RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.87■□□□□ 0.61
VAPA-204ENST00000577901 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.87■□□□□ 0.61
VAPA-204ENST00000577901 TSPY2A6NKD2 308 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 ZNF213O14771 459 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 FDX1P10109 184 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 CHMLP26374 656 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 GNASQ5JWF2 1037 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 PPP4R3BQ5MIZ7 849 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 ERICH6BQ5W0A0 696 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 CCDC144CPQ8IYA2 1237 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 RAD50Q92878 1312 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 VTI1AQ96AJ9 217 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 PLIN4Q96Q06 1357 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 CTNNA3Q9UI47 895 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 ISY1Q9ULR0 285 aaKnown RBP18.87■□□□□ 0.61
VAPA-204ENST00000577901 MYH4Q9Y623 1939 aa18.87■□□□□ 0.61
VAPA-204ENST00000577901 TMEM232C9JQI7 657 aa18.86■□□□□ 0.61
VAPA-204ENST00000577901 PCP11498 1178 aaKnown RBP18.86■□□□□ 0.61
VAPA-204ENST00000577901 STAT2P52630 851 aa18.86■□□□□ 0.61
VAPA-204ENST00000577901 MFSD5Q6N075 450 aa18.86■□□□□ 0.61
VAPA-204ENST00000577901 KATNBL1Q9H079 304 aa18.86■□□□□ 0.61
VAPA-204ENST00000577901 ACAD9Q9H845 621 aa18.86■□□□□ 0.61
VAPA-204ENST00000577901 TOMM22Q9NS69 142 aa18.86■□□□□ 0.61
VAPA-204ENST00000577901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.86■□□□□ 0.61
VAPA-204ENST00000577901 A0A0U1RQG5 324 aaPredicted RBP18.85■□□□□ 0.61
VAPA-204ENST00000577901 ARVCFO00192 962 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 ORC4O43929 436 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 RANBP6O60518 1105 aaKnown RBP18.85■□□□□ 0.61
VAPA-204ENST00000577901 FGRP09769 529 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 DNAJB2P25686 324 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 HAND2P61296 217 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 CNTN2Q02246 1040 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 GRIN2CQ14957 1233 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 MFSD6Q6ZSS7 791 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 FAM160B2Q86V87 743 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 CHURC1Q8WUH1 139 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 GMCL1Q96IK5 515 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.85■□□□□ 0.612e-6■■■□□ 16.4
VAPA-204ENST00000577901 RNF41Q9H4P4 317 aaPredicted RBP18.85■□□□□ 0.61
VAPA-204ENST00000577901 INCENPQ9NQS7 918 aa18.85■□□□□ 0.61
VAPA-204ENST00000577901 CTAGE5O15320 804 aa18.84■□□□□ 0.61
VAPA-204ENST00000577901 IKQ13123 557 aaPredicted RBP18.84■□□□□ 0.61
VAPA-204ENST00000577901 PPIGQ13427 754 aaKnown RBP eCLIP18.84■□□□□ 0.61
VAPA-204ENST00000577901 AKNAD1Q5T1N1 836 aa18.84■□□□□ 0.61
VAPA-204ENST00000577901 CCDC174Q6PII3 467 aa18.84■□□□□ 0.61
VAPA-204ENST00000577901 FAM133AQ8N9E0 248 aa18.84■□□□□ 0.61
VAPA-204ENST00000577901 STAG1Q8WVM7 1258 aa18.84■□□□□ 0.61
VAPA-204ENST00000577901 CHMP4CQ96CF2 233 aa18.84■□□□□ 0.61
VAPA-204ENST00000577901 AGBL1Q96MI9 1066 aa18.84■□□□□ 0.61
VAPA-204ENST00000577901 A1CFQ9NQ94 594 aaKnown RBP18.84■□□□□ 0.61
VAPA-204ENST00000577901 RNF146Q9NTX7 359 aa18.84■□□□□ 0.61
VAPA-204ENST00000577901 ZNF536O15090 1300 aa18.83■□□□□ 0.61
VAPA-204ENST00000577901 SOWAHBA6NEL2 793 aa18.83■□□□□ 0.6
VAPA-204ENST00000577901 TLR3O15455 904 aaKnown RBP18.83■□□□□ 0.6
VAPA-204ENST00000577901 MCCP23508 829 aa18.83■□□□□ 0.6
VAPA-204ENST00000577901 SLC1A4P43007 532 aa18.83■□□□□ 0.6
VAPA-204ENST00000577901 NKX3-2P78367 333 aa18.83■□□□□ 0.6
VAPA-204ENST00000577901 TNFAIP2Q03169 654 aa18.83■□□□□ 0.6
VAPA-204ENST00000577901 IMMTQ16891 758 aaKnown RBP18.83■□□□□ 0.6
VAPA-204ENST00000577901 BMP2KLQ5H9B9 411 aa18.83■□□□□ 0.6
VAPA-204ENST00000577901 RRP12Q5JTH9 1297 aaKnown RBP18.83■□□□□ 0.6
VAPA-204ENST00000577901 NOL8Q76FK4 1167 aaKnown RBP18.83■□□□□ 0.6
VAPA-204ENST00000577901 C16orf59Q7L2K0 433 aa18.83■□□□□ 0.6
VAPA-204ENST00000577901 FAM126BQ8IXS8 530 aa18.83■□□□□ 0.6
VAPA-204ENST00000577901 TMEM199Q8N511 208 aa18.83■□□□□ 0.6
VAPA-204ENST00000577901 TIFAQ96CG3 184 aa18.83■□□□□ 0.6
VAPA-204ENST00000577901 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.82■□□□□ 0.6
VAPA-204ENST00000577901 CSF2RAP15509 400 aa18.82■□□□□ 0.6
VAPA-204ENST00000577901 NT5C2P49902 561 aa18.82■□□□□ 0.6
VAPA-204ENST00000577901 BEX3Q00994 111 aa18.82■□□□□ 0.6
VAPA-204ENST00000577901 TKFCQ3LXA3 575 aa18.82■□□□□ 0.6
VAPA-204ENST00000577901 TMEM240Q5SV17 173 aa18.82■□□□□ 0.6
VAPA-204ENST00000577901 TRERF1Q96PN7 1200 aa18.82■□□□□ 0.6
VAPA-204ENST00000577901 PPP1R12CQ9BZL4 782 aa18.82■□□□□ 0.6
VAPA-204ENST00000577901 ZNF576Q9H609 170 aa18.82■□□□□ 0.6
VAPA-204ENST00000577901 PPP4R2Q9NY27 417 aa18.82■□□□□ 0.6
VAPA-204ENST00000577901 STX8Q9UNK0 236 aa18.82■□□□□ 0.6
VAPA-204ENST00000577901 ASTN1O14525 1302 aa18.81■□□□□ 0.6
VAPA-204ENST00000577901 ASB14A6NK59 587 aa18.81■□□□□ 0.6
VAPA-204ENST00000577901 SGSM2O43147 1006 aa18.81■□□□□ 0.6
VAPA-204ENST00000577901 PLA2G6O60733 806 aa18.81■□□□□ 0.6
VAPA-204ENST00000577901 ALAS1P13196 640 aa18.81■□□□□ 0.6
VAPA-204ENST00000577901 KCTD1Q719H9 257 aa18.81■□□□□ 0.6
VAPA-204ENST00000577901 SKAP1Q86WV1 359 aa18.81■□□□□ 0.6
VAPA-204ENST00000577901 IL25Q9H293 177 aa18.81■□□□□ 0.6
VAPA-204ENST00000577901 CD4P01730 458 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 ACRP10323 421 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 SNAP25P60880 206 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 RASIP1Q5U651 963 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 RCSD1Q6JBY9 416 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 PSRC1Q6PGN9 363 aaPredicted RBP18.8■□□□□ 0.6
VAPA-204ENST00000577901 CXCL17Q6UXB2 119 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 KIAA1211Q6ZU35 1233 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 ZNF365Q70YC5 407 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 TLK2Q86UE8 772 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 ESR2Q92731 530 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 IL17RBQ9NRM6 502 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 TCP11L1Q9NUJ3 509 aa18.8■□□□□ 0.6
VAPA-204ENST00000577901 GNEQ9Y223 722 aaKnown RBP18.8■□□□□ 0.6
VAPA-204ENST00000577901 MCM3APO60318 1980 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms