RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 CEP95Q96GE4 821 aa10.44□□□□□ -0.74
NUP85-217ENST00000581335 SEC62Q99442 399 aaKnown RBP10.44□□□□□ -0.74
NUP85-217ENST00000581335 TEX13BQ9BXU2 312 aa10.44□□□□□ -0.74
NUP85-217ENST00000581335 PRDM5Q9NQX1 630 aaPredicted RBP10.44□□□□□ -0.74
NUP85-217ENST00000581335 MTMR4Q9NYA4 1195 aa10.44□□□□□ -0.74
NUP85-217ENST00000581335 PHF24Q9UPV7 400 aa10.44□□□□□ -0.74
NUP85-217ENST00000581335 CTDP1Q9Y5B0 961 aaPredicted RBP10.44□□□□□ -0.74
NUP85-217ENST00000581335 DNAJC25-GNG10A0A024R161 153 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 PRDM1O75626 825 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 SNAI1O95863 264 aaPredicted RBP10.43□□□□□ -0.74
NUP85-217ENST00000581335 TTLL1O95922 423 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 PGK1P00558 417 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 SLC4A3P48751 1232 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 PDE4BQ07343 736 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 MAMDC4Q6UXC1 1216 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 SH3RF1Q7Z6J0 888 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 CPXCR1Q8N123 301 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 PI4K2BQ8TCG2 481 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 BADQ92934 168 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 KIFC2Q96AC6 838 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 TSEN34Q9BSV6 310 aaKnown RBP10.43□□□□□ -0.74
NUP85-217ENST00000581335 NACAP1Q9BZK3 213 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 PDLIM7Q9NR12 457 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 FEM1BQ9UK73 627 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 SYNPO2Q9UMS6 1093 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 CNPY2Q9Y2B0 182 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 PCDHB15Q9Y5E8 787 aa10.43□□□□□ -0.74
NUP85-217ENST00000581335 SYNGAP1Q96PV0 1343 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 A0A1W2PQ45 241 aaPredicted RBP10.42□□□□□ -0.74
NUP85-217ENST00000581335 A0A1W2PQY0 241 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 TRIM43BA6NCK2 446 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 PPP1R3GB7ZBB8 358 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 DLL1O00548 723 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 SLC3A2P08195 630 aaKnown RBP10.42□□□□□ -0.74
NUP85-217ENST00000581335 TSPY3P0CV98 308 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 TSPY8P0CW00 308 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 OAZ1P54368 228 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 TLE2Q04725 743 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 SHHQ15465 462 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 GMCL1P1Q8NEA9 526 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 NEDD1Q8NHV4 660 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 TRIM43Q96BQ3 446 aaPredicted RBP10.42□□□□□ -0.74
NUP85-217ENST00000581335 SLC38A10Q9HBR0 1119 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 RAVER2Q9HCJ3 691 aaKnown RBP10.42□□□□□ -0.74
NUP85-217ENST00000581335 PLSCR2Q9NRY7 297 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 FAM184BQ9ULE4 1060 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 TACC3Q9Y6A5 838 aa10.42□□□□□ -0.74
NUP85-217ENST00000581335 PLIN4Q96Q06 1357 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 MOXD2PA6NHM9 499 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 ADAMTS4O75173 837 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 CLTBP09497 229 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 FDX1P10109 184 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 BMP3P12645 472 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 TFAP4Q01664 338 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 PPARAQ07869 468 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 ZMYM1Q5SVZ6 1142 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 C9orf50Q5SZB4 431 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 SLFN13Q68D06 897 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 NUDT18Q6ZVK8 323 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 LRRC47Q8N1G4 583 aaKnown RBP10.41□□□□□ -0.74
NUP85-217ENST00000581335 ANKRD35Q8N283 1001 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 KLHDC9Q8NEP7 349 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 CHST13Q8NET6 341 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 OTUD7AQ8TE49 926 aaPredicted RBP10.41□□□□□ -0.74
NUP85-217ENST00000581335 LENG1Q96BZ8 264 aaPredicted RBP10.41□□□□□ -0.74
NUP85-217ENST00000581335 FSD1Q9BTV5 496 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 NAPBQ9H115 298 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 TMEM134Q9H6X4 195 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 FBXO40Q9UH90 709 aa10.41□□□□□ -0.74
NUP85-217ENST00000581335 SYNRGQ9UMZ2 1314 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 MCM3APO60318 1980 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 TMEM232C9JQI7 657 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 KIAA0355O15063 1070 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 LILRB3O75022 631 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 DUSP11O75319 330 aaKnown RBP10.4□□□□□ -0.74
NUP85-217ENST00000581335 MX1P20591 662 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 DNAJB2P25686 324 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 ITGB8P26012 769 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 ACLYP53396 1101 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 ACVR2BQ13705 512 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 KCNA10Q16322 511 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 ZNF697Q5TEC3 545 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 CCSAPQ6IQ19 270 aaPredicted RBP10.4□□□□□ -0.74
NUP85-217ENST00000581335 CHURC1Q8WUH1 139 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 NUP133Q8WUM0 1156 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 GUCD1Q96NT3 240 aa10.4□□□□□ -0.74
NUP85-217ENST00000581335 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.4□□□□□ -0.74
NUP85-217ENST00000581335 ZHX1Q9UKY1 873 aaPredicted RBP10.4□□□□□ -0.74
NUP85-217ENST00000581335 LAMA2P24043 3122 aaKnown RBP10.4□□□□□ -0.75
NUP85-217ENST00000581335 SALL3Q9BXA9 1300 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 PLA2G6O60733 806 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 PQBP1O60828 265 aaKnown RBP10.39□□□□□ -0.75
NUP85-217ENST00000581335 RAG1P15918 1043 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 STAT2P52630 851 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 FAAP100Q0VG06 881 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 ANKRD33Q7Z3H0 272 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 FAM160B2Q86V87 743 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 STAG1Q8WVM7 1258 aa10.39□□□□□ -0.75
NUP85-217ENST00000581335 TATDN2Q93075 761 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms