RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 TTC21AQ8NDW8 1320 aa6.25□□□□□ -1.41
IFT20-205ENST00000578009 GRK4P32298 578 aa6.25□□□□□ -1.41
IFT20-205ENST00000578009 CDK8P49336 464 aa6.25□□□□□ -1.41
IFT20-205ENST00000578009 CCDC136Q96JN2 1154 aa6.25□□□□□ -1.41
IFT20-205ENST00000578009 MYH16Q9H6N6 1097 aa6.25□□□□□ -1.41
IFT20-205ENST00000578009 DCTN4Q9UJW0 460 aa6.25□□□□□ -1.41
IFT20-205ENST00000578009 SNCAIPQ9Y6H5 919 aa6.25□□□□□ -1.41
IFT20-205ENST00000578009 CEP170BQ9Y4F5 1589 aaPredicted RBP6.25□□□□□ -1.41
IFT20-205ENST00000578009 ADAMTSL3P82987 1691 aa6.25□□□□□ -1.41
IFT20-205ENST00000578009 SETD1BQ9UPS6 1966 aaKnown RBP6.25□□□□□ -1.41
IFT20-205ENST00000578009 SSH2Q76I76 1423 aa6.25□□□□□ -1.41
IFT20-205ENST00000578009 ACEP12821 1306 aa6.25□□□□□ -1.41
IFT20-205ENST00000578009 TTC21BQ7Z4L5 1316 aa6.25□□□□□ -1.41
IFT20-205ENST00000578009 USP31Q70CQ4 1352 aa6.24□□□□□ -1.41
IFT20-205ENST00000578009 SOWAHDA6NJG2 315 aa6.24□□□□□ -1.41
IFT20-205ENST00000578009 TREHO43280 583 aa6.24□□□□□ -1.41
IFT20-205ENST00000578009 SRFP11831 508 aa6.24□□□□□ -1.41
IFT20-205ENST00000578009 TMPOP42166 694 aaKnown RBP6.24□□□□□ -1.41
IFT20-205ENST00000578009 ZNF605Q86T29 641 aa6.24□□□□□ -1.41
IFT20-205ENST00000578009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.24□□□□□ -1.41
IFT20-205ENST00000578009 DPH2Q9BQC3 489 aaPredicted RBP6.24□□□□□ -1.41
IFT20-205ENST00000578009 USP6P35125 1406 aa6.24□□□□□ -1.41
IFT20-205ENST00000578009 CDK12Q9NYV4 1490 aaPredicted RBP6.23□□□□□ -1.41
IFT20-205ENST00000578009 XRN1Q8IZH2 1706 aaKnown RBP6.23□□□□□ -1.41
IFT20-205ENST00000578009 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.23□□□□□ -1.41
IFT20-205ENST00000578009 MAPK1P28482 360 aa6.23□□□□□ -1.41
IFT20-205ENST00000578009 TPP2P29144 1249 aaPredicted RBP6.23□□□□□ -1.41
IFT20-205ENST00000578009 IL13P35225 146 aa6.23□□□□□ -1.41
IFT20-205ENST00000578009 MAPK8P45983 427 aa6.23□□□□□ -1.41
IFT20-205ENST00000578009 NME9Q86XW9 330 aa6.23□□□□□ -1.41
IFT20-205ENST00000578009 EXOC6Q8TAG9 804 aa6.23□□□□□ -1.41
IFT20-205ENST00000578009 PIWIL2Q8TC59 973 aaKnown RBP6.23□□□□□ -1.41
IFT20-205ENST00000578009 GAL3ST3Q96A11 431 aa6.23□□□□□ -1.41
IFT20-205ENST00000578009 MCOLN1Q9GZU1 580 aa6.23□□□□□ -1.41
IFT20-205ENST00000578009 ZNF142P52746 1687 aaPredicted RBP6.23□□□□□ -1.41
IFT20-205ENST00000578009 MAPK8IP3Q9UPT6 1336 aa6.23□□□□□ -1.41
IFT20-205ENST00000578009 MON2Q7Z3U7 1717 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 KIF24Q5T7B8 1368 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 U2SURPO15042 1029 aaKnown RBP6.22□□□□□ -1.41
IFT20-205ENST00000578009 KCNA6P17658 529 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 DLG4P78352 724 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 CALD1Q05682 793 aaKnown RBP6.22□□□□□ -1.41
IFT20-205ENST00000578009 BAHD1Q8TBE0 780 aaPredicted RBP6.22□□□□□ -1.41
IFT20-205ENST00000578009 FBF1Q8TES7 1133 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 ZNF428Q96B54 188 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 SETDB2Q96T68 719 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 SLC6A17Q9H1V8 727 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 DUSP13Q9UII6 198 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 TOPAZ1Q8N9V7 1692 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 OVOS2A0A0J9YW53 1432 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 OVOS2Q6IE36 1432 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 KIF20BQ96Q89 1820 aa6.22□□□□□ -1.41
IFT20-205ENST00000578009 FOXD2O60548 495 aaPredicted RBP6.21□□□□□ -1.42
IFT20-205ENST00000578009 RARSP54136 660 aaKnown RBP6.21□□□□□ -1.42
IFT20-205ENST00000578009 EGR3Q06889 387 aa6.21□□□□□ -1.42
IFT20-205ENST00000578009 IRF2BP1Q8IU81 584 aa6.21□□□□□ -1.42
IFT20-205ENST00000578009 OXR1Q8N573 874 aa6.21□□□□□ -1.42
IFT20-205ENST00000578009 PDZD8Q8NEN9 1154 aa6.21□□□□□ -1.42
IFT20-205ENST00000578009 ANKRD24Q8TF21 1146 aa6.21□□□□□ -1.42
IFT20-205ENST00000578009 DUSP15Q9H1R2 295 aaPredicted RBP6.21□□□□□ -1.42
IFT20-205ENST00000578009 TRIT1Q9H3H1 467 aaKnown RBP6.21□□□□□ -1.42
IFT20-205ENST00000578009 CNOT6Q9ULM6 557 aaKnown RBP6.21□□□□□ -1.42
IFT20-205ENST00000578009 JAG2Q9Y219 1238 aa6.21□□□□□ -1.42
IFT20-205ENST00000578009 AKAP12Q02952 1782 aa6.21□□□□□ -1.42
IFT20-205ENST00000578009 RIMS1Q86UR5 1692 aaKnown RBP6.2□□□□□ -1.42
IFT20-205ENST00000578009 NPHP4O75161 1426 aaPredicted RBP6.2□□□□□ -1.42
IFT20-205ENST00000578009 A0A0G2JLL6 359 aaPredicted RBP6.2□□□□□ -1.42
IFT20-205ENST00000578009 MYOCOSA0A1B0GUC4 107 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 GIPC1O14908 333 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 LMNB1P20700 586 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 ETV3P41162 512 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 RIPK4P57078 832 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 LMOD3Q0VAK6 560 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 NFE2L2Q16236 605 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 TIGD5Q53EQ6 642 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 TTBK2Q6IQ55 1244 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 LILRA2Q8N149 483 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 NGDNQ8NEJ9 315 aaKnown RBP6.2□□□□□ -1.42
IFT20-205ENST00000578009 Q96M66 194 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 SP110Q9HB58 689 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 GPATCH2Q9NW75 528 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 LRRC7Q96NW7 1537 aa6.2□□□□□ -1.42
IFT20-205ENST00000578009 NCOA3Q9Y6Q9 1424 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 TCERG1O14776 1098 aaKnown RBP6.19□□□□□ -1.42
IFT20-205ENST00000578009 PLIN1O60240 522 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 SEMA7AO75326 666 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 PGRP06401 933 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 ZGLP1P0C6A0 271 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 USP17L7P0C7H9 530 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 PRKAR2BP31323 418 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 PDE6BP35913 854 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 GAB4Q2WGN9 574 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 TCERG1LQ5VWI1 586 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 SV2BQ7L1I2 683 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 CENPQQ7L2Z9 268 aaPredicted RBP6.19□□□□□ -1.42
IFT20-205ENST00000578009 SYTL4Q96C24 671 aaPredicted RBP6.19□□□□□ -1.42
IFT20-205ENST00000578009 INTS4Q96HW7 963 aaKnown RBP6.19□□□□□ -1.42
IFT20-205ENST00000578009 CRBNQ96SW2 442 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 SGPP1Q9BX95 441 aa6.19□□□□□ -1.42
IFT20-205ENST00000578009 TJP2Q9UDY2 1190 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms