RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 MAMDC4Q6UXC1 1216 aa10□□□□□ -0.81
PPP4R1-210ENST00000578557 DHX32Q7L7V1 743 aaKnown RBP10□□□□□ -0.81
PPP4R1-210ENST00000578557 LRRC47Q8N1G4 583 aaKnown RBP10□□□□□ -0.81
PPP4R1-210ENST00000578557 ANKRD35Q8N283 1001 aa10□□□□□ -0.81
PPP4R1-210ENST00000578557 KCNB2Q92953 911 aa10□□□□□ -0.81
PPP4R1-210ENST00000578557 MARVELD3Q96A59 401 aa10□□□□□ -0.81
PPP4R1-210ENST00000578557 NEK1Q96PY6 1258 aa10□□□□□ -0.81
PPP4R1-210ENST00000578557 SEZ6LQ9BYH1 1024 aa10□□□□□ -0.81
PPP4R1-210ENST00000578557 NBPF3Q9H094 633 aa10□□□□□ -0.81
PPP4R1-210ENST00000578557 PAK6Q9NQU5 681 aaPredicted RBP10□□□□□ -0.81
PPP4R1-210ENST00000578557 ADD3Q9UEY8 706 aaKnown RBP10□□□□□ -0.81
PPP4R1-210ENST00000578557 PRR12Q9ULL5 1215 aa10□□□□□ -0.81
PPP4R1-210ENST00000578557 ISY1Q9ULR0 285 aaKnown RBP10□□□□□ -0.81
PPP4R1-210ENST00000578557 SYNGAP1Q96PV0 1343 aa10□□□□□ -0.81
PPP4R1-210ENST00000578557 FOCADQ5VW36 1801 aa10□□□□□ -0.81
PPP4R1-210ENST00000578557 AK9Q5TCS8 1911 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 CCDC69A6NI79 296 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 DPYSL4O14531 572 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 SLC27A2O14975 620 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 TFRCP02786 760 aaKnown RBP9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 INHAP05111 366 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 CCL5P13501 91 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 TMEM67Q5HYA8 995 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 POTEEQ6S8J3 1075 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 SGMS1Q86VZ5 419 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 CLEC10AQ8IUN9 316 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 ARRDC4Q8NCT1 418 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 DNERQ8NFT8 737 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 CTCFLQ8NI51 663 aaPredicted RBP9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 KCNV2Q8TDN2 545 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 IGDCC4Q8TDY8 1250 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 TRERF1Q96PN7 1200 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 HTATIP2Q9BUP3 242 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 INCENPQ9NQS7 918 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 FBXO28Q9NVF7 368 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 CNPY2Q9Y2B0 182 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 MRPL11Q9Y3B7 192 aaKnown RBP9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 NEDD4P46934 1319 aa9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 DDX60LQ5H9U9 1706 aaKnown RBP9.99□□□□□ -0.81
PPP4R1-210ENST00000578557 DNAJC25-GNG10A0A024R161 153 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 PALM3A6NDB9 673 aaPredicted RBP9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 NMT2O60551 498 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 IGHA2P01877 340 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 HSPA4P34932 840 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 ANAPC15P60006 121 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 ZNF792Q3KQV3 632 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 KCTD1Q719H9 257 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 MB21D2Q8IYB1 491 aaPredicted RBP9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 CPXCR1Q8N123 301 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 SH3TC2Q8TF17 1288 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 MAML3Q96JK9 1138 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 TINF2Q9BSI4 451 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 AMNQ9BXJ7 453 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 TM6SF1Q9BZW5 370 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 GLT8D2Q9H1C3 349 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 ABHD16BQ9H3Z7 469 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 RBM28Q9NW13 759 aaKnown RBP9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 RBM27Q9P2N5 1060 aaKnown RBP9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 CCPG1Q9ULG6 757 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 Q9Y3F1 56 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 TACC3Q9Y6A5 838 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 ABCB11O95342 1321 aa9.98□□□□□ -0.81
PPP4R1-210ENST00000578557 OTOFQ9HC10 1997 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 KLRF2D3W0D1 207 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 hCG_1984214I3L0E3 225 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 SEPT4O43236 478 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 PRC1O43663 620 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 EVI5O60447 810 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 CACNB2Q08289 660 aaPredicted RBP9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 TROAPQ12815 778 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 MCTP2Q6DN12 878 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 NFXL1Q6ZNB6 911 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 FAM177A1Q8N128 213 aaPredicted RBP9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 ZNF713Q8N859 430 aaPredicted RBP9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 U2AF1L4Q8WU68 220 aaKnown RBP9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 TRIB2Q92519 343 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 NUP88Q99567 741 aaPredicted RBP9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 IL25Q9H293 177 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 RIOX1Q9H6W3 641 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 SPC25Q9HBM1 224 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 RAVER2Q9HCJ3 691 aaKnown RBP9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 OGDHLQ9ULD0 1010 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 FAM184BQ9ULE4 1060 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 SLC12A7Q9Y666 1083 aa9.97□□□□□ -0.81
PPP4R1-210ENST00000578557 MYH1P12882 1939 aa9.96□□□□□ -0.81
PPP4R1-210ENST00000578557 PNMA6FA0A0J9YX94 578 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 ZBTB5O15062 677 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 ALAS1P13196 640 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 ELNP15502 786 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 FGD1P98174 961 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 CAP1Q01518 475 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 EXOSC10Q01780 885 aaKnown RBP9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 GRM4Q14833 912 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 NECAB2Q7Z6G3 386 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 FBXO11Q86XK2 927 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 ADGRF4Q8IZF3 695 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 MTMR8Q96EF0 704 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 IWS1Q96ST2 819 aa9.96□□□□□ -0.82
PPP4R1-210ENST00000578557 ZKSCAN3Q9BRR0 538 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms