RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.59■■□□□ 1.53
SNX11-207ENST00000580875 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.59■■□□□ 1.53
SNX11-207ENST00000580875 FGRP09769 529 aa24.59■■□□□ 1.53
SNX11-207ENST00000580875 PPIGQ13427 754 aaKnown RBP eCLIP24.59■■□□□ 1.53
SNX11-207ENST00000580875 ALX1Q15699 326 aa24.59■■□□□ 1.53
SNX11-207ENST00000580875 MUM1L1Q5H9M0 696 aa24.59■■□□□ 1.53
SNX11-207ENST00000580875 RASGRP2Q7LDG7 609 aa24.59■■□□□ 1.53
SNX11-207ENST00000580875 FAM126BQ8IXS8 530 aa24.59■■□□□ 1.53
SNX11-207ENST00000580875 DCAF4Q8WV16 495 aa24.59■■□□□ 1.53
SNX11-207ENST00000580875 MYLIPQ8WY64 445 aa24.59■■□□□ 1.53
SNX11-207ENST00000580875 CYP39A1Q9NYL5 469 aa24.59■■□□□ 1.53
SNX11-207ENST00000580875 CCPG1Q9ULG6 757 aa24.59■■□□□ 1.53
SNX11-207ENST00000580875 MTMR7Q9Y216 660 aa24.59■■□□□ 1.53
SNX11-207ENST00000580875 GNEQ9Y223 722 aaKnown RBP24.59■■□□□ 1.53
SNX11-207ENST00000580875 CDH23Q9H251 3354 aa24.58■■□□□ 1.53
SNX11-207ENST00000580875 TLR3O15455 904 aaKnown RBP24.58■■□□□ 1.53
SNX11-207ENST00000580875 ICAM1P05362 532 aa24.58■■□□□ 1.53
SNX11-207ENST00000580875 PDE1AP54750 535 aa24.58■■□□□ 1.53
SNX11-207ENST00000580875 BEX3Q00994 111 aa24.58■■□□□ 1.53
SNX11-207ENST00000580875 CCDC96Q2M329 555 aa24.58■■□□□ 1.53
SNX11-207ENST00000580875 TLK2Q86UE8 772 aa24.58■■□□□ 1.53
SNX11-207ENST00000580875 COL25A1Q9BXS0 654 aaPredicted RBP24.58■■□□□ 1.53
SNX11-207ENST00000580875 EYSQ5T1H1 3165 aa24.58■■□□□ 1.52
SNX11-207ENST00000580875 ASTN1O14525 1302 aa24.58■■□□□ 1.52
SNX11-207ENST00000580875 FOSL2P15408 326 aa24.57■■□□□ 1.52
SNX11-207ENST00000580875 FSCN1Q16658 493 aaKnown RBP24.57■■□□□ 1.52
SNX11-207ENST00000580875 TMEM199Q8N511 208 aa24.57■■□□□ 1.52
SNX11-207ENST00000580875 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.57■■□□□ 1.52
SNX11-207ENST00000580875 AP5M1Q9H0R1 490 aa24.57■■□□□ 1.52
SNX11-207ENST00000580875 TOMM22Q9NS69 142 aa24.57■■□□□ 1.52
SNX11-207ENST00000580875 CABYRO75952 493 aa24.56■■□□□ 1.52
SNX11-207ENST00000580875 SMPD1P17405 629 aa24.56■■□□□ 1.52
SNX11-207ENST00000580875 DNAJB2P25686 324 aa24.56■■□□□ 1.52
SNX11-207ENST00000580875 MCMDC2Q4G0Z9 681 aa24.56■■□□□ 1.52
SNX11-207ENST00000580875 CXCL17Q6UXB2 119 aa24.56■■□□□ 1.52
SNX11-207ENST00000580875 NSMFQ6X4W1 530 aa24.56■■□□□ 1.52
SNX11-207ENST00000580875 TICAM2Q86XR7 235 aa24.56■■□□□ 1.52
SNX11-207ENST00000580875 RANBP17Q9H2T7 1088 aaKnown RBP24.56■■□□□ 1.52
SNX11-207ENST00000580875 CD4P01730 458 aa24.55■■□□□ 1.52
SNX11-207ENST00000580875 FGAP02671 866 aa24.55■■□□□ 1.52
SNX11-207ENST00000580875 CSF2RAP15509 400 aa24.55■■□□□ 1.52
SNX11-207ENST00000580875 HDAC1Q13547 482 aaPredicted RBP24.55■■□□□ 1.52
SNX11-207ENST00000580875 RRP12Q5JTH9 1297 aaKnown RBP24.55■■□□□ 1.52
SNX11-207ENST00000580875 IQSEC1Q6DN90 963 aa24.55■■□□□ 1.52
SNX11-207ENST00000580875 BTNL9Q6UXG8 535 aa24.55■■□□□ 1.52
SNX11-207ENST00000580875 C16orf59Q7L2K0 433 aa24.55■■□□□ 1.52
SNX11-207ENST00000580875 FBXO16Q8IX29 292 aaPredicted RBP24.55■■□□□ 1.52
SNX11-207ENST00000580875 FAM227BQ96M60 508 aa24.55■■□□□ 1.52
SNX11-207ENST00000580875 CRBNQ96SW2 442 aa24.55■■□□□ 1.52
SNX11-207ENST00000580875 PPP1R12CQ9BZL4 782 aa24.55■■□□□ 1.52
SNX11-207ENST00000580875 Q9Y3F1 56 aa24.55■■□□□ 1.52
SNX11-207ENST00000580875 DDX49Q9Y6V7 483 aaKnown RBP24.55■■□□□ 1.52
SNX11-207ENST00000580875 A0A0D9SFI3 127 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 DYNC1LI2O43237 492 aaPredicted RBP24.54■■□□□ 1.52
SNX11-207ENST00000580875 ZEB2O60315 1214 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 TOP1P11387 765 aaKnown RBP24.54■■□□□ 1.52
SNX11-207ENST00000580875 SLC16A2P36021 539 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 TMEM240Q5SV17 173 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 TTBK2Q6IQ55 1244 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 TAPT1Q6NXT6 567 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 EEPD1Q7L9B9 569 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 SLC43A3Q8NBI5 491 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 SEZ6LQ9BYH1 1024 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 VTA1Q9NP79 307 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 PDGFCQ9NRA1 345 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 TCP11L1Q9NUJ3 509 aa24.54■■□□□ 1.52
SNX11-207ENST00000580875 LRRC37A2A6NM11 1700 aa24.53■■□□□ 1.52
SNX11-207ENST00000580875 ITGA7Q13683 1181 aa24.53■■□□□ 1.52
SNX11-207ENST00000580875 SYDE2Q5VT97 1194 aa24.53■■□□□ 1.52
SNX11-207ENST00000580875 PSRC1Q6PGN9 363 aaPredicted RBP24.53■■□□□ 1.52
SNX11-207ENST00000580875 MORC4Q8TE76 937 aa24.53■■□□□ 1.52
SNX11-207ENST00000580875 TMEM47Q9BQJ4 181 aa24.53■■□□□ 1.52
SNX11-207ENST00000580875 ZMYM6O95789 1325 aa24.53■■□□□ 1.52
SNX11-207ENST00000580875 HSPD1P10809 573 aaKnown RBP24.52■■□□□ 1.52
SNX11-207ENST00000580875 GRIN2CQ14957 1233 aa24.52■■□□□ 1.52
SNX11-207ENST00000580875 RASIP1Q5U651 963 aa24.52■■□□□ 1.52
SNX11-207ENST00000580875 TIFAQ96CG3 184 aa24.52■■□□□ 1.52
SNX11-207ENST00000580875 PURBQ96QR8 312 aaKnown RBP24.52■■□□□ 1.52
SNX11-207ENST00000580875 ZNF576Q9H609 170 aa24.52■■□□□ 1.52
SNX11-207ENST00000580875 ADD3Q9UEY8 706 aaKnown RBP24.52■■□□□ 1.52
SNX11-207ENST00000580875 ACRP10323 421 aa24.51■■□□□ 1.51
SNX11-207ENST00000580875 PTGS1P23219 599 aa24.51■■□□□ 1.51
SNX11-207ENST00000580875 CYP2C18P33260 490 aa24.51■■□□□ 1.51
SNX11-207ENST00000580875 BAATQ14032 418 aaPredicted RBP24.51■■□□□ 1.51
SNX11-207ENST00000580875 KIAA1211Q6ZU35 1233 aa24.51■■□□□ 1.51
SNX11-207ENST00000580875 HIPK3Q9H422 1215 aa24.51■■□□□ 1.51
SNX11-207ENST00000580875 FRMPD2Q68DX3 1309 aaPredicted RBP24.51■■□□□ 1.51
SNX11-207ENST00000580875 LOC102724159A0A0B4J2E5 919 aa24.5■■□□□ 1.51
SNX11-207ENST00000580875 NMIQ13287 307 aaPredicted RBP24.5■■□□□ 1.51
SNX11-207ENST00000580875 PWP2Q15269 919 aaKnown RBP24.5■■□□□ 1.51
SNX11-207ENST00000580875 ZNF365Q70YC5 407 aa24.5■■□□□ 1.51
SNX11-207ENST00000580875 ZNF589Q86UQ0 364 aaPredicted RBP24.5■■□□□ 1.51
SNX11-207ENST00000580875 GPCPD1Q9NPB8 672 aa24.5■■□□□ 1.51
SNX11-207ENST00000580875 IL23AQ9NPF7 189 aa24.5■■□□□ 1.51
SNX11-207ENST00000580875 PNMA2Q9UL42 364 aa24.5■■□□□ 1.51
SNX11-207ENST00000580875 GRIN2DO15399 1336 aa24.5■■□□□ 1.51
SNX11-207ENST00000580875 PTPDC1A2A3K4 754 aa24.49■■□□□ 1.51
SNX11-207ENST00000580875 NFIBO00712 420 aa24.49■■□□□ 1.51
SNX11-207ENST00000580875 PDHBP11177 359 aa24.49■■□□□ 1.51
SNX11-207ENST00000580875 PCP11498 1178 aaKnown RBP24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms