RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 SH3RF1Q7Z6J0 888 aa16.15■□□□□ 0.18
RAB40B-204ENST00000571554 TDHQ8IZJ6 230 aa16.15■□□□□ 0.18
RAB40B-204ENST00000571554 TTC14Q96N46 770 aa16.15■□□□□ 0.18
RAB40B-204ENST00000571554 LBHD1Q9BQE6 289 aaPredicted RBP16.15■□□□□ 0.18
RAB40B-204ENST00000571554 UBA5Q9GZZ9 404 aa16.15■□□□□ 0.18
RAB40B-204ENST00000571554 KATNBL1Q9H079 304 aa16.15■□□□□ 0.18
RAB40B-204ENST00000571554 PTPDC1A2A3K4 754 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 PQBP1O60828 265 aaKnown RBP16.14■□□□□ 0.17
RAB40B-204ENST00000571554 C6orf222P0C671 652 aaPredicted RBP16.14■□□□□ 0.17
RAB40B-204ENST00000571554 ACLYP53396 1101 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 TLE2Q04725 743 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 BAATQ14032 418 aaPredicted RBP16.14■□□□□ 0.17
RAB40B-204ENST00000571554 KCNA10Q16322 511 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 SLC30A10Q6XR72 485 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.17
RAB40B-204ENST00000571554 IQCA1Q86XH1 822 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 FBXO16Q8IX29 292 aaPredicted RBP16.14■□□□□ 0.17
RAB40B-204ENST00000571554 PNMA1Q8ND90 353 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 ZSCAN10Q96SZ4 725 aaPredicted RBP16.14■□□□□ 0.17
RAB40B-204ENST00000571554 KAT14Q9H8E8 782 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 PDLIM7Q9NR12 457 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 ZSWIM5Q9P217 1185 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 CTNNA3Q9UI47 895 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 TNKSO95271 1327 aa16.14■□□□□ 0.17
RAB40B-204ENST00000571554 TRIM43BA6NCK2 446 aa16.13■□□□□ 0.17
RAB40B-204ENST00000571554 DUSP11O75319 330 aaKnown RBP16.13■□□□□ 0.17
RAB40B-204ENST00000571554 SNHG28P0DPA3 235 aa16.13■□□□□ 0.17
RAB40B-204ENST00000571554 CHMLP26374 656 aa16.13■□□□□ 0.17
RAB40B-204ENST00000571554 BEX3Q00994 111 aa16.13■□□□□ 0.17
RAB40B-204ENST00000571554 PTH1RQ03431 593 aa16.13■□□□□ 0.17
RAB40B-204ENST00000571554 USH1GQ495M9 461 aa16.13■□□□□ 0.17
RAB40B-204ENST00000571554 TMEM63BQ5T3F8 832 aa16.13■□□□□ 0.17
RAB40B-204ENST00000571554 DGKHQ86XP1 1220 aa16.13■□□□□ 0.17
RAB40B-204ENST00000571554 ENAHQ8N8S7 591 aaPredicted RBP16.13■□□□□ 0.17
RAB40B-204ENST00000571554 KLHDC9Q8NEP7 349 aa16.13■□□□□ 0.17
RAB40B-204ENST00000571554 TRIM43Q96BQ3 446 aaPredicted RBP16.13■□□□□ 0.17
RAB40B-204ENST00000571554 STARD7Q9NQZ5 370 aa16.13■□□□□ 0.17
RAB40B-204ENST00000571554 PDGFCQ9NRA1 345 aa16.13■□□□□ 0.17
RAB40B-204ENST00000571554 ASB14A6NK59 587 aa16.12■□□□□ 0.17
RAB40B-204ENST00000571554 CALML3P27482 149 aa16.12■□□□□ 0.17
RAB40B-204ENST00000571554 TNFAIP2Q03169 654 aa16.12■□□□□ 0.17
RAB40B-204ENST00000571554 CYB5R4Q7L1T6 521 aa16.12■□□□□ 0.17
RAB40B-204ENST00000571554 SKAP1Q86WV1 359 aa16.12■□□□□ 0.17
RAB40B-204ENST00000571554 CLEC4DQ8WXI8 215 aa16.12■□□□□ 0.17
RAB40B-204ENST00000571554 BADQ92934 168 aa16.12■□□□□ 0.17
RAB40B-204ENST00000571554 KRT23Q9C075 422 aa16.12■□□□□ 0.17
RAB40B-204ENST00000571554 TAF6LQ9Y6J9 622 aa16.12■□□□□ 0.17
RAB40B-204ENST00000571554 ASGR1P07306 291 aa16.11■□□□□ 0.17
RAB40B-204ENST00000571554 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
RAB40B-204ENST00000571554 VTI1AQ96AJ9 217 aa16.11■□□□□ 0.17
RAB40B-204ENST00000571554 UBAC1Q9BSL1 405 aa16.11■□□□□ 0.17
RAB40B-204ENST00000571554 TSEN34Q9BSV6 310 aaKnown RBP16.11■□□□□ 0.17
RAB40B-204ENST00000571554 SPC25Q9HBM1 224 aa16.11■□□□□ 0.17
RAB40B-204ENST00000571554 RAD50Q92878 1312 aa16.11■□□□□ 0.17
RAB40B-204ENST00000571554 MYH6P13533 1939 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 DHX16O60231 1041 aaKnown RBP16.1■□□□□ 0.17
RAB40B-204ENST00000571554 CLTBP09497 229 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 SMPD1P17405 629 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 ITGB8P26012 769 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 ALDH5A1P51649 535 aaPredicted RBP16.1■□□□□ 0.17
RAB40B-204ENST00000571554 GJA9P57773 515 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 CDC37Q16543 378 aaPredicted RBP16.1■□□□□ 0.17
RAB40B-204ENST00000571554 GNASQ5JWF2 1037 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 GPATCH4Q5T3I0 446 aaKnown RBP16.1■□□□□ 0.17
RAB40B-204ENST00000571554 C1orf53Q5VUE5 145 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 RNF207Q6ZRF8 634 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 Q7L0L9 218 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 UPF3AQ9H1J1 476 aaKnown RBP16.1■□□□□ 0.17
RAB40B-204ENST00000571554 CNNM2Q9H8M5 875 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 VAT1LQ9HCJ6 419 aa16.1■□□□□ 0.17
RAB40B-204ENST00000571554 MOXD2PA6NHM9 499 aa16.09■□□□□ 0.17
RAB40B-204ENST00000571554 CTAGE5O15320 804 aa16.09■□□□□ 0.17
RAB40B-204ENST00000571554 DYNC1LI2O43237 492 aaPredicted RBP16.09■□□□□ 0.17
RAB40B-204ENST00000571554 CYP21A2P08686 494 aa16.09■□□□□ 0.17
RAB40B-204ENST00000571554 CST5P28325 142 aaPredicted RBP16.09■□□□□ 0.17
RAB40B-204ENST00000571554 CCDC178Q5BJE1 867 aa16.09■□□□□ 0.17
RAB40B-204ENST00000571554 IFIT1BQ5T764 474 aaKnown RBP16.09■□□□□ 0.17
RAB40B-204ENST00000571554 TAPT1Q6NXT6 567 aa16.09■□□□□ 0.17
RAB40B-204ENST00000571554 TLK2Q86UE8 772 aa16.09■□□□□ 0.17
RAB40B-204ENST00000571554 ADGRF4Q8IZF3 695 aa16.09■□□□□ 0.17
RAB40B-204ENST00000571554 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
RAB40B-204ENST00000571554 ANKS1AQ92625 1134 aa16.09■□□□□ 0.17
RAB40B-204ENST00000571554 GLT1D1Q96MS3 346 aa16.09■□□□□ 0.17
RAB40B-204ENST00000571554 SGSM2O43147 1006 aa16.08■□□□□ 0.16
RAB40B-204ENST00000571554 PARP1P09874 1014 aaKnown RBP16.08■□□□□ 0.16
RAB40B-204ENST00000571554 RPS6P62753 249 aaKnown RBP16.08■□□□□ 0.16
RAB40B-204ENST00000571554 LRIT3Q3SXY7 679 aa16.08■□□□□ 0.16
RAB40B-204ENST00000571554 ASPRV1Q53RT3 343 aa16.08■□□□□ 0.16
RAB40B-204ENST00000571554 C9orf50Q5SZB4 431 aa16.08■□□□□ 0.16
RAB40B-204ENST00000571554 KIAA1211Q6ZU35 1233 aa16.08■□□□□ 0.16
RAB40B-204ENST00000571554 CHST3Q7LGC8 479 aa16.08■□□□□ 0.16
RAB40B-204ENST00000571554 STAG2Q8N3U4 1231 aa16.08■□□□□ 0.16
RAB40B-204ENST00000571554 PCSK9Q8NBP7 692 aaKnown RBP16.08■□□□□ 0.16
RAB40B-204ENST00000571554 TBC1D5Q92609 795 aa16.08■□□□□ 0.16
RAB40B-204ENST00000571554 SENP2Q9HC62 589 aa16.08■□□□□ 0.16
RAB40B-204ENST00000571554 TMEM39AQ9NV64 488 aa16.08■□□□□ 0.16
RAB40B-204ENST00000571554 ADD3Q9UEY8 706 aaKnown RBP16.08■□□□□ 0.16
RAB40B-204ENST00000571554 GNEQ9Y223 722 aaKnown RBP16.08■□□□□ 0.16
RAB40B-204ENST00000571554 WDR19Q8NEZ3 1342 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms