RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 STX8Q9UNK0 236 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 GNEQ9Y223 722 aaKnown RBP12.19□□□□□ -0.46
GGA3-210ENST00000580799 Q9Y3F1 56 aa12.19□□□□□ -0.46
GGA3-210ENST00000580799 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.18□□□□□ -0.46
GGA3-210ENST00000580799 TSPY2A6NKD2 308 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 ALAS1P13196 640 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 MCCP23508 829 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 BEX3Q00994 111 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 RAB30Q15771 203 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 TJAP1Q5JTD0 557 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 IQSEC1Q6DN90 963 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 CXCL17Q6UXB2 119 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 HERVK_113Q902F9 699 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 PBX4Q9BYU1 374 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 HIPK3Q9H422 1215 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 CYP39A1Q9NYL5 469 aa12.18□□□□□ -0.46
GGA3-210ENST00000580799 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.18□□□□□ -0.46
GGA3-210ENST00000580799 ASTN1O14525 1302 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 VCANP13611 3396 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 LOC102724159A0A0B4J2E5 919 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 CYP2C18P33260 490 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 PBX2P40425 430 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 ITGA7Q13683 1181 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 PWP2Q15269 919 aaKnown RBP12.17□□□□□ -0.46
GGA3-210ENST00000580799 AKNAD1Q5T1N1 836 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 KCTD1Q719H9 257 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 MORC4Q8TE76 937 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 VTA1Q9NP79 307 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 PRDM6Q9NQX0 595 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 ADD3Q9UEY8 706 aaKnown RBP12.17□□□□□ -0.46
GGA3-210ENST00000580799 MSRAQ9UJ68 235 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 ANAPC4Q9UJX5 808 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 PRR12Q9ULL5 1215 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 PRUNE2Q8WUY3 3088 aa12.17□□□□□ -0.46
GGA3-210ENST00000580799 LCTP09848 1927 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 SPTBN5Q9NRC6 3674 aaKnown RBP12.16□□□□□ -0.46
GGA3-210ENST00000580799 DYNC1LI2O43237 492 aaPredicted RBP12.16□□□□□ -0.46
GGA3-210ENST00000580799 FGBP02675 491 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 ICAM1P05362 532 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 ACRP10323 421 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 SMPD1P17405 629 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 MX1P20591 662 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 NOVP48745 357 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 TAPT1Q6NXT6 567 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 USP38Q8NB14 1042 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 DCAF4Q8WV16 495 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 IL17RBQ9NRM6 502 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 CCPG1Q9ULG6 757 aa12.16□□□□□ -0.46
GGA3-210ENST00000580799 GRIN2DO15399 1336 aa12.15□□□□□ -0.46
GGA3-210ENST00000580799 GRXCR1A8MXD5 290 aa12.15□□□□□ -0.46
GGA3-210ENST00000580799 FOXP2O15409 715 aa12.15□□□□□ -0.46
GGA3-210ENST00000580799 ORC4O43929 436 aa12.15□□□□□ -0.46
GGA3-210ENST00000580799 MUM1L1Q5H9M0 696 aa12.15□□□□□ -0.46
GGA3-210ENST00000580799 NSMFQ6X4W1 530 aa12.15□□□□□ -0.46
GGA3-210ENST00000580799 TICAM2Q86XR7 235 aa12.15□□□□□ -0.46
GGA3-210ENST00000580799 RPUSD2Q8IZ73 545 aaKnown RBP12.15□□□□□ -0.46
GGA3-210ENST00000580799 ATXN2LQ8WWM7 1075 aaKnown RBP12.15□□□□□ -0.46
GGA3-210ENST00000580799 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
GGA3-210ENST00000580799 PRDM12Q9H4Q4 367 aa12.15□□□□□ -0.46
GGA3-210ENST00000580799 SLC28A3Q9HAS3 691 aa12.15□□□□□ -0.46
GGA3-210ENST00000580799 POLR3EQ9NVU0 708 aa12.15□□□□□ -0.46
GGA3-210ENST00000580799 PNMA2Q9UL42 364 aa12.15□□□□□ -0.46
GGA3-210ENST00000580799 GBF1Q92538 1859 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 B4GALT4O60513 344 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 RANBP6O60518 1105 aaKnown RBP12.14□□□□□ -0.47
GGA3-210ENST00000580799 NMT2O60551 498 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 FGRP09769 529 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 SUPT20HL2P0C7V6 817 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 CTDSPL2Q05D32 466 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 ALX1Q15699 326 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 CCDC96Q2M329 555 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 DUSP28Q4G0W2 176 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 BTNL9Q6UXG8 535 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 KIAA1211Q6ZU35 1233 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 EEPD1Q7L9B9 569 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 FBXO16Q8IX29 292 aaPredicted RBP12.14□□□□□ -0.47
GGA3-210ENST00000580799 OTUD7AQ8TE49 926 aaPredicted RBP12.14□□□□□ -0.47
GGA3-210ENST00000580799 CHMP4CQ96CF2 233 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 TRPV6Q9H1D0 765 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 RANBP17Q9H2T7 1088 aaKnown RBP12.14□□□□□ -0.47
GGA3-210ENST00000580799 PDGFCQ9NRA1 345 aa12.14□□□□□ -0.47
GGA3-210ENST00000580799 CXXC1Q9P0U4 656 aaPredicted RBP12.14□□□□□ -0.47
GGA3-210ENST00000580799 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
GGA3-210ENST00000580799 UMODL1Q5DID0 1318 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 SALL3Q9BXA9 1300 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 TNFRSF10AO00220 468 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 PFKMP08237 780 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
GGA3-210ENST00000580799 CPT1AP50416 773 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 SNAP25P60880 206 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 OTOP2Q7RTS6 562 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 EVI5LQ96CN4 794 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 MPHOSPH6Q99547 160 aaKnown RBP12.13□□□□□ -0.47
GGA3-210ENST00000580799 WNT8AQ9H1J5 351 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 ALDH8A1Q9H2A2 487 aaPredicted RBP12.13□□□□□ -0.47
GGA3-210ENST00000580799 HELLSQ9NRZ9 838 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 THEGQ9P2T0 379 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 PCDHB15Q9Y5E8 787 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 SLC4A7Q9Y6M7 1214 aa12.13□□□□□ -0.47
GGA3-210ENST00000580799 CHD9Q3L8U1 2897 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms