RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 COA7Q96BR5 231 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 TRIM17Q9Y577 477 aa18.84■□□□□ 0.61
CDK5RAP3-228ENST00000583363 H3BQV1 296 aa18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 GUCY1B3Q02153 619 aa18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 TRAF1Q13077 416 aa18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PKP1Q13835 747 aa18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 TRIM29Q14134 588 aa18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 TYW1BQ6NUM6 668 aa18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CHMP5Q9NZZ3 219 aa18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PNMA3Q9UL41 463 aa18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 KCNJ14Q9UNX9 436 aa18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 MTMR6Q9Y217 621 aa18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CTDP1Q9Y5B0 961 aaPredicted RBP18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PCDHA1Q9Y5I3 950 aa18.83■□□□□ 0.6
CDK5RAP3-228ENST00000583363 ATP2A1O14983 1001 aa18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 ICAM1P05362 532 aa18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 OAZ1P54368 228 aa18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 HERVK_113P62684 666 aa18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 NUCB2P80303 420 aa18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 MB21D1Q8N884 522 aa18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 AGBL1Q96MI9 1066 aa18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PHF20Q9BVI0 1012 aa18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 RAVER2Q9HCJ3 691 aaKnown RBP18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 ZCCHC17Q9NP64 241 aaKnown RBP18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PNMA2Q9UL42 364 aa18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 ZDHHC9Q9Y397 364 aa18.82■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PARP14Q460N5 1801 aa18.81■□□□□ 0.6
CDK5RAP3-228ENST00000583363 BRD1O95696 1058 aa18.81■□□□□ 0.6
CDK5RAP3-228ENST00000583363 NAPAP54920 295 aa18.81■□□□□ 0.6
CDK5RAP3-228ENST00000583363 NLRP5P59047 1200 aa18.81■□□□□ 0.6
CDK5RAP3-228ENST00000583363 TMEM132BQ14DG7 1078 aa18.81■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CPXCR1Q8N123 301 aa18.81■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CCDC12Q8WUD4 166 aaPredicted RBP18.81■□□□□ 0.6
CDK5RAP3-228ENST00000583363 ESYT2A0FGR8 921 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 POTEFA5A3E0 1075 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 VPS37CA5D8V6 355 aaPredicted RBP18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 SMCO2A6NFE2 343 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 MMP1P03956 469 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CYP2C8P10632 490 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CRHR2Q13324 411 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 NPY5RQ15761 445 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 USH1GQ495M9 461 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 GALNT17Q6IS24 598 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PPP1R18Q6NYC8 613 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CCDC148Q8NFR7 591 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 GTF3C2Q8WUA4 911 aaPredicted RBP18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 ZMYND12Q9H0C1 365 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 BTBD7Q9P203 1132 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 RBPJLQ9UBG7 517 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 ZNF214Q9UL59 606 aaPredicted RBP18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CCPG1Q9ULG6 757 aa18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 RBBP6Q7Z6E9 1792 aaKnown RBP18.8■□□□□ 0.6
CDK5RAP3-228ENST00000583363 ABCB11O95342 1321 aa18.79■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CNMDO75829 334 aa18.79■□□□□ 0.6
CDK5RAP3-228ENST00000583363 ZSCAN22P10073 491 aaPredicted RBP18.79■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CALML3P27482 149 aa18.79■□□□□ 0.6
CDK5RAP3-228ENST00000583363 STAT3P40763 770 aa18.79■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CAP1Q01518 475 aa18.79■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CD99L2Q8TCZ2 262 aa18.79■□□□□ 0.6
CDK5RAP3-228ENST00000583363 C6orf50Q9HD87 102 aa18.79■□□□□ 0.6
CDK5RAP3-228ENST00000583363 MRPL11Q9Y3B7 192 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-228ENST00000583363 RABGAP1Q9Y3P9 1069 aa18.79■□□□□ 0.6
CDK5RAP3-228ENST00000583363 SMCHD1A6NHR9 2005 aa18.79■□□□□ 0.6
CDK5RAP3-228ENST00000583363 BRCA2P51587 3418 aa18.78■□□□□ 0.6
CDK5RAP3-228ENST00000583363 TAL1P17542 331 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-228ENST00000583363 GNA11P29992 359 aa18.78■□□□□ 0.6
CDK5RAP3-228ENST00000583363 SAFBQ15424 915 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDK5RAP3-228ENST00000583363 ERO1AQ96HE7 468 aa18.78■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PARK7Q99497 189 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-228ENST00000583363 RIC8AQ9NPQ8 531 aa18.78■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PCDHA4Q9UN74 947 aa18.78■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PTPN22Q9Y2R2 807 aa18.78■□□□□ 0.6
CDK5RAP3-228ENST00000583363 RIPK3Q9Y572 518 aa18.78■□□□□ 0.6
CDK5RAP3-228ENST00000583363 KIAA0100Q14667 2235 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-228ENST00000583363 BTBD18B2RXH4 712 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 ADAMTS3O15072 1205 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PEX10O60683 326 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 GCLCP48506 637 aaPredicted RBP18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 MRPL12P52815 198 aaKnown RBP18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 Q3C1V9 767 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 TKFCQ3LXA3 575 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 DIS3L2Q8IYB7 885 aaKnown RBP18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 BLIDQ8IZY5 108 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 DAGLBQ8NCG7 672 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 OXER1Q8TDS5 423 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 CLEC4DQ8WXI8 215 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 TEX13BQ9BXU2 312 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 GLT8D2Q9H1C3 349 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 PSTPIP2Q9H939 334 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 TXNRD2Q9NNW7 524 aa18.77■□□□□ 0.6
CDK5RAP3-228ENST00000583363 M0R2N6 131 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 OPLAHO14841 1288 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 ALAS1P13196 640 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 U2AF2P26368 475 aaKnown RBP eCLIP18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 KRT2P35908 639 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 ADCY7P51828 1080 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 PLS1Q14651 629 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 FOXD4L5Q5VV16 416 aaPredicted RBP18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 MCTP1Q6DN14 999 aa18.76■□□□□ 0.59
CDK5RAP3-228ENST00000583363 SNRNP48Q6IEG0 339 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms