RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 SRGAP2BP0DMP2 458 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 MKRN3Q13064 507 aaKnown RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 PUM3Q15397 648 aaKnown RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 USH1GQ495M9 461 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 CFAP221Q4G0U5 840 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 CCDC138Q96M89 665 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 RPS6KC1Q96S38 1066 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 A0A087WUV0 522 aaPredicted RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 POTEMA6NI47 508 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 F8W8V4 182 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 GNL1P36915 607 aaPredicted RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 SLC1A4P43007 532 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 LIG4P49917 911 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 SESN3P58005 492 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 PPARDQ03181 441 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 FAM102BQ5T8I3 360 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 POTEHQ6S545 545 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 POTEGQ6S5H5 508 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 CABP7Q86V35 215 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 U2AF1L4Q8WU68 220 aaKnown RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 NEUROG2Q9H2A3 272 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 FNDC3AQ9Y2H6 1198 aaKnown RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 FANCD2Q9BXW9 1451 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 LSM1O15116 133 aaKnown RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 GNPATO15228 680 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 SERPINB6P35237 376 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 PDE1AP54750 535 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 KIF23Q02241 960 aaPredicted RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 DMTNQ08495 405 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 TTC38Q5R3I4 469 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 ELMSAN1Q6PJG2 1045 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 DPP8Q6V1X1 898 aaPredicted RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 BBOF1Q8ND07 529 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.58□□□□□ -1.523e-9■■■■■ 78.5
NF1-219ENST00000579081 CEP19Q96LK0 163 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 CENPKQ9BS16 269 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 EDEM3Q9BZQ6 932 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 SLC8A2Q9UPR5 921 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 MAPK8IP1Q9UQF2 711 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 ANKARQ7Z5J8 1434 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 GOLGA8MH3BSY2 632 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 ADCY8P40145 1251 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 RASSF7Q02833 373 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 SFSWAPQ12872 951 aaKnown RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 AKAP4Q5JQC9 854 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 RINT1Q6NUQ1 792 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 METTL23Q86XA0 190 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 NIM1KQ8IY84 436 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 FAM186BQ8IYM0 893 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.58□□□□□ -1.527e-6■□□□□ 9.9
NF1-219ENST00000579081 SCHIP1Q9P0W5 487 aaPredicted RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 TLR3O15455 904 aaKnown RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 HNRNPRO43390 633 aaKnown RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 NPR1P16066 1061 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 GPR162Q16538 588 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 CREB3L3Q68CJ9 461 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 RDH13Q8NBN7 331 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 TRIM55Q9BYV6 548 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 CCDC87Q9NVE4 849 aa5.58□□□□□ -1.52
NF1-219ENST00000579081 PA2G4Q9UQ80 394 aaKnown RBP5.58□□□□□ -1.52
NF1-219ENST00000579081 SYNRGQ9UMZ2 1314 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 SYNJ2BP-COX16A0A087WUM0 186 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 XPOTO43592 962 aaKnown RBP5.57□□□□□ -1.52
NF1-219ENST00000579081 IFNA8P32881 189 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 EIF3BP55884 814 aaKnown RBP5.57□□□□□ -1.52
NF1-219ENST00000579081 TFCP2Q12800 502 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 SLC12A1Q13621 1099 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 DLGAP5Q15398 846 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 TMEM87BQ96K49 555 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 LLPHQ9BRT6 129 aaKnown RBP5.57□□□□□ -1.52
NF1-219ENST00000579081 HELLSQ9NRZ9 838 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 PSD3Q9NYI0 1048 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 COX16Q9P0S2 106 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 V9GY48 417 aaPredicted RBP5.57□□□□□ -1.52
NF1-219ENST00000579081 SLC26A4O43511 780 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 HIP1RO75146 1068 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 IL2RBP14784 551 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 STAMBPL1Q96FJ0 436 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 CYTH2Q99418 400 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 TAB2Q9NYJ8 693 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 MYOM2P54296 1465 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 IFT140Q96RY7 1462 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 A6NJR5 290 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 RAP1GDS1P52306 607 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 ARHGDIAP52565 204 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 OTUD7BQ6GQQ9 843 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 RAPH1Q70E73 1250 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 TMTC1Q8IUR5 882 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 SLC17A8Q8NDX2 589 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 MAD1L1Q9Y6D9 718 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 TTC41PQ6P2S7 1318 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 CCDC151A5D8V7 595 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 H7C0C1 242 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 SCP2P22307 547 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 ATP5OP48047 213 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 TEX9Q8N6V9 391 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 GDAP1Q8TB36 358 aa5.57□□□□□ -1.52
NF1-219ENST00000579081 NR1H4Q96RI1 486 aaPredicted RBP5.57□□□□□ -1.52
NF1-219ENST00000579081 MTRQ99707 1265 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms