RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 USH1GQ495M9 461 aa11.38□□□□□ -0.59
NDE1-212ENST00000577101 WDR78Q5VTH9 848 aa11.38□□□□□ -0.59
NDE1-212ENST00000577101 TYW1BQ6NUM6 668 aa11.38□□□□□ -0.59
NDE1-212ENST00000577101 CCDC82Q8N4S0 544 aa11.38□□□□□ -0.59
NDE1-212ENST00000577101 CTCFLQ8NI51 663 aaPredicted RBP11.38□□□□□ -0.59
NDE1-212ENST00000577101 SH3TC2Q8TF17 1288 aa11.38□□□□□ -0.59
NDE1-212ENST00000577101 PIBF1Q8WXW3 757 aa11.38□□□□□ -0.59
NDE1-212ENST00000577101 COA7Q96BR5 231 aa11.38□□□□□ -0.59
NDE1-212ENST00000577101 TRERF1Q96PN7 1200 aa11.38□□□□□ -0.59
NDE1-212ENST00000577101 BRCA2P51587 3418 aa11.38□□□□□ -0.59
NDE1-212ENST00000577101 SOWAHBA6NEL2 793 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 ZBTB5O15062 677 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 CTDNEP1O95476 244 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 CALM1P0DP23 149 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 CALM2P0DP24 149 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 CALM3P0DP25 149 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 SMARCA1P28370 1054 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 METAP2P50579 478 aaKnown RBP eCLIP11.37□□□□□ -0.59
NDE1-212ENST00000577101 NEK4P51957 841 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 CNTN2Q02246 1040 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 SCRN1Q12765 414 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 PKN1Q16512 942 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 SLC30A10Q6XR72 485 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 HOMER1Q86YM7 354 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 ABRAQ8N0Z2 381 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 FAM133AQ8N9E0 248 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 CHST13Q8NET6 341 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 ZNF274Q96GC6 653 aaPredicted RBP11.37□□□□□ -0.59
NDE1-212ENST00000577101 MMP19Q99542 508 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 NUDT12Q9BQG2 462 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 COL20A1Q9P218 1284 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 KIAA1217Q5T5P2 1943 aa11.37□□□□□ -0.59
NDE1-212ENST00000577101 STRNO43815 780 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 ADCY3O60266 1144 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 KIF5BP33176 963 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 PRMT2P55345 433 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 GHRHRQ02643 423 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 STK3Q13188 491 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 MTFR1Q15390 333 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 PKN2Q16513 984 aaKnown RBP11.36□□□□□ -0.59
NDE1-212ENST00000577101 TKFCQ3LXA3 575 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 NOL8Q76FK4 1167 aaKnown RBP11.36□□□□□ -0.59
NDE1-212ENST00000577101 TRPV1Q8NER1 839 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 SOCS4Q8WXH5 440 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 ARMC5Q96C12 935 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 MAML3Q96JK9 1138 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 APBA2Q99767 749 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 ACAD9Q9H845 621 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 CYP39A1Q9NYL5 469 aa11.36□□□□□ -0.59
NDE1-212ENST00000577101 PNMA6FA0A0J9YX94 578 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 DHX16O60231 1041 aaKnown RBP11.35□□□□□ -0.59
NDE1-212ENST00000577101 PFKFB2O60825 505 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 FCER1AP12319 257 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 XRCC5P13010 732 aaKnown RBP11.35□□□□□ -0.59
NDE1-212ENST00000577101 HOXD10P28358 340 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 GRK4P32298 578 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 COPB2P35606 906 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 RGS2P41220 211 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 BAATQ14032 418 aaPredicted RBP11.35□□□□□ -0.59
NDE1-212ENST00000577101 MAP3K21Q5TCX8 1036 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 WWC2Q6AWC2 1192 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 FBXO11Q86XK2 927 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 NECAB1Q8N987 351 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 RAET1EQ8TD07 263 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 PXYLP1Q8TE99 480 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 GPKOWQ92917 476 aaPredicted RBP eCLIP11.35□□□□□ -0.59
NDE1-212ENST00000577101 PHKBQ93100 1093 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 ABHD8Q96I13 439 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 ZNF333Q96JL9 665 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 AMNQ9BXJ7 453 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 RBM28Q9NW13 759 aaKnown RBP11.35□□□□□ -0.59
NDE1-212ENST00000577101 ABCB11O95342 1321 aa11.35□□□□□ -0.59
NDE1-212ENST00000577101 DOCK5Q9H7D0 1870 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 EIF5BO60841 1220 aaKnown RBP11.34□□□□□ -0.59
NDE1-212ENST00000577101 SNAI1O95863 264 aaPredicted RBP11.34□□□□□ -0.59
NDE1-212ENST00000577101 INHAP05111 366 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 IFNAR1P17181 557 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 GNAQP50148 359 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 RPS6P62753 249 aaKnown RBP11.34□□□□□ -0.59
NDE1-212ENST00000577101 FGD1P98174 961 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 CACNB2Q08289 660 aaPredicted RBP11.34□□□□□ -0.59
NDE1-212ENST00000577101 PRAMEF19Q5SWL8 479 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 NSMFQ6X4W1 530 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 SYNE3Q6ZMZ3 975 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 TNS4Q8IZW8 715 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 AIFM3Q96NN9 605 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 LZTS2Q9BRK4 669 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 KATNBL1Q9H079 304 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 NAP1L2Q9ULW6 460 aaPredicted RBP11.34□□□□□ -0.59
NDE1-212ENST00000577101 CTDP1Q9Y5B0 961 aaPredicted RBP11.34□□□□□ -0.59
NDE1-212ENST00000577101 PCDHA1Q9Y5I3 950 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 IVNS1ABPQ9Y6Y0 642 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 V9GY48 417 aaPredicted RBP11.34□□□□□ -0.59
NDE1-212ENST00000577101 MYH7BA7E2Y1 1941 aa11.34□□□□□ -0.59
NDE1-212ENST00000577101 STXBP3O00186 592 aa11.33□□□□□ -0.6
NDE1-212ENST00000577101 ADCY6O43306 1168 aa11.33□□□□□ -0.6
NDE1-212ENST00000577101 PRPF3O43395 683 aaKnown RBP11.33□□□□□ -0.6
NDE1-212ENST00000577101 FDPSP14324 419 aaKnown RBP11.33□□□□□ -0.6
NDE1-212ENST00000577101 CCND3P30281 292 aaPredicted RBP11.33□□□□□ -0.6
NDE1-212ENST00000577101 CYP2C19P33261 490 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms