RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 STAG1Q8WVM7 1258 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 AGBL1Q96MI9 1066 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 MSRAQ9UJ68 235 aa16.12■□□□□ 0.17
SS18-222ENST00000582792 BDP1A6H8Y1 2624 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 TNFRSF10AO00220 468 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 PLA2G6O60733 806 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 FGBP02675 491 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 TFAP4Q01664 338 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 ITGA7Q13683 1181 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 FSCN1Q16658 493 aaKnown RBP16.11■□□□□ 0.17
SS18-222ENST00000582792 LRRFIP1Q32MZ4 808 aaKnown RBP16.11■□□□□ 0.17
SS18-222ENST00000582792 C20orf194Q5TEA3 1177 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 ATXN2LQ8WWM7 1075 aaKnown RBP16.11■□□□□ 0.17
SS18-222ENST00000582792 PPM1EQ8WY54 764 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 SEZ6LQ9BYH1 1024 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 NACAP1Q9BZK3 213 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 MTIF3Q9H2K0 278 aaKnown RBP16.11■□□□□ 0.17
SS18-222ENST00000582792 HIPK3Q9H422 1215 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 DCTPP1Q9H773 170 aa16.11■□□□□ 0.17
SS18-222ENST00000582792 CXXC1Q9P0U4 656 aaPredicted RBP16.11■□□□□ 0.17
SS18-222ENST00000582792 ISY1Q9ULR0 285 aaKnown RBP16.11■□□□□ 0.17
SS18-222ENST00000582792 SLC3A2P08195 630 aaKnown RBP16.1■□□□□ 0.17
SS18-222ENST00000582792 SMPD1P17405 629 aa16.1■□□□□ 0.17
SS18-222ENST00000582792 SLC1A4P43007 532 aa16.1■□□□□ 0.17
SS18-222ENST00000582792 IKQ13123 557 aaPredicted RBP16.1■□□□□ 0.17
SS18-222ENST00000582792 ADGRE1Q14246 886 aa16.1■□□□□ 0.17
SS18-222ENST00000582792 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
SS18-222ENST00000582792 AP5M1Q9H0R1 490 aa16.1■□□□□ 0.17
SS18-222ENST00000582792 THEGQ9P2T0 379 aa16.1■□□□□ 0.17
SS18-222ENST00000582792 GRIN2DO15399 1336 aa16.1■□□□□ 0.17
SS18-222ENST00000582792 UMODL1Q5DID0 1318 aa16.1■□□□□ 0.17
SS18-222ENST00000582792 GBF1Q92538 1859 aa16.1■□□□□ 0.17
SS18-222ENST00000582792 XIRP2A4UGR9 3374 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 MYO9BQ13459 2157 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 DYNC1LI2O43237 492 aaPredicted RBP16.09■□□□□ 0.17
SS18-222ENST00000582792 ZEB2O60315 1214 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 ALAS1P13196 640 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 MCCP23508 829 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 PPARAQ07869 468 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 PPP4R3BQ5MIZ7 849 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 IQSEC1Q6DN90 963 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 SEC62Q99442 399 aaKnown RBP16.09■□□□□ 0.17
SS18-222ENST00000582792 NAPBQ9H115 298 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 NKX2-4Q9H2Z4 354 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 SLC28A3Q9HAS3 691 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 PDGFCQ9NRA1 345 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 CYP39A1Q9NYL5 469 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 Q9Y3F1 56 aa16.09■□□□□ 0.17
SS18-222ENST00000582792 PTGS1P23219 599 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 CCL23P55773 120 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 MUM1L1Q5H9M0 696 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 RCSD1Q6JBY9 416 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 TAPT1Q6NXT6 567 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 OTOP2Q7RTS6 562 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 CHMP4CQ96CF2 233 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 ASB2Q96Q27 587 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 NOC4LQ9BVI4 516 aaKnown RBP16.08■□□□□ 0.16
SS18-222ENST00000582792 TRPV6Q9H1D0 765 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 WNT8AQ9H1J5 351 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 PRR12Q9ULL5 1215 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 STX8Q9UNK0 236 aa16.08■□□□□ 0.16
SS18-222ENST00000582792 YBX2Q9Y2T7 364 aaKnown RBP16.08■□□□□ 0.16
SS18-222ENST00000582792 DDX49Q9Y6V7 483 aaKnown RBP16.08■□□□□ 0.16
SS18-222ENST00000582792 B4GALT4O60513 344 aa16.07■□□□□ 0.16
SS18-222ENST00000582792 IGFBP4P22692 258 aa16.07■□□□□ 0.16
SS18-222ENST00000582792 AAMPQ13685 434 aa16.07■□□□□ 0.16
SS18-222ENST00000582792 KCTD1Q719H9 257 aa16.07■□□□□ 0.16
SS18-222ENST00000582792 EEPD1Q7L9B9 569 aa16.07■□□□□ 0.16
SS18-222ENST00000582792 FBXO16Q8IX29 292 aaPredicted RBP16.07■□□□□ 0.16
SS18-222ENST00000582792 MORC4Q8TE76 937 aa16.07■□□□□ 0.16
SS18-222ENST00000582792 VTA1Q9NP79 307 aa16.07■□□□□ 0.16
SS18-222ENST00000582792 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
SS18-222ENST00000582792 SUPT16HQ9Y5B9 1047 aaKnown RBP16.07■□□□□ 0.16
SS18-222ENST00000582792 TTC41PQ6P2S7 1318 aa16.07■□□□□ 0.16
SS18-222ENST00000582792 LCTP09848 1927 aa16.07■□□□□ 0.16
SS18-222ENST00000582792 TSPY2A6NKD2 308 aa16.06■□□□□ 0.16
SS18-222ENST00000582792 SNAP25P60880 206 aa16.06■□□□□ 0.16
SS18-222ENST00000582792 PSMC6P62333 389 aa16.06■□□□□ 0.16
SS18-222ENST00000582792 MRPS5P82675 430 aaKnown RBP16.06■□□□□ 0.16
SS18-222ENST00000582792 CCDC85BQ15834 202 aaPredicted RBP16.06■□□□□ 0.16
SS18-222ENST00000582792 ZMYM1Q5SVZ6 1142 aa16.06■□□□□ 0.16
SS18-222ENST00000582792 TMEM63BQ5T3F8 832 aa16.06■□□□□ 0.16
SS18-222ENST00000582792 RPUSD2Q8IZ73 545 aaKnown RBP16.06■□□□□ 0.16
SS18-222ENST00000582792 PI4K2BQ8TCG2 481 aa16.06■□□□□ 0.16
SS18-222ENST00000582792 IL17RBQ9NRM6 502 aa16.06■□□□□ 0.16
SS18-222ENST00000582792 CCPG1Q9ULG6 757 aa16.06■□□□□ 0.16
SS18-222ENST00000582792 ERC2O15083 957 aa16.05■□□□□ 0.16
SS18-222ENST00000582792 FOXP2O15409 715 aa16.05■□□□□ 0.16
SS18-222ENST00000582792 NMT2O60551 498 aa16.05■□□□□ 0.16
SS18-222ENST00000582792 ICAM1P05362 532 aa16.05■□□□□ 0.16
SS18-222ENST00000582792 NSMFQ6X4W1 530 aa16.05■□□□□ 0.16
SS18-222ENST00000582792 KIAA1211Q6ZU35 1233 aa16.05■□□□□ 0.16
SS18-222ENST00000582792 RASGRP2Q7LDG7 609 aa16.05■□□□□ 0.16
SS18-222ENST00000582792 ADAMTS19Q8TE59 1207 aa16.05■□□□□ 0.16
SS18-222ENST00000582792 VWCEQ96DN2 955 aa16.05■□□□□ 0.16
SS18-222ENST00000582792 PURBQ96QR8 312 aaKnown RBP16.05■□□□□ 0.16
SS18-222ENST00000582792 FSD1Q9BTV5 496 aa16.05■□□□□ 0.16
SS18-222ENST00000582792 ALDH8A1Q9H2A2 487 aaPredicted RBP16.05■□□□□ 0.16
SS18-222ENST00000582792 SLC4A7Q9Y6M7 1214 aa16.05■□□□□ 0.16
SS18-222ENST00000582792 NCOR1O75376 2440 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms