RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 AKR1A1P14550 325 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 AK2P54819 239 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 TFAP4Q01664 338 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 PLS1Q14651 629 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 TMEM179Q6ZVK1 233 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 ZNF444Q8N0Y2 327 aaPredicted RBP16.06■□□□□ 0.16
RPAIN-209ENST00000571558 USP38Q8NB14 1042 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 TINF2Q9BSI4 451 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 LRRC2Q9BYS8 371 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 GPHNQ9NQX3 736 aaPredicted RBP16.06■□□□□ 0.16
RPAIN-209ENST00000571558 TCP11L1Q9NUJ3 509 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 MROH7Q68CQ1 1323 aa16.06■□□□□ 0.16
RPAIN-209ENST00000571558 IGKV6D-41A0A0C4DH26 115 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 MOXD2PA6NHM9 499 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 SH2B2O14492 632 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-209ENST00000571558 FLOT1O75955 427 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 TIMP1P01033 207 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 AKR1B1P15121 316 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 COPB2P35606 906 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 NOVP48745 357 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 FAAP100Q0VG06 881 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 SEC23AQ15436 765 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 Q6ZUG5 572 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 MSL3Q8N5Y2 521 aaKnown RBP16.05■□□□□ 0.16
RPAIN-209ENST00000571558 NEDD1Q8NHV4 660 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 TMEM87BQ96K49 555 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 CCDC17Q96LX7 622 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 ASB2Q96Q27 587 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 LY9Q9HBG7 655 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 IL17RBQ9NRM6 502 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 THEGQ9P2T0 379 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 A0A0G2JMZ2 1700 aa16.05■□□□□ 0.16
RPAIN-209ENST00000571558 TSPY2A6NKD2 308 aa16.04■□□□□ 0.16
RPAIN-209ENST00000571558 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
RPAIN-209ENST00000571558 NMT2O60551 498 aa16.04■□□□□ 0.16
RPAIN-209ENST00000571558 EVCP57679 992 aa16.04■□□□□ 0.16
RPAIN-209ENST00000571558 KCTD2Q14681 263 aa16.04■□□□□ 0.16
RPAIN-209ENST00000571558 MFSD5Q6N075 450 aa16.04■□□□□ 0.16
RPAIN-209ENST00000571558 ENAHQ8N8S7 591 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-209ENST00000571558 ZSCAN10Q96SZ4 725 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-209ENST00000571558 ZKSCAN3Q9BRR0 538 aa16.04■□□□□ 0.16
RPAIN-209ENST00000571558 ARHGEF10LQ9HCE6 1279 aa16.04■□□□□ 0.16
RPAIN-209ENST00000571558 ADAMTS5Q9UNA0 930 aa16.04■□□□□ 0.16
RPAIN-209ENST00000571558 CNPY2Q9Y2B0 182 aa16.04■□□□□ 0.16
RPAIN-209ENST00000571558 TMX2Q9Y320 296 aa16.04■□□□□ 0.16
RPAIN-209ENST00000571558 GREB1LQ9C091 1923 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-209ENST00000571558 IFIT3O14879 490 aaKnown RBP16.03■□□□□ 0.16
RPAIN-209ENST00000571558 WDR46O15213 610 aaKnown RBP16.03■□□□□ 0.16
RPAIN-209ENST00000571558 ADAMTS4O75173 837 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 PGK1P00558 417 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 TSPY3P0CV98 308 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 TSPY8P0CW00 308 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 LIFRP42702 1097 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 ACLYP53396 1101 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 MRPS5P82675 430 aaKnown RBP16.03■□□□□ 0.16
RPAIN-209ENST00000571558 PPIGQ13427 754 aaKnown RBP eCLIP16.03■□□□□ 0.162e-8■■■□□ 15.8
RPAIN-209ENST00000571558 ZNF792Q3KQV3 632 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 RCSD1Q6JBY9 416 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 RIOX2Q8IUF8 465 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 ANKS1AQ92625 1134 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 BRF1Q92994 677 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 MMP19Q99542 508 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 SENP2Q9HC62 589 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 STARD7Q9NQZ5 370 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 ELP1O95163 1332 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 TNKSO95271 1327 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 NCOR1O75376 2440 aa16.03■□□□□ 0.16
RPAIN-209ENST00000571558 ZNF865P0CJ78 1059 aaPredicted RBP16.02■□□□□ 0.16
RPAIN-209ENST00000571558 ANP32AP39687 249 aaKnown RBP16.02■□□□□ 0.16
RPAIN-209ENST00000571558 PLA2G5P39877 138 aa16.02■□□□□ 0.16
RPAIN-209ENST00000571558 MCM2P49736 904 aa16.02■□□□□ 0.16
RPAIN-209ENST00000571558 ANKRD1Q15327 319 aa16.02■□□□□ 0.16
RPAIN-209ENST00000571558 TMEM67Q5HYA8 995 aa16.02■□□□□ 0.16
RPAIN-209ENST00000571558 RASIP1Q5U651 963 aa16.02■□□□□ 0.16
RPAIN-209ENST00000571558 SGMS1Q86VZ5 419 aa16.02■□□□□ 0.16
RPAIN-209ENST00000571558 IQCA1Q86XH1 822 aa16.02■□□□□ 0.16
RPAIN-209ENST00000571558 ATG4CQ96DT6 458 aa16.02■□□□□ 0.16
RPAIN-209ENST00000571558 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.02■□□□□ 0.163e-12■■□□□ 13.8
RPAIN-209ENST00000571558 UBAC1Q9BSL1 405 aa16.02■□□□□ 0.16
RPAIN-209ENST00000571558 VCPKMTQ9H867 229 aa16.02■□□□□ 0.16
RPAIN-209ENST00000571558 TBX21Q9UL17 535 aa16.02■□□□□ 0.16
RPAIN-209ENST00000571558 TMEM132BQ14DG7 1078 aa16.02■□□□□ 0.15
RPAIN-209ENST00000571558 SART3Q15020 963 aaKnown RBP16.02■□□□□ 0.15
RPAIN-209ENST00000571558 ADAMTS19Q8TE59 1207 aa16.02■□□□□ 0.15
RPAIN-209ENST00000571558 GLT1D1Q96MS3 346 aa16.02■□□□□ 0.15
RPAIN-209ENST00000571558 PBX4Q9BYU1 374 aa16.02■□□□□ 0.15
RPAIN-209ENST00000571558 BRPF3Q9ULD4 1205 aa16.02■□□□□ 0.15
RPAIN-209ENST00000571558 TPCN1Q9ULQ1 816 aa16.02■□□□□ 0.15
RPAIN-209ENST00000571558 LIMCH1Q9UPQ0 1083 aa16.02■□□□□ 0.15
RPAIN-209ENST00000571558 CHD9Q3L8U1 2897 aa16.01■□□□□ 0.15
RPAIN-209ENST00000571558 APOBRQ0VD83 1088 aa16.01■□□□□ 0.15
RPAIN-209ENST00000571558 CCDC178Q5BJE1 867 aa16.01■□□□□ 0.15
RPAIN-209ENST00000571558 PSRC1Q6PGN9 363 aaPredicted RBP16.01■□□□□ 0.15
RPAIN-209ENST00000571558 DGKHQ86XP1 1220 aa16.01■□□□□ 0.15
RPAIN-209ENST00000571558 TMEM199Q8N511 208 aa16.01■□□□□ 0.15
RPAIN-209ENST00000571558 PCSK9Q8NBP7 692 aaKnown RBP16.01■□□□□ 0.15
RPAIN-209ENST00000571558 KLHDC9Q8NEP7 349 aa16.01■□□□□ 0.15
RPAIN-209ENST00000571558 CEP95Q96GE4 821 aa16.01■□□□□ 0.15
RPAIN-209ENST00000571558 LARP6Q9BRS8 491 aaKnown RBP16.01■□□□□ 0.15
RPAIN-209ENST00000571558 MTMR4Q9NYA4 1195 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms