RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 POTEDQ86YR6 584 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 TMEM139Q8IV31 216 aa15.38■□□□□ 0.05
SRSF1-205ENST00000582730 ADD3Q9UEY8 706 aaKnown RBP15.38■□□□□ 0.05
SRSF1-205ENST00000582730 LAD1O00515 517 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 ADCY7P51828 1080 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 KRT31Q15323 416 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 ASPRV1Q53RT3 343 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 KCTD1Q719H9 257 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 RWDD2AQ9UIY3 292 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 SUGT1Q9Y2Z0 365 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 VGLL3A8MV65 326 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 CRKP46108 304 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 ETF1P62495 437 aaKnown RBP15.37■□□□□ 0.05
SRSF1-205ENST00000582730 APTXQ7Z2E3 356 aaKnown RBP15.37■□□□□ 0.05
SRSF1-205ENST00000582730 C2CD5Q86YS7 1000 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 EEF2KMTQ96G04 330 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 STX10O60499 249 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 H2AFXP16104 143 aaPredicted RBP15.37■□□□□ 0.05
SRSF1-205ENST00000582730 BMS1Q14692 1282 aaKnown RBP15.37■□□□□ 0.05
SRSF1-205ENST00000582730 MTF1Q14872 753 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 ZFPM1Q8IX07 1006 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 LRRN4CLQ8ND94 238 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 RIOX1Q9H6W3 641 aa15.37■□□□□ 0.05
SRSF1-205ENST00000582730 KCNJ18B7U540 433 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 SHMT1P34896 483 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 ASIC1P78348 528 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 KCNJ12Q14500 433 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 UBE2SQ16763 222 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 TRIM34Q9BYJ4 488 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 CCSER1Q9C0I3 900 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 CALCOCO1Q9P1Z2 691 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 SOWAHDA6NJG2 315 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 TPM1P09493 284 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 STIM1Q13586 685 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 APOBEC3HQ6NTF7 200 aaKnown RBP15.36■□□□□ 0.05
SRSF1-205ENST00000582730 REXO1L1PQ8IX06 675 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 TRIM47Q96LD4 638 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 L2HGDHQ9H9P8 463 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 SWAP70Q9UH65 585 aa15.36■□□□□ 0.05
SRSF1-205ENST00000582730 URI1O94763 535 aaPredicted RBP15.35■□□□□ 0.05
SRSF1-205ENST00000582730 CASP14P31944 242 aa15.35■□□□□ 0.05
SRSF1-205ENST00000582730 PRPHP41219 470 aa15.35■□□□□ 0.05
SRSF1-205ENST00000582730 CALCRLQ16602 461 aa15.35■□□□□ 0.05
SRSF1-205ENST00000582730 UIMC1Q96RL1 719 aa15.35■□□□□ 0.05
SRSF1-205ENST00000582730 MARCH6O60337 910 aa15.35■□□□□ 0.05
SRSF1-205ENST00000582730 TDP2O95551 362 aa15.35■□□□□ 0.05
SRSF1-205ENST00000582730 GNG11P61952 73 aa15.35■□□□□ 0.05
SRSF1-205ENST00000582730 ADGRF4Q8IZF3 695 aa15.35■□□□□ 0.05
SRSF1-205ENST00000582730 LRRC15Q8TF66 581 aa15.35■□□□□ 0.05
SRSF1-205ENST00000582730 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
SRSF1-205ENST00000582730 ANKRD31Q8N7Z5 1873 aa15.35■□□□□ 0.05
SRSF1-205ENST00000582730 COPB1P53618 953 aaKnown RBP15.34■□□□□ 0.05
SRSF1-205ENST00000582730 SPAG1Q07617 926 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 ZNF543Q08ER8 600 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 SHROOM1Q2M3G4 852 aaPredicted RBP15.34■□□□□ 0.05
SRSF1-205ENST00000582730 CCDC47Q96A33 483 aaKnown RBP15.34■□□□□ 0.05
SRSF1-205ENST00000582730 CALML4Q96GE6 196 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 CDK5RAP3Q96JB5 506 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 FHOD1Q9Y613 1164 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 PSMA7O14818 248 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 SMARCA1P28370 1054 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 CLCN6P51797 869 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 FAM193AP78312 1265 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 PDE4DQ08499 809 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 TCP11X2Q5H9J9 407 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 FCHSD1Q86WN1 690 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 NUP88Q99567 741 aaPredicted RBP15.34■□□□□ 0.05
SRSF1-205ENST00000582730 JMJD4Q9H9V9 463 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 EXOC1Q9NV70 894 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 USP17L10C9JJH3 530 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 CHRNA5P30532 468 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 PMS1P54277 932 aaKnown RBP15.34■□□□□ 0.05
SRSF1-205ENST00000582730 UBXN1Q04323 297 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 HHIPL2Q6UWX4 724 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 AK8Q96MA6 479 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 KBTBD4Q9NVX7 518 aa15.34■□□□□ 0.05
SRSF1-205ENST00000582730 H0YIN7 160 aa15.33■□□□□ 0.05
SRSF1-205ENST00000582730 SLC37A4O43826 429 aa15.33■□□□□ 0.05
SRSF1-205ENST00000582730 CYP2C19P33261 490 aa15.33■□□□□ 0.05
SRSF1-205ENST00000582730 LZTFL1Q9NQ48 299 aa15.33■□□□□ 0.05
SRSF1-205ENST00000582730 LRWD1Q9UFC0 647 aa15.33■□□□□ 0.05
SRSF1-205ENST00000582730 LRRC37AA6NMS7 1700 aa15.33■□□□□ 0.04
SRSF1-205ENST00000582730 ADAMTSL1Q8N6G6 1762 aa15.33■□□□□ 0.04
SRSF1-205ENST00000582730 PLIN4Q96Q06 1357 aa15.33■□□□□ 0.04
SRSF1-205ENST00000582730 IGKV6D-41A0A0C4DH26 115 aa15.33■□□□□ 0.04
SRSF1-205ENST00000582730 HMGB2P26583 209 aaKnown RBP15.33■□□□□ 0.04
SRSF1-205ENST00000582730 NOVP48745 357 aa15.33■□□□□ 0.04
SRSF1-205ENST00000582730 FXR1P51114 621 aaKnown RBP eCLIP15.33■□□□□ 0.04
SRSF1-205ENST00000582730 TMEM266Q2M3C6 531 aa15.33■□□□□ 0.04
SRSF1-205ENST00000582730 PODNQ7Z5L7 613 aa15.33■□□□□ 0.04
SRSF1-205ENST00000582730 ADSSL1Q8N142 457 aa15.33■□□□□ 0.04
SRSF1-205ENST00000582730 SRRTQ9BXP5 876 aaKnown RBP15.33■□□□□ 0.04
SRSF1-205ENST00000582730 MAGEC2Q9UBF1 373 aaPredicted RBP15.33■□□□□ 0.04
SRSF1-205ENST00000582730 LTBP1Q14766 1721 aa15.33■□□□□ 0.04
SRSF1-205ENST00000582730 ESYT2A0FGR8 921 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 POTEMA6NI47 508 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 ECE2O60344 883 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 MFAP3LO75121 409 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 GYPCP04921 128 aa15.32■□□□□ 0.04
SRSF1-205ENST00000582730 CCDC93Q567U6 631 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms