RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 CXCL17Q6UXB2 119 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 MIGA1Q8NAN2 632 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 GDPD5Q8WTR4 605 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 DCHS1Q96JQ0 3298 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 TET1Q8NFU7 2136 aa9.38□□□□□ -0.91
SMARCE1-217ENST00000580654 KMT2EQ8IZD2 1858 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 LCHNA4D1U4 455 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 GRXCR2A6NFK2 248 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 CYP7A1P22680 504 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 STAT3P40763 770 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 PTCRAQ6ISU1 281 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 TTC6Q86TZ1 520 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 HERC6Q8IVU3 1022 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 SLC9A7Q96T83 725 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 VCPKMTQ9H867 229 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 LMCD1Q9NZU5 365 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 TMX2Q9Y320 296 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 RIPK3Q9Y572 518 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 CACNA1BQ00975 2339 aa9.37□□□□□ -0.91
SMARCE1-217ENST00000580654 VWA5AO00534 786 aa9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 MPHOSPH10O00566 681 aaKnown RBP9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 WDR46O15213 610 aaKnown RBP9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 KCNA5P22460 613 aa9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 ZAP70P43403 619 aa9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 PSMC6P62333 389 aa9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 PLCB2Q00722 1185 aa9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 DEFB128Q7Z7B8 93 aa9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 PHOSPHO2Q8TCD6 241 aa9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 MEIS3Q99687 375 aa9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 ABHD16BQ9H3Z7 469 aa9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 SPC25Q9HBM1 224 aa9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 PLXNA3P51805 1871 aa9.36□□□□□ -0.91
SMARCE1-217ENST00000580654 ZFHX2Q9C0A1 2572 aaPredicted RBP9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 SRGAP3O43295 1099 aa9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 TECTAO75443 2155 aa9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 PFKMP08237 780 aa9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 CYP2C9P11712 490 aa9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 MTX1Q13505 466 aa9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 TMCO2Q7Z6W1 182 aaPredicted RBP9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 NEK9Q8TD19 979 aa9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 DBNDD2Q9BQY9 259 aa9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 SUGCTQ9HAC7 445 aa9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 ALG13Q9NP73 1137 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 PPP1R9AQ9ULJ8 1098 aa9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 GNEQ9Y223 722 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-217ENST00000580654 ZNF536O15090 1300 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 RBAK-RBAKDNI3L0D1 243 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 IGSF3O75054 1194 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 CABYRO75952 493 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 AKR1B1P15121 316 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 COPB2P35606 906 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 PTPN5P54829 565 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 ZP2Q05996 745 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 TCF15Q12870 199 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 TTC39AQ5SRH9 613 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 TMEM63BQ5T3F8 832 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 TMEM179Q6ZVK1 233 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 ARMCX2Q7L311 632 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 ERMP1Q7Z2K6 904 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 MAGEB6Q8N7X4 407 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 TMC2Q8TDI7 906 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 RIOK1Q9BRS2 568 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 ALDH8A1Q9H2A2 487 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 TRMT13Q9NUP7 481 aaKnown RBP9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 ATG2AQ2TAZ0 1938 aa9.34□□□□□ -0.91
SMARCE1-217ENST00000580654 POLR3DP05423 398 aaPredicted RBP9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 CYP2D6P10635 497 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 ACTN1P12814 892 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 IRS1P35568 1242 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 ICA1Q05084 483 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 FSCN1Q16658 493 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 SNRNP48Q6IEG0 339 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 TLK2Q86UE8 772 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 CCDC144CPQ8IYA2 1237 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 DDX11Q96FC9 970 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 MFSD14AQ96MC6 490 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 SEZ6LQ9BYH1 1024 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 ARHGEF10LQ9HCE6 1279 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 EPG5Q9HCE0 2579 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 TRIP12Q14669 1992 aaPredicted RBP9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 LCTP09848 1927 aa9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 GREB1LQ9C091 1923 aaPredicted RBP9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 BAZ2AQ9UIF9 1905 aaKnown RBP9.33□□□□□ -0.92
SMARCE1-217ENST00000580654 KMT2BQ9UMN6 2715 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 KIF28PB7ZC32 967 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 H3BQ06 376 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 GFRA3O60609 400 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 SMPD1P17405 629 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 ERVK-21P61565 698 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 TNFAIP2Q03169 654 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 PPP4R3BQ5MIZ7 849 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 FAM83BQ5T0W9 1011 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 DYNLL2Q96FJ2 89 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 ZNF512BQ96KM6 892 aaPredicted RBP9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 TEX13BQ9BXU2 312 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 MFRPQ9BY79 579 aa9.32□□□□□ -0.92
SMARCE1-217ENST00000580654 ANTXR1Q9H6X2 564 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms