RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 HERVK_113P62684 666 aa13.66□□□□□ -0.22
PRPF8-212ENST00000575116 MKRN3Q13064 507 aaKnown RBP13.66□□□□□ -0.22
PRPF8-212ENST00000575116 DEFB115Q30KQ5 88 aa13.66□□□□□ -0.22
PRPF8-212ENST00000575116 ATL3Q6DD88 541 aa13.66□□□□□ -0.22
PRPF8-212ENST00000575116 NOSTRINQ8IVI9 506 aa13.66□□□□□ -0.22
PRPF8-212ENST00000575116 REM2Q8IYK8 340 aaPredicted RBP13.66□□□□□ -0.22
PRPF8-212ENST00000575116 TNPO1Q92973 898 aaKnown RBP13.66□□□□□ -0.22
PRPF8-212ENST00000575116 CUL5Q93034 780 aa13.66□□□□□ -0.22
PRPF8-212ENST00000575116 PSTPIP2Q9H939 334 aa13.66□□□□□ -0.22
PRPF8-212ENST00000575116 MAP3K20Q9NYL2 800 aaKnown RBP13.66□□□□□ -0.22
PRPF8-212ENST00000575116 CCPG1Q9ULG6 757 aa13.66□□□□□ -0.22
PRPF8-212ENST00000575116 RABGAP1Q9Y3P9 1069 aa13.66□□□□□ -0.22
PRPF8-212ENST00000575116 STAT3P40763 770 aa13.65□□□□□ -0.22
PRPF8-212ENST00000575116 SREBF2Q12772 1141 aa13.65□□□□□ -0.22
PRPF8-212ENST00000575116 USH1GQ495M9 461 aa13.65□□□□□ -0.22
PRPF8-212ENST00000575116 FOXD4L5Q5VV16 416 aaPredicted RBP13.65□□□□□ -0.22
PRPF8-212ENST00000575116 FERMT3Q86UX7 667 aa13.65□□□□□ -0.22
PRPF8-212ENST00000575116 MCF2L2Q86YR7 1114 aa13.65□□□□□ -0.22
PRPF8-212ENST00000575116 FOXD4L4Q8WXT5 416 aaPredicted RBP13.65□□□□□ -0.22
PRPF8-212ENST00000575116 TNFRSF25Q93038 417 aa13.65□□□□□ -0.22
PRPF8-212ENST00000575116 AGBL1Q96MI9 1066 aa13.65□□□□□ -0.22
PRPF8-212ENST00000575116 TEX13BQ9BXU2 312 aa13.65□□□□□ -0.22
PRPF8-212ENST00000575116 RAVER2Q9HCJ3 691 aaKnown RBP13.65□□□□□ -0.22
PRPF8-212ENST00000575116 ZNF214Q9UL59 606 aaPredicted RBP13.65□□□□□ -0.22
PRPF8-212ENST00000575116 KIF28PB7ZC32 967 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 PIK3CDO00329 1044 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 COPB2P35606 906 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 TM4SF4P48230 202 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 GCLCP48506 637 aaPredicted RBP13.64□□□□□ -0.23
PRPF8-212ENST00000575116 CLK2P49760 499 aaKnown RBP13.64□□□□□ -0.23
PRPF8-212ENST00000575116 GHRHRQ02643 423 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 TMEM132BQ14DG7 1078 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 KRT25Q7Z3Z0 450 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 CPXCR1Q8N123 301 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 OXER1Q8TDS5 423 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 PTPN18Q99952 460 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 PCDHA6Q9UN73 950 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 PCDHA8Q9Y5H6 950 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 A0A0G2JMZ2 1700 aa13.64□□□□□ -0.23
PRPF8-212ENST00000575116 COL11A1P12107 1806 aaPredicted RBP13.63□□□□□ -0.23
PRPF8-212ENST00000575116 MEIS2O14770 477 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 SLC25A27O95847 323 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 FOSP01100 380 aaPredicted RBP13.63□□□□□ -0.23
PRPF8-212ENST00000575116 ALAS1P13196 640 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 NOGQ13253 232 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 NR5A1Q13285 461 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 RILPL1Q5EBL4 403 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 SNRNP48Q6IEG0 339 aaKnown RBP13.63□□□□□ -0.23
PRPF8-212ENST00000575116 IFNL1Q8IU54 200 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 RIOX2Q8IUF8 465 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 REXO1Q8N1G1 1221 aaKnown RBP13.63□□□□□ -0.23
PRPF8-212ENST00000575116 FAM43AQ8N2R8 423 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 CHST13Q8NET6 341 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 ZNF396Q96N95 335 aaPredicted RBP13.63□□□□□ -0.23
PRPF8-212ENST00000575116 TRERF1Q96PN7 1200 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 PARK7Q99497 189 aaKnown RBP13.63□□□□□ -0.23
PRPF8-212ENST00000575116 BTBD7Q9P203 1132 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 RBPJLQ9UBG7 517 aa13.63□□□□□ -0.23
PRPF8-212ENST00000575116 CCDC194A0A1B0GVG4 234 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 GCOM1H8Y6P7 765 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-212ENST00000575116 OPLAHO14841 1288 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 CNMDO75829 334 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 POLR2MP0CAP2 368 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 TRAPPC10P48553 1259 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 HSD17B4P51659 736 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 AP3B2Q13367 1082 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 MYSM1Q5VVJ2 828 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 POTEEQ6S8J3 1075 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.62□□□□□ -0.23
PRPF8-212ENST00000575116 SMCR8Q8TEV9 937 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-212ENST00000575116 CLEC4DQ8WXI8 215 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 GBP4Q96PP9 640 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 SPATC1LQ9H0A9 340 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 BIN2Q9UBW5 565 aaPredicted RBP13.62□□□□□ -0.23
PRPF8-212ENST00000575116 FBXO40Q9UH90 709 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 CFAP45Q9UL16 551 aa13.62□□□□□ -0.23
PRPF8-212ENST00000575116 NOL7Q9UMY1 257 aaKnown RBP13.62□□□□□ -0.23
PRPF8-212ENST00000575116 CYP2C8P10632 490 aa13.61□□□□□ -0.23
PRPF8-212ENST00000575116 PLS1Q14651 629 aa13.61□□□□□ -0.23
PRPF8-212ENST00000575116 NONOQ15233 471 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRPF8-212ENST00000575116 CYP4F22Q6NT55 531 aa13.61□□□□□ -0.23
PRPF8-212ENST00000575116 PAXIP1Q6ZW49 1069 aaPredicted RBP13.61□□□□□ -0.23
PRPF8-212ENST00000575116 SHCBP1Q8NEM2 672 aa13.61□□□□□ -0.23
PRPF8-212ENST00000575116 ACAD9Q9H845 621 aa13.61□□□□□ -0.23
PRPF8-212ENST00000575116 RNF146Q9NTX7 359 aa13.61□□□□□ -0.23
PRPF8-212ENST00000575116 MORF4L1Q9UBU8 362 aa13.61□□□□□ -0.23
PRPF8-212ENST00000575116 IGF2BP3O00425 579 aaKnown RBP eCLIP13.6□□□□□ -0.23
PRPF8-212ENST00000575116 ADAMTS3O15072 1205 aa13.6□□□□□ -0.23
PRPF8-212ENST00000575116 BAG4O95429 457 aaKnown RBP13.6□□□□□ -0.23
PRPF8-212ENST00000575116 ALDH1A1P00352 501 aa13.6□□□□□ -0.23
PRPF8-212ENST00000575116 CFBP00751 764 aa13.6□□□□□ -0.23
PRPF8-212ENST00000575116 ERVK-9P63128 1117 aa13.6□□□□□ -0.23
PRPF8-212ENST00000575116 ERVK-24P63145 666 aa13.6□□□□□ -0.23
PRPF8-212ENST00000575116 KRT85P78386 507 aa13.6□□□□□ -0.23
PRPF8-212ENST00000575116 CCNA1P78396 465 aa13.6□□□□□ -0.23
PRPF8-212ENST00000575116 DNM1Q05193 864 aaKnown RBP13.6□□□□□ -0.23
PRPF8-212ENST00000575116 MUM1L1Q5H9M0 696 aa13.6□□□□□ -0.23
PRPF8-212ENST00000575116 JAKMIP3Q5VZ66 844 aa13.6□□□□□ -0.23
PRPF8-212ENST00000575116 USP17L6PQ6QN14 398 aa13.6□□□□□ -0.23
PRPF8-212ENST00000575116 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms