RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 NMIQ13287 307 aaPredicted RBP17.97■□□□□ 0.47
CTNS-209ENST00000574776 DCAF4Q8WV16 495 aa17.97■□□□□ 0.47
CTNS-209ENST00000574776 RILPL2Q969X0 211 aa17.97■□□□□ 0.47
CTNS-209ENST00000574776 RNPC3Q96LT9 517 aaKnown RBP17.97■□□□□ 0.47
CTNS-209ENST00000574776 TMEM47Q9BQJ4 181 aa17.97■□□□□ 0.47
CTNS-209ENST00000574776 CYP39A1Q9NYL5 469 aa17.97■□□□□ 0.47
CTNS-209ENST00000574776 CCPG1Q9ULG6 757 aa17.97■□□□□ 0.47
CTNS-209ENST00000574776 ARVCFO00192 962 aa17.96■□□□□ 0.47
CTNS-209ENST00000574776 TIMP1P01033 207 aa17.96■□□□□ 0.47
CTNS-209ENST00000574776 TOP1P11387 765 aaKnown RBP17.96■□□□□ 0.47
CTNS-209ENST00000574776 HAND2P61296 217 aa17.96■□□□□ 0.47
CTNS-209ENST00000574776 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
CTNS-209ENST00000574776 NSMFQ6X4W1 530 aa17.96■□□□□ 0.47
CTNS-209ENST00000574776 EEPD1Q7L9B9 569 aa17.96■□□□□ 0.47
CTNS-209ENST00000574776 ZNF589Q86UQ0 364 aaPredicted RBP17.96■□□□□ 0.47
CTNS-209ENST00000574776 PURBQ96QR8 312 aaKnown RBP17.96■□□□□ 0.47
CTNS-209ENST00000574776 CDX2Q99626 313 aaPredicted RBP17.96■□□□□ 0.47
CTNS-209ENST00000574776 GPCPD1Q9NPB8 672 aa17.96■□□□□ 0.47
CTNS-209ENST00000574776 PDGFCQ9NRA1 345 aa17.96■□□□□ 0.47
CTNS-209ENST00000574776 ASTN1O14525 1302 aa17.96■□□□□ 0.46
CTNS-209ENST00000574776 A0A0U1RQG5 324 aaPredicted RBP17.95■□□□□ 0.46
CTNS-209ENST00000574776 DYNC1LI2O43237 492 aaPredicted RBP17.95■□□□□ 0.46
CTNS-209ENST00000574776 ICAM1P05362 532 aa17.95■□□□□ 0.46
CTNS-209ENST00000574776 PTGS1P23219 599 aa17.95■□□□□ 0.46
CTNS-209ENST00000574776 TICAM2Q86XR7 235 aa17.95■□□□□ 0.46
CTNS-209ENST00000574776 RANBP17Q9H2T7 1088 aaKnown RBP17.95■□□□□ 0.46
CTNS-209ENST00000574776 TTYH1Q9H313 450 aaPredicted RBP17.95■□□□□ 0.46
CTNS-209ENST00000574776 TCP11L1Q9NUJ3 509 aa17.95■□□□□ 0.46
CTNS-209ENST00000574776 TBX21Q9UL17 535 aa17.95■□□□□ 0.46
CTNS-209ENST00000574776 MROH7Q68CQ1 1323 aa17.95■□□□□ 0.46
CTNS-209ENST00000574776 FRMPD2Q68DX3 1309 aaPredicted RBP17.95■□□□□ 0.46
CTNS-209ENST00000574776 SMPD1P17405 629 aa17.94■□□□□ 0.46
CTNS-209ENST00000574776 NKX3-2P78367 333 aa17.94■□□□□ 0.46
CTNS-209ENST00000574776 TMEM63BQ5T3F8 832 aa17.94■□□□□ 0.46
CTNS-209ENST00000574776 SYDE2Q5VT97 1194 aa17.94■□□□□ 0.46
CTNS-209ENST00000574776 IQSEC1Q6DN90 963 aa17.94■□□□□ 0.46
CTNS-209ENST00000574776 MFSD5Q6N075 450 aa17.94■□□□□ 0.46
CTNS-209ENST00000574776 TAPT1Q6NXT6 567 aa17.94■□□□□ 0.46
CTNS-209ENST00000574776 CXCL17Q6UXB2 119 aa17.94■□□□□ 0.46
CTNS-209ENST00000574776 BTNL9Q6UXG8 535 aa17.94■□□□□ 0.46
CTNS-209ENST00000574776 AP5M1Q9H0R1 490 aa17.94■□□□□ 0.46
CTNS-209ENST00000574776 RWDD1Q9H446 243 aaPredicted RBP17.94■□□□□ 0.46
CTNS-209ENST00000574776 GNEQ9Y223 722 aaKnown RBP17.94■□□□□ 0.46
CTNS-209ENST00000574776 CUL9Q8IWT3 2517 aa17.94■□□□□ 0.46
CTNS-209ENST00000574776 BAATQ14032 418 aaPredicted RBP17.93■□□□□ 0.46
CTNS-209ENST00000574776 MFSD6Q6ZSS7 791 aa17.93■□□□□ 0.46
CTNS-209ENST00000574776 TLK2Q86UE8 772 aa17.93■□□□□ 0.46
CTNS-209ENST00000574776 FBXO16Q8IX29 292 aaPredicted RBP17.93■□□□□ 0.46
CTNS-209ENST00000574776 CCDC171Q6TFL3 1326 aa17.93■□□□□ 0.46
CTNS-209ENST00000574776 IGHDP01880 384 aa17.92■□□□□ 0.46
CTNS-209ENST00000574776 SDSP20132 328 aa17.92■□□□□ 0.46
CTNS-209ENST00000574776 FSCN1Q16658 493 aaKnown RBP17.92■□□□□ 0.46
CTNS-209ENST00000574776 AKNAD1Q5T1N1 836 aa17.92■□□□□ 0.46
CTNS-209ENST00000574776 KIAA1211Q6ZU35 1233 aa17.92■□□□□ 0.46
CTNS-209ENST00000574776 C16orf59Q7L2K0 433 aa17.92■□□□□ 0.46
CTNS-209ENST00000574776 FAM126BQ8IXS8 530 aa17.92■□□□□ 0.46
CTNS-209ENST00000574776 SMC5Q8IY18 1101 aa17.92■□□□□ 0.46
CTNS-209ENST00000574776 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
CTNS-209ENST00000574776 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.92■□□□□ 0.46
CTNS-209ENST00000574776 PPP1R12CQ9BZL4 782 aa17.92■□□□□ 0.46
CTNS-209ENST00000574776 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.91■□□□□ 0.46
CTNS-209ENST00000574776 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.91■□□□□ 0.46
CTNS-209ENST00000574776 NFIBO00712 420 aa17.91■□□□□ 0.46
CTNS-209ENST00000574776 TLR3O15455 904 aaKnown RBP17.91■□□□□ 0.46
CTNS-209ENST00000574776 PDHBP11177 359 aa17.91■□□□□ 0.46
CTNS-209ENST00000574776 CSF2RAP15509 400 aa17.91■□□□□ 0.46
CTNS-209ENST00000574776 AAMPQ13685 434 aa17.91■□□□□ 0.46
CTNS-209ENST00000574776 PLEKHM2Q8IWE5 1019 aa17.91■□□□□ 0.46
CTNS-209ENST00000574776 MORC4Q8TE76 937 aa17.91■□□□□ 0.46
CTNS-209ENST00000574776 MYLIPQ8WY64 445 aa17.91■□□□□ 0.46
CTNS-209ENST00000574776 TTC14Q96N46 770 aa17.91■□□□□ 0.46
CTNS-209ENST00000574776 ZMYM6O95789 1325 aa17.91■□□□□ 0.46
CTNS-209ENST00000574776 PTPDC1A2A3K4 754 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 ZEB2O60315 1214 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 CABYRO75952 493 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 CD4P01730 458 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 ACRP10323 421 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 CYP2C18P33260 490 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 MFAP1P55081 439 aaKnown RBP17.9■□□□□ 0.46
CTNS-209ENST00000574776 PPIGQ13427 754 aaKnown RBP eCLIP17.9■□□□□ 0.46
CTNS-209ENST00000574776 ITGA7Q13683 1181 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 TMEM240Q5SV17 173 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 CHD1LQ86WJ1 897 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 TBC1D10CQ8IV04 446 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.9■□□□□ 0.46
CTNS-209ENST00000574776 TMEM199Q8N511 208 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 SLC43A3Q8NBI5 491 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 ZKSCAN3Q9BRR0 538 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 VTA1Q9NP79 307 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 ADD3Q9UEY8 706 aaKnown RBP17.9■□□□□ 0.46
CTNS-209ENST00000574776 Q9Y3F1 56 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 GRIN2DO15399 1336 aa17.9■□□□□ 0.46
CTNS-209ENST00000574776 PCP11498 1178 aaKnown RBP17.89■□□□□ 0.45
CTNS-209ENST00000574776 CALML3P27482 149 aa17.89■□□□□ 0.45
CTNS-209ENST00000574776 ALDH5A1P51649 535 aaPredicted RBP17.89■□□□□ 0.45
CTNS-209ENST00000574776 ZNF543Q08ER8 600 aa17.89■□□□□ 0.45
CTNS-209ENST00000574776 CLEC4DQ8WXI8 215 aa17.89■□□□□ 0.45
CTNS-209ENST00000574776 UNC80Q8N2C7 3258 aa17.89■□□□□ 0.45
CTNS-209ENST00000574776 LCTP09848 1927 aa17.88■□□□□ 0.45
CTNS-209ENST00000574776 ZNF213O14771 459 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms