RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 RRP12Q5JTH9 1297 aaKnown RBP14.38□□□□□ -0.11
CCDC40-210ENST00000573903 PSRC1Q6PGN9 363 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-210ENST00000573903 PPP1R12CQ9BZL4 782 aa14.38□□□□□ -0.11
CCDC40-210ENST00000573903 KATNBL1Q9H079 304 aa14.38□□□□□ -0.11
CCDC40-210ENST00000573903 IL17RBQ9NRM6 502 aa14.38□□□□□ -0.11
CCDC40-210ENST00000573903 ADD3Q9UEY8 706 aaKnown RBP14.38□□□□□ -0.11
CCDC40-210ENST00000573903 SUPT16HQ9Y5B9 1047 aaKnown RBP14.38□□□□□ -0.11
CCDC40-210ENST00000573903 SALL3Q9BXA9 1300 aa14.38□□□□□ -0.11
CCDC40-210ENST00000573903 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-210ENST00000573903 FOXP2O15409 715 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 ICAM1P05362 532 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 DNAJB2P25686 324 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 SNAP25P60880 206 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 NKX3-2P78367 333 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 ALX1Q15699 326 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 FSCN1Q16658 493 aaKnown RBP14.37□□□□□ -0.11
CCDC40-210ENST00000573903 MUM1L1Q5H9M0 696 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 VPS53Q5VIR6 699 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 IQSEC1Q6DN90 963 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 FAM126BQ8IXS8 530 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.37□□□□□ -0.11
CCDC40-210ENST00000573903 SEZ6LQ9BYH1 1024 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 MTIF3Q9H2K0 278 aaKnown RBP14.37□□□□□ -0.11
CCDC40-210ENST00000573903 VTA1Q9NP79 307 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 INCENPQ9NQS7 918 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 CYP39A1Q9NYL5 469 aa14.37□□□□□ -0.11
CCDC40-210ENST00000573903 DYNC1LI2O43237 492 aaPredicted RBP14.36□□□□□ -0.11
CCDC40-210ENST00000573903 TOP1P11387 765 aaKnown RBP14.36□□□□□ -0.11
CCDC40-210ENST00000573903 CSF2RAP15509 400 aa14.36□□□□□ -0.11
CCDC40-210ENST00000573903 PDE1AP54750 535 aa14.36□□□□□ -0.11
CCDC40-210ENST00000573903 MCMDC2Q4G0Z9 681 aa14.36□□□□□ -0.11
CCDC40-210ENST00000573903 SYDE2Q5VT97 1194 aa14.36□□□□□ -0.11
CCDC40-210ENST00000573903 CXCL17Q6UXB2 119 aa14.36□□□□□ -0.11
CCDC40-210ENST00000573903 EEPD1Q7L9B9 569 aa14.36□□□□□ -0.11
CCDC40-210ENST00000573903 RASGRP2Q7LDG7 609 aa14.36□□□□□ -0.11
CCDC40-210ENST00000573903 TICAM2Q86XR7 235 aa14.36□□□□□ -0.11
CCDC40-210ENST00000573903 FBXO16Q8IX29 292 aaPredicted RBP14.36□□□□□ -0.11
CCDC40-210ENST00000573903 MPHOSPH6Q99547 160 aaKnown RBP14.36□□□□□ -0.11
CCDC40-210ENST00000573903 COL25A1Q9BXS0 654 aaPredicted RBP14.36□□□□□ -0.11
CCDC40-210ENST00000573903 RANBP17Q9H2T7 1088 aaKnown RBP14.36□□□□□ -0.11
CCDC40-210ENST00000573903 PNMA2Q9UL42 364 aa14.36□□□□□ -0.11
CCDC40-210ENST00000573903 GNEQ9Y223 722 aaKnown RBP14.36□□□□□ -0.11
CCDC40-210ENST00000573903 ZMYM6O95789 1325 aa14.36□□□□□ -0.11
CCDC40-210ENST00000573903 LAMA2P24043 3122 aaKnown RBP14.35□□□□□ -0.11
CCDC40-210ENST00000573903 PTPDC1A2A3K4 754 aa14.35□□□□□ -0.11
CCDC40-210ENST00000573903 TRIM6-TRIM34B2RNG4 842 aa14.35□□□□□ -0.11
CCDC40-210ENST00000573903 CTAGE5O15320 804 aa14.35□□□□□ -0.11
CCDC40-210ENST00000573903 PCP11498 1178 aaKnown RBP14.35□□□□□ -0.11
CCDC40-210ENST00000573903 SMPD1P17405 629 aa14.35□□□□□ -0.11
CCDC40-210ENST00000573903 MFAP1P55081 439 aaKnown RBP14.35□□□□□ -0.11
CCDC40-210ENST00000573903 ITGA7Q13683 1181 aa14.35□□□□□ -0.11
CCDC40-210ENST00000573903 KIAA1211Q6ZU35 1233 aa14.35□□□□□ -0.11
CCDC40-210ENST00000573903 TIFAQ96CG3 184 aa14.35□□□□□ -0.11
CCDC40-210ENST00000573903 HIPK3Q9H422 1215 aa14.35□□□□□ -0.11
CCDC40-210ENST00000573903 Q9Y3F1 56 aa14.35□□□□□ -0.11
CCDC40-210ENST00000573903 ASTN1O14525 1302 aa14.35□□□□□ -0.11
CCDC40-210ENST00000573903 FRMPD2Q68DX3 1309 aaPredicted RBP14.35□□□□□ -0.11
CCDC40-210ENST00000573903 LCTP09848 1927 aa14.35□□□□□ -0.11
CCDC40-210ENST00000573903 LOC102724159A0A0B4J2E5 919 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 A0A0D9SFI3 127 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 CD4P01730 458 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 FGAP02671 866 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 FGRP09769 529 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 SLC16A2P36021 539 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 NOVP48745 357 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 ALDH5A1P51649 535 aaPredicted RBP14.34□□□□□ -0.11
CCDC40-210ENST00000573903 HDAC1Q13547 482 aaPredicted RBP14.34□□□□□ -0.11
CCDC40-210ENST00000573903 PWP2Q15269 919 aaKnown RBP14.34□□□□□ -0.11
CCDC40-210ENST00000573903 TMEM240Q5SV17 173 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 BTNL9Q6UXG8 535 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 FAM227BQ96M60 508 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 TMEM47Q9BQJ4 181 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 RNF41Q9H4P4 317 aaPredicted RBP14.34□□□□□ -0.11
CCDC40-210ENST00000573903 ZNF576Q9H609 170 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 GPCPD1Q9NPB8 672 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 IL23AQ9NPF7 189 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 TCP11L1Q9NUJ3 509 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 CCDC171Q6TFL3 1326 aa14.34□□□□□ -0.11
CCDC40-210ENST00000573903 ACRP10323 421 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 HSPD1P10809 573 aaKnown RBP14.33□□□□□ -0.12
CCDC40-210ENST00000573903 CYP2C18P33260 490 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 HAND2P61296 217 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 NMIQ13287 307 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-210ENST00000573903 BAATQ14032 418 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-210ENST00000573903 BRDTQ58F21 947 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-210ENST00000573903 TTBK2Q6IQ55 1244 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 TAPT1Q6NXT6 567 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 MFSD6Q6ZSS7 791 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 ZNF365Q70YC5 407 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 SLC43A3Q8NBI5 491 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 RILPL2Q969X0 211 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 GAS2L1Q99501 681 aaPredicted RBP14.33□□□□□ -0.12
CCDC40-210ENST00000573903 PDGFCQ9NRA1 345 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 POLR3EQ9NVU0 708 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 MSRAQ9UJ68 235 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 RAD50Q92878 1312 aa14.33□□□□□ -0.12
CCDC40-210ENST00000573903 B4DLN1 442 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 NFIBO00712 420 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 FGBP02675 491 aa14.32□□□□□ -0.12
CCDC40-210ENST00000573903 PDHBP11177 359 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms