RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 PAPPA2Q9BXP8 1791 aa16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 ACTN4O43707 911 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 EDIL3O43854 480 aa16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 DGKZQ13574 1117 aa16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 UVSSAQ2YD98 709 aa16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 LUZP1Q86V48 1076 aa16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 FBXO28Q9NVF7 368 aa16.86■□□□□ 0.29
CDK5RAP3-218ENST00000580391 WDR90Q96KV7 1748 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USP17L15C9J2P7 530 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USP17L13C9JLJ4 530 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USP17L11C9JVI0 530 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USP17L18D6R9N7 530 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USP17L22D6RA61 530 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USP17L17D6RBQ6 530 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USP17L19D6RCP7 530 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USP17L20D6RJB6 530 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 NEMFO60524 1076 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 MRPL12P52815 198 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 CCDC173Q0VFZ6 552 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USP17L24Q0WX57 530 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USP17L6PQ6QN14 398 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 DHX58Q96C10 678 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 USP25Q9UHP3 1055 aa16.85■□□□□ 0.29
CDK5RAP3-218ENST00000580391 BIN1O00499 593 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 TDP2O95551 362 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 OR52Z1P0C646 297 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 PRR29P0C7W0 189 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 LMOD1P29536 600 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 ZNF165P49910 485 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 POTEDQ86YR6 584 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 GRAMD1CQ8IYS0 662 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 KIFC2Q96AC6 838 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 WRNIP1Q96S55 665 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 ANO10Q9NW15 660 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 RBBP6Q7Z6E9 1792 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 DPCR1Q3MIW9 517 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 SAMD1Q6SPF0 538 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 PPP1R9BQ96SB3 815 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 GINM1Q9NU53 330 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 TUBE1Q9UJT0 475 aa16.84■□□□□ 0.29
CDK5RAP3-218ENST00000580391 COL11A1P12107 1806 aaPredicted RBP16.83■□□□□ 0.29
CDK5RAP3-218ENST00000580391 LAD1O00515 517 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 MEIS2O14770 477 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 OPLAHO14841 1288 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 SLC37A4O43826 429 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 CDC25AP30304 524 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 LONP1P36776 959 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 CCDC174Q6PII3 467 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 DTHD1Q6ZMT9 781 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 SCYL3Q8IZE3 742 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 CHURC1Q8WUH1 139 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ZKSCAN4Q969J2 545 aaPredicted RBP16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 P2RX7Q99572 595 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 RANBP17Q9H2T7 1088 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ADARB2Q9NS39 739 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ZNF112Q9UJU3 913 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PPP2R3BQ9Y5P8 575 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PTPRFP10586 1907 aa16.83■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PP2D1A8MPX8 630 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PRPHP41219 470 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 MDM2Q00987 491 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ORC2Q13416 577 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 POSTNQ15063 836 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 FAM160B2Q86V87 743 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 HOOK2Q96ED9 719 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PDLIM2Q96JY6 352 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ANO3Q9BYT9 981 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 KIAA1683Q9H0B3 1180 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 GLT8D2Q9H1C3 349 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 FEM1BQ9UK73 627 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PITPNM2Q9BZ72 1349 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 RLFQ13129 1914 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PLA2G6O60733 806 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 MTMR2Q13614 643 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ISM2Q6H9L7 571 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 DLK2Q6UY11 383 aa16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ELOA2Q8IYF1 753 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-218ENST00000580391 WDR46O15213 610 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-218ENST00000580391 AP5Z1O43299 807 aa16.81■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PRKCSHP14314 528 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-218ENST00000580391 NLRP12P59046 1061 aa16.81■□□□□ 0.28
CDK5RAP3-218ENST00000580391 IQCB1Q15051 598 aa16.81■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ZRSR1Q15695 479 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-218ENST00000580391 E2F4Q16254 413 aa16.81■□□□□ 0.28
CDK5RAP3-218ENST00000580391 CEP57L1Q8IYX8 460 aa16.81■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PCDHA5Q9Y5H7 936 aa16.81■□□□□ 0.28
CDK5RAP3-218ENST00000580391 CAVIN2O95810 425 aa16.8■□□□□ 0.28
CDK5RAP3-218ENST00000580391 LPAR1Q92633 364 aa16.8■□□□□ 0.28
CDK5RAP3-218ENST00000580391 ADM5C9JUS6 153 aa16.8■□□□□ 0.28
CDK5RAP3-218ENST00000580391 SLFN14P0C7P3 912 aa16.8■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PTPRAP18433 802 aa16.8■□□□□ 0.28
CDK5RAP3-218ENST00000580391 AP3B2Q13367 1082 aa16.8■□□□□ 0.28
CDK5RAP3-218ENST00000580391 PRKG1Q13976 671 aa16.8■□□□□ 0.28
CDK5RAP3-218ENST00000580391 KARSQ15046 597 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-218ENST00000580391 CALCRLQ16602 461 aa16.8■□□□□ 0.28
CDK5RAP3-218ENST00000580391 KLRG1Q96E93 195 aa16.8■□□□□ 0.28
CDK5RAP3-218ENST00000580391 HOOK1Q9UJC3 728 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-218ENST00000580391 VCAM1P19320 739 aa16.79■□□□□ 0.28
CDK5RAP3-218ENST00000580391 CASP1P29466 404 aa16.79■□□□□ 0.28
CDK5RAP3-218ENST00000580391 TXLNAP40222 546 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms