RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 LSRQ86X29 649 aaPredicted RBP6.65□□□□□ -1.34
TTC39C-207ENST00000581394 JAMLQ86YT9 394 aa6.65□□□□□ -1.34
TTC39C-207ENST00000581394 SLC9A7Q96T83 725 aa6.65□□□□□ -1.34
TTC39C-207ENST00000581394 PDLIM7Q9NR12 457 aa6.65□□□□□ -1.34
TTC39C-207ENST00000581394 USP40Q9NVE5 1235 aa6.65□□□□□ -1.34
TTC39C-207ENST00000581394 UBP1Q9NZI7 540 aa6.65□□□□□ -1.34
TTC39C-207ENST00000581394 CWF19L1Q69YN2 538 aaKnown RBP6.64□□□□□ -1.35
TTC39C-207ENST00000581394 SLITRK4Q8IW52 837 aa6.64□□□□□ -1.35
TTC39C-207ENST00000581394 DHRS1Q96LJ7 313 aa6.64□□□□□ -1.35
TTC39C-207ENST00000581394 GPR20Q99678 358 aa6.64□□□□□ -1.35
TTC39C-207ENST00000581394 SPATA25Q9BR10 227 aa6.64□□□□□ -1.35
TTC39C-207ENST00000581394 ADAMTS1Q9UHI8 967 aa6.64□□□□□ -1.35
TTC39C-207ENST00000581394 HCFC2Q9Y5Z7 792 aa6.64□□□□□ -1.35
TTC39C-207ENST00000581394 A0A1B0GTL3 188 aa6.63□□□□□ -1.35
TTC39C-207ENST00000581394 C9IYK1 514 aa6.63□□□□□ -1.35
TTC39C-207ENST00000581394 MCM4P33991 863 aa6.63□□□□□ -1.35
TTC39C-207ENST00000581394 DLX2Q07687 328 aaPredicted RBP6.63□□□□□ -1.35
TTC39C-207ENST00000581394 APOBRQ0VD83 1088 aa6.63□□□□□ -1.35
TTC39C-207ENST00000581394 PUM1Q14671 1186 aaKnown RBP eCLIP6.63□□□□□ -1.35
TTC39C-207ENST00000581394 ZNF827Q17R98 1081 aa6.63□□□□□ -1.35
TTC39C-207ENST00000581394 ANKRD39Q53RE8 183 aa6.63□□□□□ -1.35
TTC39C-207ENST00000581394 BICRALQ6AI39 1079 aa6.63□□□□□ -1.35
TTC39C-207ENST00000581394 ADGRG2Q8IZP9 1017 aa6.63□□□□□ -1.35
TTC39C-207ENST00000581394 NLGN2Q8NFZ4 835 aa6.63□□□□□ -1.35
TTC39C-207ENST00000581394 PALD1Q9ULE6 856 aa6.63□□□□□ -1.35
TTC39C-207ENST00000581394 PLA2G2DQ9UNK4 145 aa6.63□□□□□ -1.35
TTC39C-207ENST00000581394 A0A1W2PQJ5 194 aa6.62□□□□□ -1.35
TTC39C-207ENST00000581394 H0Y8X5 98 aa6.62□□□□□ -1.35
TTC39C-207ENST00000581394 NCAM1P13591 858 aa6.62□□□□□ -1.35
TTC39C-207ENST00000581394 PRR5P85299 388 aa6.62□□□□□ -1.35
TTC39C-207ENST00000581394 FERMT3Q86UX7 667 aa6.62□□□□□ -1.35
TTC39C-207ENST00000581394 CCDC144CPQ8IYA2 1237 aa6.62□□□□□ -1.35
TTC39C-207ENST00000581394 ZNF526Q8TF50 670 aaPredicted RBP6.62□□□□□ -1.35
TTC39C-207ENST00000581394 SMARCC1Q92922 1105 aaPredicted RBP6.62□□□□□ -1.35
TTC39C-207ENST00000581394 NT5C1AQ9BXI3 368 aa6.62□□□□□ -1.35
TTC39C-207ENST00000581394 ACRP10323 421 aa6.61□□□□□ -1.35
TTC39C-207ENST00000581394 MAGEA10P43363 369 aaPredicted RBP6.61□□□□□ -1.35
TTC39C-207ENST00000581394 NOP2P46087 812 aaKnown RBP6.61□□□□□ -1.35
TTC39C-207ENST00000581394 PMS1P54277 932 aaKnown RBP6.61□□□□□ -1.35
TTC39C-207ENST00000581394 HS2ST1Q7LGA3 356 aa6.61□□□□□ -1.35
TTC39C-207ENST00000581394 NKD1Q969G9 470 aa6.61□□□□□ -1.35
TTC39C-207ENST00000581394 GGT7Q9UJ14 662 aa6.61□□□□□ -1.35
TTC39C-207ENST00000581394 FAN1Q9Y2M0 1017 aa6.61□□□□□ -1.35
TTC39C-207ENST00000581394 F8W031 263 aaPredicted RBP6.6□□□□□ -1.35
TTC39C-207ENST00000581394 NOBOXO60393 691 aa6.6□□□□□ -1.35
TTC39C-207ENST00000581394 ASGR2P07307 311 aa6.6□□□□□ -1.35
TTC39C-207ENST00000581394 B3GNT8Q7Z7M8 397 aa6.6□□□□□ -1.35
TTC39C-207ENST00000581394 CARFQ8N187 725 aa6.6□□□□□ -1.35
TTC39C-207ENST00000581394 TAB3Q8N5C8 712 aaPredicted RBP6.6□□□□□ -1.35
TTC39C-207ENST00000581394 FHOD1Q9Y613 1164 aa6.6□□□□□ -1.35
TTC39C-207ENST00000581394 ERCC3P19447 782 aa6.59□□□□□ -1.35
TTC39C-207ENST00000581394 MC3RP41968 323 aa6.59□□□□□ -1.35
TTC39C-207ENST00000581394 ZNF445P59923 1031 aa6.59□□□□□ -1.35
TTC39C-207ENST00000581394 ADAM17P78536 824 aa6.59□□□□□ -1.35
TTC39C-207ENST00000581394 PTCHD1Q96NR3 888 aa6.59□□□□□ -1.35
TTC39C-207ENST00000581394 FCRL3Q96P31 734 aaPredicted RBP6.59□□□□□ -1.35
TTC39C-207ENST00000581394 LNPKQ9C0E8 428 aa6.59□□□□□ -1.35
TTC39C-207ENST00000581394 GP6Q9HCN6 339 aa6.59□□□□□ -1.35
TTC39C-207ENST00000581394 DUSP10Q9Y6W6 482 aa6.59□□□□□ -1.35
TTC39C-207ENST00000581394 TBC1D8O95759 1140 aa6.58□□□□□ -1.36
TTC39C-207ENST00000581394 ITGB3P05106 788 aa6.58□□□□□ -1.36
TTC39C-207ENST00000581394 GLI4P10075 376 aa6.58□□□□□ -1.36
TTC39C-207ENST00000581394 TACR1P25103 407 aa6.58□□□□□ -1.36
TTC39C-207ENST00000581394 L1CAMP32004 1257 aa6.58□□□□□ -1.36
TTC39C-207ENST00000581394 CNR2P34972 360 aa6.58□□□□□ -1.36
TTC39C-207ENST00000581394 PPFIBP1Q86W92 1011 aa6.58□□□□□ -1.36
TTC39C-207ENST00000581394 ALG3Q92685 438 aa6.58□□□□□ -1.36
TTC39C-207ENST00000581394 TSPAN17Q96FV3 270 aa6.58□□□□□ -1.36
TTC39C-207ENST00000581394 DBR1Q9UK59 544 aaKnown RBP6.58□□□□□ -1.36
TTC39C-207ENST00000581394 ZNRF3Q9ULT6 936 aa6.58□□□□□ -1.36
TTC39C-207ENST00000581394 IMPDH2P12268 514 aa6.57□□□□□ -1.36
TTC39C-207ENST00000581394 TNFRSF1AP19438 455 aa6.57□□□□□ -1.36
TTC39C-207ENST00000581394 GJA9P57773 515 aa6.57□□□□□ -1.36
TTC39C-207ENST00000581394 NOL9Q5SY16 702 aaKnown RBP6.57□□□□□ -1.36
TTC39C-207ENST00000581394 AXDND1Q5T1B0 1012 aaPredicted RBP6.57□□□□□ -1.36
TTC39C-207ENST00000581394 DCAF15Q66K64 600 aa6.57□□□□□ -1.36
TTC39C-207ENST00000581394 RGS22Q8NE09 1264 aa6.57□□□□□ -1.36
TTC39C-207ENST00000581394 RBM15Q96T37 977 aaKnown RBP eCLIP6.57□□□□□ -1.36
TTC39C-207ENST00000581394 FAM86C2PA6NEL3 165 aa6.56□□□□□ -1.36
TTC39C-207ENST00000581394 CD247P20963 164 aa6.56□□□□□ -1.36
TTC39C-207ENST00000581394 TDRD10Q5VZ19 366 aaKnown RBP6.56□□□□□ -1.36
TTC39C-207ENST00000581394 FIBCD1Q8N539 461 aa6.56□□□□□ -1.36
TTC39C-207ENST00000581394 CPA5Q8WXQ8 436 aa6.56□□□□□ -1.36
TTC39C-207ENST00000581394 DDX1Q92499 740 aaKnown RBP6.56□□□□□ -1.36
TTC39C-207ENST00000581394 BRF1Q92994 677 aa6.56□□□□□ -1.36
TTC39C-207ENST00000581394 SMPD4Q9NXE4 827 aa6.56□□□□□ -1.36
TTC39C-207ENST00000581394 SF3B6Q9Y3B4 125 aaKnown RBP6.56□□□□□ -1.36
TTC39C-207ENST00000581394 A0A087WZG4 1122 aa6.55□□□□□ -1.36
TTC39C-207ENST00000581394 IFNGR1P15260 489 aa6.55□□□□□ -1.36
TTC39C-207ENST00000581394 PMLP29590 882 aa6.55□□□□□ -1.36
TTC39C-207ENST00000581394 POU4F1Q01851 419 aa6.55□□□□□ -1.36
TTC39C-207ENST00000581394 TRIM26Q12899 539 aaPredicted RBP6.55□□□□□ -1.36
TTC39C-207ENST00000581394 TM9SF2Q99805 663 aa6.55□□□□□ -1.36
TTC39C-207ENST00000581394 C1QTNF3-AMACRE9PGA6 284 aa6.54□□□□□ -1.36
TTC39C-207ENST00000581394 AKAP8O43823 692 aaKnown RBP6.54□□□□□ -1.36
TTC39C-207ENST00000581394 CD3EP07766 207 aa6.54□□□□□ -1.36
TTC39C-207ENST00000581394 SARSP49591 514 aaKnown RBP6.54□□□□□ -1.36
TTC39C-207ENST00000581394 MRPL58Q14197 206 aaKnown RBP6.54□□□□□ -1.36
TTC39C-207ENST00000581394 RCSD1Q6JBY9 416 aa6.54□□□□□ -1.36
TTC39C-207ENST00000581394 USP48Q86UV5 1035 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms