RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 BRMS1Q9HCU9 246 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 GOPCQ9HD26 462 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CLEC11AQ9Y240 323 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 MYH6P13533 1939 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CTAGE5O15320 804 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PTPRAP18433 802 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 SYDE2Q5VT97 1194 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 MAP1SQ66K74 1059 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 SCYL3Q8IZE3 742 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ZMYND12Q9H0C1 365 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ZNF112Q9UJU3 913 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 M0R2N6 131 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 SLC39A14Q15043 492 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ZRSR1Q15695 479 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 INF2Q27J81 1249 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 SUPT20HL1Q3ZLR7 823 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 DRC7Q8IY82 874 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ENGASEQ8NFI3 743 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 MTMR8Q96EF0 704 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 SH3GLB2Q9NR46 395 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PCDHA1Q9Y5I3 950 aa14.45□□□□□ -0.1
CDK5RAP3-217ENST00000580287 TRAF5O00463 557 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 STAT2P52630 851 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CCDC174Q6PII3 467 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP50Q70EL3 339 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 TRIM5Q9C035 493 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PICK1Q9NRD5 415 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 EMILIN3Q9NT22 766 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP17L15C9J2P7 530 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP17L13C9JLJ4 530 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP17L11C9JVI0 530 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP17L18D6R9N7 530 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP17L22D6RA61 530 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP17L17D6RBQ6 530 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP17L19D6RCP7 530 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP17L20D6RJB6 530 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CALML3P27482 149 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 MCM7P33993 719 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP17L24Q0WX57 530 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 RILPL1Q5EBL4 403 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP17L6PQ6QN14 398 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CCDC186Q7Z3E2 898 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 SMAP1Q8IYB5 467 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CLMNQ96JQ2 1002 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 RRAGCQ9HB90 399 aa14.44□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PITPNM2Q9BZ72 1349 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 GOLGA6L19H0YKK7 550 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 HMGCS2P54868 508 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 VGLL4Q14135 290 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ARID5BQ14865 1188 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 STX1AQ16623 288 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 AXDND1Q5T1B0 1012 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 FMR1NBQ8N0W7 255 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 RGS22Q8NE09 1264 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CCDC148Q8NFR7 591 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CDCA5Q96FF9 252 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ZNF408Q9H9D4 720 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 A0A1W2PQ27 194 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 A0A1W2PQ64 194 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 A0A1W2PQD8 194 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 BECN2A8MW95 431 aa14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 TTLL12Q14166 644 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PCNTO95613 3336 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CCDC194A0A1B0GVG4 234 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 C6orf50Q9HD87 102 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PPP2R3BQ9Y5P8 575 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 VCAM1P19320 739 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 TTC38Q5R3I4 469 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ZNF280CQ8ND82 737 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 TBC1D5Q92609 795 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 WNK4Q96J92 1243 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 UIMC1Q96RL1 719 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 TANGO6Q9C0B7 1094 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 KIAA1683Q9H0B3 1180 aa14.42□□□□□ -0.1
CDK5RAP3-217ENST00000580287 BIN1O00499 593 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ZNF202O95125 648 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PFKFB1P16118 471 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 BTNL9Q6UXG8 535 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 USP49Q70CQ1 688 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 JMYQ8N9B5 988 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 P2RX7Q99572 595 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 SH2D4AQ9H788 454 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PSTPIP2Q9H939 334 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PPP1R12BO60237 982 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 GNA11P29992 359 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ADCY7P51828 1080 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 BACE1P56817 501 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 CCDC144BQ3MJ40 725 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 SHC4Q6S5L8 630 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 FBXO11Q86XK2 927 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 REXO1Q8N1G1 1221 aaKnown RBP14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 MYRIPQ8NFW9 859 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 ELP3Q9H9T3 547 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 SNCAIPQ9Y6H5 919 aa14.41□□□□□ -0.1
CDK5RAP3-217ENST00000580287 IQCA1LA6NCM1 817 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 GOLGA6L6A8MZA4 724 aa14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 HOXA13P31271 388 aaPredicted RBP14.4□□□□□ -0.1
CDK5RAP3-217ENST00000580287 PTGDRQ13258 359 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms