RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-208ENST00000575261 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-208ENST00000575261 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-208ENST00000575261 SOWAHBA6NEL2 793 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 CTAGE5O15320 804 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 RANBP6O60518 1105 aaKnown RBP12.35□□□□□ -0.43
TVP23B-208ENST00000575261 NMT2O60551 498 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 CCDC96Q2M329 555 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 RCSD1Q6JBY9 416 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 PSRC1Q6PGN9 363 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-208ENST00000575261 RASGRP2Q7LDG7 609 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 TMEM199Q8N511 208 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 DCAF4Q8WV16 495 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 EVI5LQ96CN4 794 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.35□□□□□ -0.43
TVP23B-208ENST00000575261 CYP39A1Q9NYL5 469 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 CCPG1Q9ULG6 757 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 MTMR7Q9Y216 660 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 ASTN1O14525 1302 aa12.35□□□□□ -0.43
TVP23B-208ENST00000575261 ORC4O43929 436 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 CABYRO75952 493 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 ICAM1P05362 532 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 NOVP48745 357 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 RRP1P56182 461 aaKnown RBP12.34□□□□□ -0.43
TVP23B-208ENST00000575261 BEX3Q00994 111 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 FSCN1Q16658 493 aaKnown RBP12.34□□□□□ -0.43
TVP23B-208ENST00000575261 MUM1L1Q5H9M0 696 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 VPS53Q5VIR6 699 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 FBXO16Q8IX29 292 aaPredicted RBP12.34□□□□□ -0.43
TVP23B-208ENST00000575261 TIFAQ96CG3 184 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 PPP1R12CQ9BZL4 782 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 AP5M1Q9H0R1 490 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 HELLSQ9NRZ9 838 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 TOMM22Q9NS69 142 aa12.34□□□□□ -0.43
TVP23B-208ENST00000575261 GNEQ9Y223 722 aaKnown RBP12.34□□□□□ -0.43
TVP23B-208ENST00000575261 ZEB2O60315 1214 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 CD4P01730 458 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 CSF2RAP15509 400 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 SNAP25P60880 206 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 ALX1Q15699 326 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 TMEM240Q5SV17 173 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 ANKRD45Q5TZF3 282 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 CXCL17Q6UXB2 119 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 NSMFQ6X4W1 530 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 SEZ6LQ9BYH1 1024 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 RANBP17Q9H2T7 1088 aaKnown RBP12.33□□□□□ -0.44
TVP23B-208ENST00000575261 VTA1Q9NP79 307 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 INCENPQ9NQS7 918 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 ZMYM6O95789 1325 aa12.33□□□□□ -0.44
TVP23B-208ENST00000575261 TTC28Q96AY4 2481 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 FGRP09769 529 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 TOP1P11387 765 aaKnown RBP12.32□□□□□ -0.44
TVP23B-208ENST00000575261 SMPD1P17405 629 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 PDE1AP54750 535 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 ITGA7Q13683 1181 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 RRP12Q5JTH9 1297 aaKnown RBP12.32□□□□□ -0.44
TVP23B-208ENST00000575261 RASIP1Q5U651 963 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 SYDE2Q5VT97 1194 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 IQSEC1Q6DN90 963 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 BTNL9Q6UXG8 535 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 EEPD1Q7L9B9 569 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 TICAM2Q86XR7 235 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 SLC43A3Q8NBI5 491 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 MTIF3Q9H2K0 278 aaKnown RBP12.32□□□□□ -0.44
TVP23B-208ENST00000575261 HIPK3Q9H422 1215 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 ZNF576Q9H609 170 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 ADD3Q9UEY8 706 aaKnown RBP12.32□□□□□ -0.44
TVP23B-208ENST00000575261 Q9Y3F1 56 aa12.32□□□□□ -0.44
TVP23B-208ENST00000575261 XIRP2A4UGR9 3374 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 LOC102724159A0A0B4J2E5 919 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 A0A0D9SFI3 127 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 DYNC1LI2O43237 492 aaPredicted RBP12.31□□□□□ -0.44
TVP23B-208ENST00000575261 FGAP02671 866 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 ACRP10323 421 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 CYP2C18P33260 490 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 SLC16A2P36021 539 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 GRIN2CQ14957 1233 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 PWP2Q15269 919 aaKnown RBP12.31□□□□□ -0.44
TVP23B-208ENST00000575261 MCMDC2Q4G0Z9 681 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 TAPT1Q6NXT6 567 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 C16orf59Q7L2K0 433 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 MORC4Q8TE76 937 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 PBX4Q9BYU1 374 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 IL23AQ9NPF7 189 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 PDGFCQ9NRA1 345 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 PNMA2Q9UL42 364 aa12.31□□□□□ -0.44
TVP23B-208ENST00000575261 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
TVP23B-208ENST00000575261 FRMPD2Q68DX3 1309 aaPredicted RBP12.31□□□□□ -0.44
TVP23B-208ENST00000575261 TRANK1O15050 2925 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 PTPDC1A2A3K4 754 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 NFIBO00712 420 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 B4GALT4O60513 344 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 HSPD1P10809 573 aaKnown RBP12.3□□□□□ -0.44
TVP23B-208ENST00000575261 PDHBP11177 359 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 PCP11498 1178 aaKnown RBP12.3□□□□□ -0.44
TVP23B-208ENST00000575261 PTGS1P23219 599 aa12.3□□□□□ -0.44
TVP23B-208ENST00000575261 ALDH5A1P51649 535 aaPredicted RBP12.3□□□□□ -0.44
TVP23B-208ENST00000575261 HDAC1Q13547 482 aaPredicted RBP12.3□□□□□ -0.44
TVP23B-208ENST00000575261 BAATQ14032 418 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms