RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 QRICH1Q2TAL8 776 aa24.07■■□□□ 1.44
CHMP6-204ENST00000572778 ADCK5Q3MIX3 580 aa24.07■■□□□ 1.44
CHMP6-204ENST00000572778 MAMDC4Q6UXC1 1216 aa24.07■■□□□ 1.44
CHMP6-204ENST00000572778 UBE2Q1Q7Z7E8 422 aa24.07■■□□□ 1.44
CHMP6-204ENST00000572778 PAWRQ96IZ0 340 aaKnown RBP24.07■■□□□ 1.44
CHMP6-204ENST00000572778 FGD4Q96M96 766 aa24.07■■□□□ 1.44
CHMP6-204ENST00000572778 MYL10Q9BUA6 226 aa24.07■■□□□ 1.44
CHMP6-204ENST00000572778 SYNGAP1Q96PV0 1343 aa24.07■■□□□ 1.44
CHMP6-204ENST00000572778 SOWAHBA6NEL2 793 aa24.06■■□□□ 1.44
CHMP6-204ENST00000572778 BAATQ14032 418 aaPredicted RBP24.06■■□□□ 1.44
CHMP6-204ENST00000572778 FBXO11Q86XK2 927 aa24.06■■□□□ 1.44
CHMP6-204ENST00000572778 DIS3LQ8TF46 1054 aaKnown RBP24.06■■□□□ 1.44
CHMP6-204ENST00000572778 CLEC4DQ8WXI8 215 aa24.06■■□□□ 1.44
CHMP6-204ENST00000572778 DDAH1O94760 285 aa24.05■■□□□ 1.44
CHMP6-204ENST00000572778 SNAI1O95863 264 aaPredicted RBP24.05■■□□□ 1.44
CHMP6-204ENST00000572778 HSPA4P34932 840 aa24.05■■□□□ 1.44
CHMP6-204ENST00000572778 LIFRP42702 1097 aa24.05■■□□□ 1.44
CHMP6-204ENST00000572778 NECAB2Q7Z6G3 386 aa24.05■■□□□ 1.44
CHMP6-204ENST00000572778 CTCFLQ8NI51 663 aaPredicted RBP24.05■■□□□ 1.44
CHMP6-204ENST00000572778 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.05■■□□□ 1.44
CHMP6-204ENST00000572778 ZHX1Q9UKY1 873 aaPredicted RBP24.05■■□□□ 1.44
CHMP6-204ENST00000572778 ZNF865P0CJ78 1059 aaPredicted RBP24.04■■□□□ 1.44
CHMP6-204ENST00000572778 CALML3P27482 149 aa24.04■■□□□ 1.44
CHMP6-204ENST00000572778 RNF207Q6ZRF8 634 aa24.04■■□□□ 1.44
CHMP6-204ENST00000572778 ARMCX2Q7L311 632 aa24.04■■□□□ 1.44
CHMP6-204ENST00000572778 DHX32Q7L7V1 743 aaKnown RBP24.04■■□□□ 1.44
CHMP6-204ENST00000572778 HOMER1Q86YM7 354 aa24.04■■□□□ 1.44
CHMP6-204ENST00000572778 CCDC144CPQ8IYA2 1237 aa24.04■■□□□ 1.44
CHMP6-204ENST00000572778 TCEANC2Q96MN5 208 aa24.04■■□□□ 1.44
CHMP6-204ENST00000572778 PURBQ96QR8 312 aaKnown RBP24.04■■□□□ 1.44
CHMP6-204ENST00000572778 SNX14Q9Y5W7 946 aa24.04■■□□□ 1.44
CHMP6-204ENST00000572778 ABCB11O95342 1321 aa24.04■■□□□ 1.44
CHMP6-204ENST00000572778 ASB14A6NK59 587 aa24.03■■□□□ 1.44
CHMP6-204ENST00000572778 KIF5BP33176 963 aa24.03■■□□□ 1.44
CHMP6-204ENST00000572778 EXOSC10Q01780 885 aaKnown RBP24.03■■□□□ 1.44
CHMP6-204ENST00000572778 KCNB2Q92953 911 aa24.03■■□□□ 1.44
CHMP6-204ENST00000572778 MAP3K14Q99558 947 aa24.03■■□□□ 1.44
CHMP6-204ENST00000572778 HTATIP2Q9BUP3 242 aa24.03■■□□□ 1.44
CHMP6-204ENST00000572778 SLC12A7Q9Y666 1083 aa24.03■■□□□ 1.44
CHMP6-204ENST00000572778 ZNFX1Q9P2E3 1918 aaKnown RBP24.02■■□□□ 1.44
CHMP6-204ENST00000572778 ZBTB5O15062 677 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 MYCNP04198 464 aaPredicted RBP24.02■■□□□ 1.44
CHMP6-204ENST00000572778 HMGB1P09429 215 aaKnown RBP24.02■■□□□ 1.44
CHMP6-204ENST00000572778 RXRAP19793 462 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 MNX1P50219 401 aaPredicted RBP24.02■■□□□ 1.44
CHMP6-204ENST00000572778 ACVR2BQ13705 512 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 SLC30A10Q6XR72 485 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 RAB11FIP4Q86YS3 637 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 DPF3Q92784 378 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 MTMR8Q96EF0 704 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 JAKMIP1Q96N16 626 aaKnown RBP24.02■■□□□ 1.44
CHMP6-204ENST00000572778 PIGSQ96S52 555 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 AMNQ9BXJ7 453 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 ABHD16BQ9H3Z7 469 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 C11orf49Q9H6J7 331 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 RIOX1Q9H6W3 641 aa24.02■■□□□ 1.44
CHMP6-204ENST00000572778 ADD3Q9UEY8 706 aaKnown RBP24.02■■□□□ 1.44
CHMP6-204ENST00000572778 MRPL11Q9Y3B7 192 aaKnown RBP24.02■■□□□ 1.44
CHMP6-204ENST00000572778 CALM1P0DP23 149 aa24.01■■□□□ 1.43
CHMP6-204ENST00000572778 CALM2P0DP24 149 aa24.01■■□□□ 1.43
CHMP6-204ENST00000572778 CALM3P0DP25 149 aa24.01■■□□□ 1.43
CHMP6-204ENST00000572778 RARBP10826 455 aa24.01■■□□□ 1.43
CHMP6-204ENST00000572778 AKR1A1P14550 325 aa24.01■■□□□ 1.43
CHMP6-204ENST00000572778 RPS6P62753 249 aaKnown RBP24.01■■□□□ 1.43
CHMP6-204ENST00000572778 SLC35G1Q2M3R5 365 aa24.01■■□□□ 1.43
CHMP6-204ENST00000572778 SYNE3Q6ZMZ3 975 aa24.01■■□□□ 1.43
CHMP6-204ENST00000572778 PIBF1Q8WXW3 757 aa24.01■■□□□ 1.43
CHMP6-204ENST00000572778 FAM184BQ9ULE4 1060 aa24.01■■□□□ 1.43
CHMP6-204ENST00000572778 EPB41L2O43491 1005 aaKnown RBP24■■□□□ 1.43
CHMP6-204ENST00000572778 CYTH3O43739 400 aa24■■□□□ 1.43
CHMP6-204ENST00000572778 CPA1P15085 419 aa24■■□□□ 1.43
CHMP6-204ENST00000572778 FGD1P98174 961 aa24■■□□□ 1.43
CHMP6-204ENST00000572778 ARRDC4Q8NCT1 418 aa24■■□□□ 1.43
CHMP6-204ENST00000572778 DDX49Q9Y6V7 483 aaKnown RBP24■■□□□ 1.43
CHMP6-204ENST00000572778 ASTN1O14525 1302 aa24■■□□□ 1.43
CHMP6-204ENST00000572778 PLXNA1Q9UIW2 1896 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 GNAQP50148 359 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 GJC2Q5T442 439 aaPredicted RBP23.99■■□□□ 1.43
CHMP6-204ENST00000572778 BLOC1S2Q6QNY1 142 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 SGMS1Q86VZ5 419 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 MICU3Q86XE3 530 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 MCF2L2Q86YR7 1114 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 RGS22Q8NE09 1264 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 TBC1D5Q92609 795 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 LZTS2Q9BRK4 669 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 USP26Q9BXU7 913 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 XPNPEP3Q9NQH7 507 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 PCDHA1Q9Y5I3 950 aa23.99■■□□□ 1.43
CHMP6-204ENST00000572778 PPP1R11O60927 126 aaPredicted RBP23.98■■□□□ 1.43
CHMP6-204ENST00000572778 PSMA5P28066 241 aa23.98■■□□□ 1.43
CHMP6-204ENST00000572778 ALDH5A1P51649 535 aaPredicted RBP23.98■■□□□ 1.43
CHMP6-204ENST00000572778 LENG1Q96BZ8 264 aaPredicted RBP23.98■■□□□ 1.43
CHMP6-204ENST00000572778 MKI67P46013 3256 aaKnown RBP23.97■■□□□ 1.43
CHMP6-204ENST00000572778 PNMA6FA0A0J9YX94 578 aa23.97■■□□□ 1.43
CHMP6-204ENST00000572778 DNM1LO00429 736 aa23.97■■□□□ 1.43
CHMP6-204ENST00000572778 PLEKHA8P1O95397 391 aa23.97■■□□□ 1.43
CHMP6-204ENST00000572778 TRAF1Q13077 416 aa23.97■■□□□ 1.43
CHMP6-204ENST00000572778 CCDC144BQ3MJ40 725 aa23.97■■□□□ 1.43
CHMP6-204ENST00000572778 EEPD1Q7L9B9 569 aa23.97■■□□□ 1.43
CHMP6-204ENST00000572778 CMTR1Q8N1G2 835 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms