RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 TLK2Q86UE8 772 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 FAM126BQ8IXS8 530 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 KATNBL1Q9H079 304 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 VTA1Q9NP79 307 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 HELLSQ9NRZ9 838 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 PRR12Q9ULL5 1215 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 PCDHB15Q9Y5E8 787 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 ZNF536O15090 1300 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 EYSQ5T1H1 3165 aa17.2■□□□□ 0.34
CDC42EP4-208ENST00000582303 ADCY6O43306 1168 aa17.19■□□□□ 0.34
CDC42EP4-208ENST00000582303 ALX1Q15699 326 aa17.19■□□□□ 0.34
CDC42EP4-208ENST00000582303 ZNF576Q9H609 170 aa17.19■□□□□ 0.34
CDC42EP4-208ENST00000582303 TOMM22Q9NS69 142 aa17.19■□□□□ 0.34
CDC42EP4-208ENST00000582303 CYP39A1Q9NYL5 469 aa17.19■□□□□ 0.34
CDC42EP4-208ENST00000582303 SOWAHBA6NEL2 793 aa17.18■□□□□ 0.34
CDC42EP4-208ENST00000582303 PCP11498 1178 aaKnown RBP17.18■□□□□ 0.34
CDC42EP4-208ENST00000582303 CSF2RAP15509 400 aa17.18■□□□□ 0.34
CDC42EP4-208ENST00000582303 CTDSPL2Q05D32 466 aa17.18■□□□□ 0.34
CDC42EP4-208ENST00000582303 ANKRD45Q5TZF3 282 aa17.18■□□□□ 0.34
CDC42EP4-208ENST00000582303 NSMFQ6X4W1 530 aa17.18■□□□□ 0.34
CDC42EP4-208ENST00000582303 GAS2L1Q99501 681 aaPredicted RBP17.18■□□□□ 0.34
CDC42EP4-208ENST00000582303 PPP1R12CQ9BZL4 782 aa17.18■□□□□ 0.34
CDC42EP4-208ENST00000582303 IL17RBQ9NRM6 502 aa17.18■□□□□ 0.34
CDC42EP4-208ENST00000582303 GNEQ9Y223 722 aaKnown RBP17.18■□□□□ 0.34
CDC42EP4-208ENST00000582303 B4DLN1 442 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 DYNC1LI2O43237 492 aaPredicted RBP17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 CD4P01730 458 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 TOP1P11387 765 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 NOVP48745 357 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 NT5C2P49902 561 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 MRPL12P52815 198 aaKnown RBP17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 BEX3Q00994 111 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 ITGA7Q13683 1181 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 RAB30Q15771 203 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 BRDTQ58F21 947 aaPredicted RBP17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 TMEM240Q5SV17 173 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 CXCL17Q6UXB2 119 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 SLC43A3Q8NBI5 491 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 OTUD7AQ8TE49 926 aaPredicted RBP17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 HIPK3Q9H422 1215 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 IL23AQ9NPF7 189 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 MSRAQ9UJ68 235 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 MYH4Q9Y623 1939 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 PRUNE2Q8WUY3 3088 aa17.17■□□□□ 0.34
CDC42EP4-208ENST00000582303 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 CTAGE5O15320 804 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 FGRP09769 529 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 SUPT20HL2P0C7V6 817 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 MFAP1P55081 439 aaKnown RBP17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 MCMDC2Q4G0Z9 681 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 RASIP1Q5U651 963 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 BTNL9Q6UXG8 535 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 KIAA1211Q6ZU35 1233 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 RPUSD2Q8IZ73 545 aaKnown RBP17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 RANBP17Q9H2T7 1088 aaKnown RBP17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 TCP11L1Q9NUJ3 509 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 POLR3EQ9NVU0 708 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 MTMR7Q9Y216 660 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 ZMYM6O95789 1325 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 RAD50Q92878 1312 aa17.16■□□□□ 0.34
CDC42EP4-208ENST00000582303 NMT2O60551 498 aa17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 FGBP02675 491 aa17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 SMPD1P17405 629 aa17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 CPT1AP50416 773 aa17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 IRX5P78411 483 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 GRIN2CQ14957 1233 aa17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 MUM1L1Q5H9M0 696 aa17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 SYDE2Q5VT97 1194 aa17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 ZNF365Q70YC5 407 aa17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 FBXO16Q8IX29 292 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 MORC4Q8TE76 937 aa17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 HERVK_113Q902F9 699 aa17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 TTC14Q96N46 770 aa17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 RNF41Q9H4P4 317 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 GPHNQ9NQX3 736 aaPredicted RBP17.15■□□□□ 0.34
CDC42EP4-208ENST00000582303 FOXP2O15409 715 aa17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 CYP2C18P33260 490 aa17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 PDE1AP54750 535 aa17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 AAMPQ13685 434 aa17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 DUSP28Q4G0W2 176 aa17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 RRP12Q5JTH9 1297 aaKnown RBP17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 TAPT1Q6NXT6 567 aa17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 C16orf59Q7L2K0 433 aa17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 EEPD1Q7L9B9 569 aa17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 CHMP4CQ96CF2 233 aa17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 PBX4Q9BYU1 374 aa17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.33
CDC42EP4-208ENST00000582303 PTPDC1A2A3K4 754 aa17.13■□□□□ 0.33
CDC42EP4-208ENST00000582303 NKRFO15226 690 aaKnown RBP eCLIP17.13■□□□□ 0.33
CDC42EP4-208ENST00000582303 FGAP02671 866 aa17.13■□□□□ 0.33
CDC42EP4-208ENST00000582303 PFKMP08237 780 aa17.13■□□□□ 0.33
CDC42EP4-208ENST00000582303 ACRP10323 421 aa17.13■□□□□ 0.33
CDC42EP4-208ENST00000582303 RRP1P56182 461 aaKnown RBP17.13■□□□□ 0.33
CDC42EP4-208ENST00000582303 SNAP25P60880 206 aa17.13■□□□□ 0.33
CDC42EP4-208ENST00000582303 HDAC1Q13547 482 aaPredicted RBP17.13■□□□□ 0.33
CDC42EP4-208ENST00000582303 BAATQ14032 418 aaPredicted RBP17.13■□□□□ 0.33
CDC42EP4-208ENST00000582303 VPS53Q5VIR6 699 aa17.13■□□□□ 0.33
CDC42EP4-208ENST00000582303 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
CDC42EP4-208ENST00000582303 TMEM47Q9BQJ4 181 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms