RNA–Protein interactions for RNA: ENST00000574266.1

ABR-227, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-227ENST00000574266 SZT2Q5T011 3432 aa20.41■□□□□ 0.86
ABR-227ENST00000574266 A0A0U1RQG5 324 aaPredicted RBP20.41■□□□□ 0.86
ABR-227ENST00000574266 TRIM43BA6NCK2 446 aa20.41■□□□□ 0.86
ABR-227ENST00000574266 CST5P28325 142 aaPredicted RBP20.41■□□□□ 0.86
ABR-227ENST00000574266 SHHQ15465 462 aa20.41■□□□□ 0.86
ABR-227ENST00000574266 IQSEC1Q6DN90 963 aa20.41■□□□□ 0.86
ABR-227ENST00000574266 FAM109BQ6ICB4 259 aaPredicted RBP20.41■□□□□ 0.86
ABR-227ENST00000574266 Q7L0L9 218 aa20.41■□□□□ 0.86
ABR-227ENST00000574266 SH3RF1Q7Z6J0 888 aa20.41■□□□□ 0.86
ABR-227ENST00000574266 TRIM43Q96BQ3 446 aaPredicted RBP20.41■□□□□ 0.86
ABR-227ENST00000574266 RANBP17Q9H2T7 1088 aaKnown RBP20.41■□□□□ 0.86
ABR-227ENST00000574266 OSBPL3Q9H4L5 887 aa20.41■□□□□ 0.86
ABR-227ENST00000574266 ZNF536O15090 1300 aa20.41■□□□□ 0.86
ABR-227ENST00000574266 PTPDC1A2A3K4 754 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 KIAA0355O15063 1070 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 CABYRO75952 493 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 SLC16A2P36021 539 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 NOVP48745 357 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 FPGSQ05932 587 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 IMMTQ16891 758 aaKnown RBP20.4■□□□□ 0.86
ABR-227ENST00000574266 FRMPD2Q68DX3 1309 aaPredicted RBP20.4■□□□□ 0.86
ABR-227ENST00000574266 BTNL9Q6UXG8 535 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 ANKRD33Q7Z3H0 272 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 ZNF589Q86UQ0 364 aaPredicted RBP20.4■□□□□ 0.86
ABR-227ENST00000574266 PLEKHM2Q8IWE5 1019 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 EXOC6Q8TAG9 804 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 CYP39A1Q9NYL5 469 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 STXBP5LQ9Y2K9 1186 aa20.4■□□□□ 0.86
ABR-227ENST00000574266 SOWAHBA6NEL2 793 aa20.39■□□□□ 0.85
ABR-227ENST00000574266 GPATCH4Q5T3I0 446 aaKnown RBP20.39■□□□□ 0.85
ABR-227ENST00000574266 TTBK2Q6IQ55 1244 aa20.39■□□□□ 0.85
ABR-227ENST00000574266 KIAA1211Q6ZU35 1233 aa20.39■□□□□ 0.85
ABR-227ENST00000574266 SEZ6LQ9BYH1 1024 aa20.39■□□□□ 0.85
ABR-227ENST00000574266 UPF3AQ9H1J1 476 aaKnown RBP20.39■□□□□ 0.85
ABR-227ENST00000574266 KAT14Q9H8E8 782 aa20.39■□□□□ 0.85
ABR-227ENST00000574266 MTMR10Q9NXD2 777 aa20.39■□□□□ 0.85
ABR-227ENST00000574266 LOC102724159A0A0B4J2E5 919 aa20.38■□□□□ 0.85
ABR-227ENST00000574266 ARVCFO00192 962 aa20.38■□□□□ 0.85
ABR-227ENST00000574266 DYNC1LI2O43237 492 aaPredicted RBP20.38■□□□□ 0.85
ABR-227ENST00000574266 IGHDP01880 384 aa20.38■□□□□ 0.85
ABR-227ENST00000574266 PWP2Q15269 919 aaKnown RBP20.38■□□□□ 0.85
ABR-227ENST00000574266 BRDTQ58F21 947 aaPredicted RBP20.38■□□□□ 0.85
ABR-227ENST00000574266 MUM1L1Q5H9M0 696 aa20.38■□□□□ 0.85
ABR-227ENST00000574266 DGKHQ86XP1 1220 aa20.38■□□□□ 0.85
ABR-227ENST00000574266 RNPC3Q96LT9 517 aaKnown RBP20.38■□□□□ 0.85
ABR-227ENST00000574266 VTA1Q9NP79 307 aa20.38■□□□□ 0.85
ABR-227ENST00000574266 Q9Y3F1 56 aa20.38■□□□□ 0.85
ABR-227ENST00000574266 TIMP1P01033 207 aa20.37■□□□□ 0.85
ABR-227ENST00000574266 PDHBP11177 359 aa20.37■□□□□ 0.85
ABR-227ENST00000574266 FAAP100Q0VG06 881 aa20.37■□□□□ 0.85
ABR-227ENST00000574266 BAATQ14032 418 aaPredicted RBP20.37■□□□□ 0.85
ABR-227ENST00000574266 FSCN1Q16658 493 aaKnown RBP20.37■□□□□ 0.85
ABR-227ENST00000574266 RNF207Q6ZRF8 634 aa20.37■□□□□ 0.85
ABR-227ENST00000574266 EEPD1Q7L9B9 569 aa20.37■□□□□ 0.85
ABR-227ENST00000574266 TLK2Q86UE8 772 aa20.37■□□□□ 0.85
ABR-227ENST00000574266 TMEM199Q8N511 208 aa20.37■□□□□ 0.85
ABR-227ENST00000574266 FGD4Q96M96 766 aa20.37■□□□□ 0.85
ABR-227ENST00000574266 KRT23Q9C075 422 aa20.37■□□□□ 0.85
ABR-227ENST00000574266 CALML3P27482 149 aa20.36■□□□□ 0.85
ABR-227ENST00000574266 PPIGQ13427 754 aaKnown RBP eCLIP20.36■□□□□ 0.853e-9■■■■□ 19.9
ABR-227ENST00000574266 CCSAPQ6IQ19 270 aaPredicted RBP20.36■□□□□ 0.85
ABR-227ENST00000574266 ZKSCAN3Q9BRR0 538 aa20.36■□□□□ 0.85
ABR-227ENST00000574266 CNNM2Q9H8M5 875 aa20.36■□□□□ 0.85
ABR-227ENST00000574266 GPHNQ9NQX3 736 aaPredicted RBP20.36■□□□□ 0.85
ABR-227ENST00000574266 MYADML2A6NDP7 307 aa20.35■□□□□ 0.85
ABR-227ENST00000574266 DHX16O60231 1041 aaKnown RBP20.35■□□□□ 0.85
ABR-227ENST00000574266 SMAD3P84022 425 aaKnown RBP20.35■□□□□ 0.85
ABR-227ENST00000574266 BEX3Q00994 111 aa20.35■□□□□ 0.85
ABR-227ENST00000574266 PDE4DQ08499 809 aa20.35■□□□□ 0.85
ABR-227ENST00000574266 ZNF543Q08ER8 600 aa20.35■□□□□ 0.85
ABR-227ENST00000574266 C9orf50Q5SZB4 431 aa20.35■□□□□ 0.85
ABR-227ENST00000574266 FAM161BQ96MY7 647 aa20.35■□□□□ 0.85
ABR-227ENST00000574266 UBAC1Q9BSL1 405 aa20.35■□□□□ 0.85
ABR-227ENST00000574266 DSCC1Q9BVC3 393 aa20.35■□□□□ 0.85
ABR-227ENST00000574266 KDM4AO75164 1064 aa20.34■□□□□ 0.85
ABR-227ENST00000574266 TRDNQ13061 729 aa20.34■□□□□ 0.85
ABR-227ENST00000574266 MFSD5Q6N075 450 aa20.34■□□□□ 0.85
ABR-227ENST00000574266 FBXO16Q8IX29 292 aaPredicted RBP20.34■□□□□ 0.85
ABR-227ENST00000574266 RUFY2Q8WXA3 655 aa20.34■□□□□ 0.85
ABR-227ENST00000574266 KATNBL1Q9H079 304 aa20.34■□□□□ 0.85
ABR-227ENST00000574266 RAD50Q92878 1312 aa20.33■□□□□ 0.85
ABR-227ENST00000574266 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.33■□□□□ 0.85
ABR-227ENST00000574266 SMPD1P17405 629 aa20.33■□□□□ 0.85
ABR-227ENST00000574266 CDK7P50613 346 aa20.33■□□□□ 0.85
ABR-227ENST00000574266 ALDH5A1P51649 535 aaPredicted RBP20.33■□□□□ 0.85
ABR-227ENST00000574266 NKX3-2P78367 333 aa20.33■□□□□ 0.85
ABR-227ENST00000574266 CXCL17Q6UXB2 119 aa20.33■□□□□ 0.85
ABR-227ENST00000574266 RASGRP2Q7LDG7 609 aa20.33■□□□□ 0.85
ABR-227ENST00000574266 TBC1D10CQ8IV04 446 aa20.33■□□□□ 0.85
ABR-227ENST00000574266 PNMA1Q8ND90 353 aa20.33■□□□□ 0.85
ABR-227ENST00000574266 ZSCAN10Q96SZ4 725 aaPredicted RBP20.33■□□□□ 0.85
ABR-227ENST00000574266 WDR11Q9BZH6 1224 aa20.33■□□□□ 0.85
ABR-227ENST00000574266 MTIF3Q9H2K0 278 aaKnown RBP20.33■□□□□ 0.85
ABR-227ENST00000574266 POLR3EQ9NVU0 708 aa20.33■□□□□ 0.85
ABR-227ENST00000574266 GNEQ9Y223 722 aaKnown RBP20.33■□□□□ 0.85
ABR-227ENST00000574266 SUPT16HQ9Y5B9 1047 aaKnown RBP20.33■□□□□ 0.85
ABR-227ENST00000574266 LAMA3Q16787 3333 aa20.32■□□□□ 0.84
ABR-227ENST00000574266 WDR19Q8NEZ3 1342 aa20.32■□□□□ 0.84
ABR-227ENST00000574266 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.32■□□□□ 0.84
ABR-227ENST00000574266 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms