54-209ENST00000583454 AGBL1Q96MI9 1066 aa28.98■■■□□ 2.23
TSEN54-209ENST00000583454 RANBP17Q9H2T7 1088 aaKnown RBP28.98■■■□□ 2.23
TSEN54-209ENST00000583454 DUSP11O75319 330 aaKnown RBP28.97■■■□□ 2.23
TSEN54-209ENST00000583454 ACLYP53396 1101 aa28.97■■■□□ 2.23
TSEN54-209ENST00000583454 CNTN2Q02246 1040 aa28.97■■■□□ 2.23
TSEN54-209ENST00000583454 ACVR2BQ13705 512 aa28.97■■■□□ 2.23
TSEN54-209ENST00000583454 SHHQ15465 462 aa28.97■■■□□ 2.23
TSEN54-209ENST00000583454 FAM133AQ8N9E0 248 aa28.97■■■□□ 2.23
TSEN54-209ENST00000583454 A1CFQ9NQ94 594 aaKnown RBP28.97■■■□□ 2.23
TSEN54-209ENST00000583454 HOMER2Q9NSB8 354 aa28.97■■■□□ 2.23
TSEN54-209ENST00000583454 HMGB1P09429 215 aaKnown RBP28.96■■■□□ 2.23
TSEN54-209ENST00000583454 SNAP25P60880 206 aa28.96■■■□□ 2.23
TSEN54-209ENST00000583454 ARMCX2Q7L311 632 aa28.96■■■□□ 2.23
TSEN54-209ENST00000583454 STXBP5LQ9Y2K9 1186 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms