RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 GALNT18Q6P9A2 607 aa7.27□□□□□ -1.25
CDC27-215ENST00000573550 CKAP2LQ8IYA6 745 aa7.27□□□□□ -1.25
CDC27-215ENST00000573550 PPP1R14AQ96A00 147 aa7.27□□□□□ -1.25
CDC27-215ENST00000573550 ARMC5Q96C12 935 aa7.27□□□□□ -1.25
CDC27-215ENST00000573550 SLC6A17Q9H1V8 727 aa7.27□□□□□ -1.25
CDC27-215ENST00000573550 CRTAC1Q9NQ79 661 aa7.27□□□□□ -1.25
CDC27-215ENST00000573550 C2orf71A6NGG8 1288 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 NOP56O00567 594 aaKnown RBP7.26□□□□□ -1.25
CDC27-215ENST00000573550 CYP4F3Q08477 520 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 MESP2Q0VG99 397 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 GTF2IRD2BQ6EKJ0 949 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 GTF2IRD2Q86UP8 949 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 IRF2BP1Q8IU81 584 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 SIRT2Q8IXJ6 389 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 COPS5Q92905 334 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 EPN3Q9H201 632 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 NKX2-4Q9H2Z4 354 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 IMPACTQ9P2X3 320 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 ACSL6Q9UKU0 697 aa7.26□□□□□ -1.25
CDC27-215ENST00000573550 CAPNS1P04632 268 aa7.25□□□□□ -1.25
CDC27-215ENST00000573550 GTF2F1P35269 517 aaKnown RBP eCLIP7.25□□□□□ -1.25
CDC27-215ENST00000573550 TXKP42681 527 aa7.25□□□□□ -1.25
CDC27-215ENST00000573550 SEPHS1P49903 392 aa7.25□□□□□ -1.25
CDC27-215ENST00000573550 SCRN1Q12765 414 aa7.25□□□□□ -1.25
CDC27-215ENST00000573550 NBPF6Q5VWK0 638 aa7.25□□□□□ -1.25
CDC27-215ENST00000573550 NBPF4Q96M43 638 aa7.25□□□□□ -1.25
CDC27-215ENST00000573550 DIRC2Q96SL1 478 aa7.25□□□□□ -1.25
CDC27-215ENST00000573550 PCGF6Q9BYE7 350 aa7.25□□□□□ -1.25
CDC27-215ENST00000573550 TRIM55Q9BYV6 548 aa7.25□□□□□ -1.25
CDC27-215ENST00000573550 NSUN3Q9H649 340 aaKnown RBP7.25□□□□□ -1.25
CDC27-215ENST00000573550 MSRB2Q9Y3D2 182 aa7.25□□□□□ -1.25
CDC27-215ENST00000573550 TBC1D8O95759 1140 aa7.24□□□□□ -1.25
CDC27-215ENST00000573550 PNLIPP16233 465 aa7.24□□□□□ -1.25
CDC27-215ENST00000573550 PRKCAP17252 672 aa7.24□□□□□ -1.25
CDC27-215ENST00000573550 KSR1Q8IVT5 923 aa7.24□□□□□ -1.25
CDC27-215ENST00000573550 NUP43Q8NFH3 380 aa7.24□□□□□ -1.25
CDC27-215ENST00000573550 BTN2A2Q8WVV5 523 aa7.24□□□□□ -1.25
CDC27-215ENST00000573550 CYP26B1Q9NR63 512 aa7.24□□□□□ -1.25
CDC27-215ENST00000573550 SMARCA2P51531 1590 aa7.24□□□□□ -1.25
CDC27-215ENST00000573550 MSL3P1P0C860 447 aa7.23□□□□□ -1.25
CDC27-215ENST00000573550 ZEB1P37275 1124 aaPredicted RBP7.23□□□□□ -1.25
CDC27-215ENST00000573550 ERVFRD-1P60508 538 aa7.23□□□□□ -1.25
CDC27-215ENST00000573550 MVKQ03426 396 aa7.23□□□□□ -1.25
CDC27-215ENST00000573550 RBL2Q08999 1139 aa7.23□□□□□ -1.25
CDC27-215ENST00000573550 SF3A1Q15459 793 aaKnown RBP7.23□□□□□ -1.25
CDC27-215ENST00000573550 ADGRF1Q5T601 910 aa7.23□□□□□ -1.25
CDC27-215ENST00000573550 ZNF648Q5T619 568 aaPredicted RBP7.23□□□□□ -1.25
CDC27-215ENST00000573550 JAMLQ86YT9 394 aa7.23□□□□□ -1.25
CDC27-215ENST00000573550 EPB41L4BQ9H329 900 aa7.23□□□□□ -1.25
CDC27-215ENST00000573550 KCNK12Q9HB15 430 aa7.23□□□□□ -1.25
CDC27-215ENST00000573550 TNFRSF12AQ9NP84 129 aa7.23□□□□□ -1.25
CDC27-215ENST00000573550 LRP2BPQ9P2M1 347 aa7.23□□□□□ -1.25
CDC27-215ENST00000573550 EEA1Q15075 1411 aa7.22□□□□□ -1.25
CDC27-215ENST00000573550 FARP2O94887 1054 aaPredicted RBP7.22□□□□□ -1.25
CDC27-215ENST00000573550 THBDP07204 575 aa7.22□□□□□ -1.25
CDC27-215ENST00000573550 PAMP19021 973 aa7.22□□□□□ -1.25
CDC27-215ENST00000573550 L1CAMP32004 1257 aa7.22□□□□□ -1.25
CDC27-215ENST00000573550 CORO7P57737 925 aa7.22□□□□□ -1.25
CDC27-215ENST00000573550 SERINC3Q13530 473 aa7.22□□□□□ -1.25
CDC27-215ENST00000573550 LAPTM5Q13571 262 aa7.22□□□□□ -1.25
CDC27-215ENST00000573550 ST13P5Q8NFI4 369 aaPredicted RBP7.22□□□□□ -1.25
CDC27-215ENST00000573550 NPLOC4Q8TAT6 608 aa7.22□□□□□ -1.25
CDC27-215ENST00000573550 HIRIP3Q9BW71 556 aaPredicted RBP7.22□□□□□ -1.25
CDC27-215ENST00000573550 KRTAP9-2Q9BYQ4 174 aa7.22□□□□□ -1.25
CDC27-215ENST00000573550 DCP1AQ9NPI6 582 aaPredicted RBP7.22□□□□□ -1.25
CDC27-215ENST00000573550 GPRC5CQ9NQ84 441 aa7.22□□□□□ -1.25
CDC27-215ENST00000573550 NPHP3-ACAD11A0A0J9YXS1 232 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 A0A1W2PQU0 124 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 SCG5P05408 212 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 PLS3P13797 630 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 SDHBP21912 280 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 PDE6BP35913 854 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 PPP2R2AP63151 447 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 CYP4F8P98187 520 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 SF1Q15637 639 aaKnown RBP7.21□□□□□ -1.26
CDC27-215ENST00000573550 MBLAC2Q68D91 279 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 CPNE8Q86YQ8 564 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 FBXO15Q8NCQ5 510 aaPredicted RBP7.21□□□□□ -1.26
CDC27-215ENST00000573550 NLGN2Q8NFZ4 835 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 FRS2Q8WU20 508 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 SREK1Q8WXA9 508 aaKnown RBP7.21□□□□□ -1.26
CDC27-215ENST00000573550 FAM84AQ96KN4 292 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 CLEC1BQ9P126 229 aa7.21□□□□□ -1.26
CDC27-215ENST00000573550 PPP1R1BQ9UD71 204 aaPredicted RBP7.21□□□□□ -1.26
CDC27-215ENST00000573550 TRBV23OR9-2A0A075B6M9 112 aa7.2□□□□□ -1.26
CDC27-215ENST00000573550 OR14I1A6ND48 311 aa7.2□□□□□ -1.26
CDC27-215ENST00000573550 U2SURPO15042 1029 aaKnown RBP7.2□□□□□ -1.26
CDC27-215ENST00000573550 HOXC12P31275 282 aa7.2□□□□□ -1.26
CDC27-215ENST00000573550 GRIA2P42262 883 aa7.2□□□□□ -1.26
CDC27-215ENST00000573550 GFRA1P56159 465 aa7.2□□□□□ -1.26
CDC27-215ENST00000573550 ZNF605Q86T29 641 aa7.2□□□□□ -1.26
CDC27-215ENST00000573550 MMP19Q99542 508 aa7.2□□□□□ -1.26
CDC27-215ENST00000573550 KRTAP4-12Q9BQ66 201 aa7.2□□□□□ -1.26
CDC27-215ENST00000573550 ZNF552Q9H707 407 aaPredicted RBP7.2□□□□□ -1.26
CDC27-215ENST00000573550 SIRPGQ9P1W8 387 aa7.2□□□□□ -1.26
CDC27-215ENST00000573550 WRNQ14191 1432 aaPredicted RBP eCLIP7.19□□□□□ -1.26
CDC27-215ENST00000573550 MYOCOSA0A1B0GUC4 107 aa7.19□□□□□ -1.26
CDC27-215ENST00000573550 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
CDC27-215ENST00000573550 AGRPO00253 132 aa7.19□□□□□ -1.26
CDC27-215ENST00000573550 C8AP07357 584 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms