RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 CST5P28325 142 aaPredicted RBP24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 GNASQ5JWF2 1037 aa24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 C9orf50Q5SZB4 431 aa24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 CCSAPQ6IQ19 270 aaPredicted RBP24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 CWC27Q6UX04 472 aaKnown RBP24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 GLT1D1Q96MS3 346 aa24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 KATNBL1Q9H079 304 aa24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 UPF3AQ9H1J1 476 aaKnown RBP24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 RANBP17Q9H2T7 1088 aaKnown RBP24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 OSBPL3Q9H4L5 887 aa24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 RNF41Q9H4P4 317 aaPredicted RBP24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 TMEM39AQ9NV64 488 aa24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 DDX49Q9Y6V7 483 aaKnown RBP24.88■■□□□ 1.57
CHRNB1-206ENST00000574054 ASGR1P07306 291 aa24.87■■□□□ 1.57
CHRNB1-206ENST00000574054 RAG1P15918 1043 aa24.87■■□□□ 1.57
CHRNB1-206ENST00000574054 GJA9P57773 515 aa24.87■■□□□ 1.57
CHRNB1-206ENST00000574054 TNFAIP2Q03169 654 aa24.87■■□□□ 1.57
CHRNB1-206ENST00000574054 BTNL9Q6UXG8 535 aa24.87■■□□□ 1.57
CHRNB1-206ENST00000574054 MTMR10Q9NXD2 777 aa24.87■■□□□ 1.57
CHRNB1-206ENST00000574054 ZNF213O14771 459 aa24.86■■□□□ 1.57
CHRNB1-206ENST00000574054 KIAA0355O15063 1070 aa24.86■■□□□ 1.57
CHRNB1-206ENST00000574054 ITGB8P26012 769 aa24.86■■□□□ 1.57
CHRNB1-206ENST00000574054 ANKRD33Q7Z3H0 272 aa24.86■■□□□ 1.57
CHRNB1-206ENST00000574054 SLC17A8Q8NDX2 589 aa24.86■■□□□ 1.57
CHRNB1-206ENST00000574054 ESR2Q92731 530 aa24.86■■□□□ 1.57
CHRNB1-206ENST00000574054 NEDD4P46934 1319 aa24.86■■□□□ 1.57
CHRNB1-206ENST00000574054 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.85■■□□□ 1.57
CHRNB1-206ENST00000574054 PDHBP11177 359 aa24.85■■□□□ 1.57
CHRNB1-206ENST00000574054 FAAP100Q0VG06 881 aa24.85■■□□□ 1.57
CHRNB1-206ENST00000574054 EEPD1Q7L9B9 569 aa24.85■■□□□ 1.57
CHRNB1-206ENST00000574054 TTC14Q96N46 770 aa24.85■■□□□ 1.57
CHRNB1-206ENST00000574054 TOX2Q96NM4 488 aa24.85■■□□□ 1.57
CHRNB1-206ENST00000574054 PURBQ96QR8 312 aaKnown RBP24.85■■□□□ 1.57
CHRNB1-206ENST00000574054 ASTN1O14525 1302 aa24.85■■□□□ 1.57
CHRNB1-206ENST00000574054 ELP1O95163 1332 aa24.85■■□□□ 1.57
CHRNB1-206ENST00000574054 HIP1O00291 1037 aa24.84■■□□□ 1.57
CHRNB1-206ENST00000574054 BEX3Q00994 111 aa24.84■■□□□ 1.57
CHRNB1-206ENST00000574054 FBXO16Q8IX29 292 aaPredicted RBP24.84■■□□□ 1.57
CHRNB1-206ENST00000574054 ZKSCAN3Q9BRR0 538 aa24.84■■□□□ 1.57
CHRNB1-206ENST00000574054 A0A0U1RQG5 324 aaPredicted RBP24.83■■□□□ 1.57
CHRNB1-206ENST00000574054 NFIBO00712 420 aa24.83■■□□□ 1.57
CHRNB1-206ENST00000574054 ZNF543Q08ER8 600 aa24.83■■□□□ 1.57
CHRNB1-206ENST00000574054 BAATQ14032 418 aaPredicted RBP24.83■■□□□ 1.57
CHRNB1-206ENST00000574054 TLK2Q86UE8 772 aa24.83■■□□□ 1.57
CHRNB1-206ENST00000574054 FAM161BQ96MY7 647 aa24.83■■□□□ 1.57
CHRNB1-206ENST00000574054 AP5M1Q9H0R1 490 aa24.83■■□□□ 1.57
CHRNB1-206ENST00000574054 STXBP5LQ9Y2K9 1186 aa24.83■■□□□ 1.57
CHRNB1-206ENST00000574054 MROH7Q68CQ1 1323 aa24.83■■□□□ 1.56
CHRNB1-206ENST00000574054 PTPDC1A2A3K4 754 aa24.82■■□□□ 1.56
CHRNB1-206ENST00000574054 FPGSQ05932 587 aa24.82■■□□□ 1.56
CHRNB1-206ENST00000574054 PDGFCQ9NRA1 345 aa24.82■■□□□ 1.56
CHRNB1-206ENST00000574054 CTAGE5O15320 804 aa24.81■■□□□ 1.56
CHRNB1-206ENST00000574054 DYNC1LI2O43237 492 aaPredicted RBP24.81■■□□□ 1.56
CHRNB1-206ENST00000574054 SMPD1P17405 629 aa24.81■■□□□ 1.56
CHRNB1-206ENST00000574054 PTGS1P23219 599 aa24.81■■□□□ 1.56
CHRNB1-206ENST00000574054 EPHB4P54760 987 aa24.81■■□□□ 1.56
CHRNB1-206ENST00000574054 FAM109BQ6ICB4 259 aaPredicted RBP24.81■■□□□ 1.56
CHRNB1-206ENST00000574054 RNPC3Q96LT9 517 aaKnown RBP24.81■■□□□ 1.56
CHRNB1-206ENST00000574054 GNEQ9Y223 722 aaKnown RBP24.81■■□□□ 1.56
CHRNB1-206ENST00000574054 ARVCFO00192 962 aa24.8■■□□□ 1.56
CHRNB1-206ENST00000574054 KDM4AO75164 1064 aa24.8■■□□□ 1.56
CHRNB1-206ENST00000574054 FSCN1Q16658 493 aaKnown RBP24.8■■□□□ 1.56
CHRNB1-206ENST00000574054 ZNF697Q5TEC3 545 aa24.8■■□□□ 1.56
CHRNB1-206ENST00000574054 IQCA1Q86XH1 822 aa24.8■■□□□ 1.56
CHRNB1-206ENST00000574054 VTA1Q9NP79 307 aa24.8■■□□□ 1.56
CHRNB1-206ENST00000574054 ADD3Q9UEY8 706 aaKnown RBP24.8■■□□□ 1.56
CHRNB1-206ENST00000574054 SUPT16HQ9Y5B9 1047 aaKnown RBP24.8■■□□□ 1.56
CHRNB1-206ENST00000574054 LRRC37A2A6NM11 1700 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 GOLGA8HP0CJ92 632 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 SNHG28P0DPA3 235 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 CALML3P27482 149 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 CDK7P50613 346 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 ALDH5A1P51649 535 aaPredicted RBP24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 NKX3-2P78367 333 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 IQSEC1Q6DN90 963 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 TAPT1Q6NXT6 567 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 CXCL17Q6UXB2 119 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 SLC30A10Q6XR72 485 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 KIAA1211Q6ZU35 1233 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 DGKHQ86XP1 1220 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 DSCC1Q9BVC3 393 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 TBX21Q9UL17 535 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 PNMA2Q9UL42 364 aa24.79■■□□□ 1.56
CHRNB1-206ENST00000574054 B4E1Z4 1266 aa24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 TLR3O15455 904 aaKnown RBP24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 ZEB2O60315 1214 aa24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 TIMP1P01033 207 aa24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 IMMTQ16891 758 aaKnown RBP24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 CCDC178Q5BJE1 867 aa24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 GPATCH4Q5T3I0 446 aaKnown RBP24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 PNMA1Q8ND90 353 aa24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 CLEC4DQ8WXI8 215 aa24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 UBA5Q9GZZ9 404 aa24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 KAT14Q9H8E8 782 aa24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 CTNNA3Q9UI47 895 aa24.78■■□□□ 1.56
CHRNB1-206ENST00000574054 USH1GQ495M9 461 aa24.77■■□□□ 1.56
CHRNB1-206ENST00000574054 RNF207Q6ZRF8 634 aa24.77■■□□□ 1.56
CHRNB1-206ENST00000574054 MORC4Q8TE76 937 aa24.77■■□□□ 1.56
CHRNB1-206ENST00000574054 GUCD1Q96NT3 240 aa24.77■■□□□ 1.56
CHRNB1-206ENST00000574054 CPVLQ9H3G5 476 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms