RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TOP1P11387 765 aaKnown RBP14.57□□□□□ -0.08
CTDNEP1-205ENST00000570828 TAL1P17542 331 aaPredicted RBP14.57□□□□□ -0.08
CTDNEP1-205ENST00000570828 NOVP48745 357 aa14.57□□□□□ -0.08
CTDNEP1-205ENST00000570828 GDF15Q99988 308 aa14.57□□□□□ -0.08
CTDNEP1-205ENST00000570828 XPNPEP3Q9NQH7 507 aa14.57□□□□□ -0.08
CTDNEP1-205ENST00000570828 RNF146Q9NTX7 359 aa14.57□□□□□ -0.08
CTDNEP1-205ENST00000570828 TCP11L1Q9NUJ3 509 aa14.57□□□□□ -0.08
CTDNEP1-205ENST00000570828 ZNF213O14771 459 aa14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 ZNF865P0CJ78 1059 aaPredicted RBP14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 MAGEA10P43363 369 aaPredicted RBP14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 IRX6P78412 446 aaPredicted RBP14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 LRRC41Q15345 812 aa14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 TKFCQ3LXA3 575 aa14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 CCDC174Q6PII3 467 aa14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 MAMDC4Q6UXC1 1216 aa14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 RNF180Q86T96 592 aa14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 ESR2Q92731 530 aa14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 AGBL1Q96MI9 1066 aa14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 TMEM47Q9BQJ4 181 aa14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 ZHX1Q9UKY1 873 aaPredicted RBP14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 PRR12Q9ULL5 1215 aa14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 ALPK3Q96L96 1907 aa14.56□□□□□ -0.08
CTDNEP1-205ENST00000570828 FRMPD3Q5JV73 1810 aa14.55□□□□□ -0.08
CTDNEP1-205ENST00000570828 ALAS1P13196 640 aa14.55□□□□□ -0.08
CTDNEP1-205ENST00000570828 BMP8BP34820 402 aa14.55□□□□□ -0.08
CTDNEP1-205ENST00000570828 RTP1P59025 263 aa14.55□□□□□ -0.08
CTDNEP1-205ENST00000570828 PRKAG2Q9UGJ0 569 aa14.55□□□□□ -0.08
CTDNEP1-205ENST00000570828 CCPG1Q9ULG6 757 aa14.55□□□□□ -0.08
CTDNEP1-205ENST00000570828 ATP11BQ9Y2G3 1177 aa14.55□□□□□ -0.08
CTDNEP1-205ENST00000570828 ZNF536O15090 1300 aa14.55□□□□□ -0.08
CTDNEP1-205ENST00000570828 NEDD4P46934 1319 aa14.55□□□□□ -0.08
CTDNEP1-205ENST00000570828 SNAI1O95863 264 aaPredicted RBP14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 PGK1P00558 417 aa14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 ADCYAP1R1P41586 468 aa14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 NT5C2P49902 561 aa14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 SNAP25P60880 206 aa14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 LENG1Q96BZ8 264 aaPredicted RBP14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 TTC14Q96N46 770 aa14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 TRERF1Q96PN7 1200 aa14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 DSCC1Q9BVC3 393 aa14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 A1CFQ9NQ94 594 aaKnown RBP14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 FAM184BQ9ULE4 1060 aa14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 FRMPD2Q68DX3 1309 aaPredicted RBP14.54□□□□□ -0.08
CTDNEP1-205ENST00000570828 ICAM1P05362 532 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 PDE4AP27815 886 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 SLC16A2P36021 539 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 IMMTQ16891 758 aaKnown RBP14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 TTC22Q5TAA0 569 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 SYDE2Q5VT97 1194 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 SLC39A5Q6ZMH5 540 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 ARMCX2Q7L311 632 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 IQCA1Q86XH1 822 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 FERMT2Q96AC1 680 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 FGD4Q96M96 766 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 LBHD1Q9BQE6 289 aaPredicted RBP14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 UBE2OQ9C0C9 1292 aaKnown RBP14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 ABHD16BQ9H3Z7 469 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 GPCPD1Q9NPB8 672 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 CTNNA3Q9UI47 895 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 PHF24Q9UPV7 400 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 SZT2Q5T011 3432 aa14.53□□□□□ -0.08
CTDNEP1-205ENST00000570828 SYNRGQ9UMZ2 1314 aa14.52□□□□□ -0.08
CTDNEP1-205ENST00000570828 PDHBP11177 359 aa14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 GSPT1P15170 499 aaKnown RBP14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 MDM2Q00987 491 aaPredicted RBP14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 CNTN2Q02246 1040 aa14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 ACVR2BQ13705 512 aa14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 TRIM60Q495X7 471 aa14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 CCDC178Q5BJE1 867 aa14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 TTBK2Q6IQ55 1244 aa14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 BTNL9Q6UXG8 535 aa14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 CCDC144CPQ8IYA2 1237 aa14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 TDHQ8IZJ6 230 aa14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 FAM133AQ8N9E0 248 aa14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 RANBP17Q9H2T7 1088 aaKnown RBP14.52□□□□□ -0.09
CTDNEP1-205ENST00000570828 RAD50Q92878 1312 aa14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 ASB14A6NK59 587 aa14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 KDM4AO75164 1064 aa14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 ADAMTS4O75173 837 aa14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 DUSP11O75319 330 aaKnown RBP14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 ZNF543Q08ER8 600 aa14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 SNX17Q15036 470 aa14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 CCDC144BQ3MJ40 725 aa14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 MUM1L1Q5H9M0 696 aa14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 NSMFQ6X4W1 530 aa14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 ZKSCAN3Q9BRR0 538 aa14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 SPC25Q9HBM1 224 aa14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 PRDM5Q9NQX1 630 aaPredicted RBP14.51□□□□□ -0.09
CTDNEP1-205ENST00000570828 A0A1W2PQ45 241 aaPredicted RBP14.5□□□□□ -0.09
CTDNEP1-205ENST00000570828 A0A1W2PQY0 241 aa14.5□□□□□ -0.09
CTDNEP1-205ENST00000570828 B4E1Z4 1266 aa14.5□□□□□ -0.09
CTDNEP1-205ENST00000570828 GPATCH4Q5T3I0 446 aaKnown RBP14.5□□□□□ -0.09
CTDNEP1-205ENST00000570828 C1orf53Q5VUE5 145 aa14.5□□□□□ -0.09
CTDNEP1-205ENST00000570828 DGKHQ86XP1 1220 aa14.5□□□□□ -0.09
CTDNEP1-205ENST00000570828 RUFY2Q8WXA3 655 aa14.5□□□□□ -0.09
CTDNEP1-205ENST00000570828 TSEN34Q9BSV6 310 aaKnown RBP14.5□□□□□ -0.09
CTDNEP1-205ENST00000570828 KAT14Q9H8E8 782 aa14.5□□□□□ -0.09
CTDNEP1-205ENST00000570828 CNNM2Q9H8M5 875 aa14.5□□□□□ -0.09
CTDNEP1-205ENST00000570828 CYP39A1Q9NYL5 469 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms