RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 ACSL6Q9UKU0 697 aa9.45□□□□□ -0.9
CDC27-212ENST00000570818 C2orf71A6NGG8 1288 aa9.44□□□□□ -0.9
CDC27-212ENST00000570818 STXBP3O00186 592 aa9.44□□□□□ -0.9
CDC27-212ENST00000570818 VAMP4O75379 141 aa9.44□□□□□ -0.9
CDC27-212ENST00000570818 TSPAN15O95858 294 aa9.44□□□□□ -0.9
CDC27-212ENST00000570818 NAALADL2Q58DX5 795 aa9.44□□□□□ -0.9
CDC27-212ENST00000570818 TMEM52Q8NDY8 209 aa9.44□□□□□ -0.9
CDC27-212ENST00000570818 KCNN1Q92952 543 aa9.44□□□□□ -0.9
CDC27-212ENST00000570818 JMJD8Q96S16 334 aa9.44□□□□□ -0.9
CDC27-212ENST00000570818 IMPACTQ9P2X3 320 aa9.44□□□□□ -0.9
CDC27-212ENST00000570818 APEX2Q9UBZ4 518 aa9.44□□□□□ -0.9
CDC27-212ENST00000570818 SEMA7AO75326 666 aa9.43□□□□□ -0.9
CDC27-212ENST00000570818 KCNH1O95259 989 aa9.43□□□□□ -0.9
CDC27-212ENST00000570818 L1CAMP32004 1257 aa9.43□□□□□ -0.9
CDC27-212ENST00000570818 KRTAP4-12Q9BQ66 201 aa9.43□□□□□ -0.9
CDC27-212ENST00000570818 EMC9Q9Y3B6 208 aa9.43□□□□□ -0.9
CDC27-212ENST00000570818 HRKO00198 91 aa9.42□□□□□ -0.9
CDC27-212ENST00000570818 AGRPO00253 132 aa9.42□□□□□ -0.9
CDC27-212ENST00000570818 CORO7P57737 925 aa9.42□□□□□ -0.9
CDC27-212ENST00000570818 ERVFRD-1P60508 538 aa9.42□□□□□ -0.9
CDC27-212ENST00000570818 ZNF124Q15973 351 aa9.42□□□□□ -0.9
CDC27-212ENST00000570818 SV2CQ496J9 727 aa9.42□□□□□ -0.9
CDC27-212ENST00000570818 EEPD1Q7L9B9 569 aa9.42□□□□□ -0.9
CDC27-212ENST00000570818 EPN3Q9H201 632 aa9.42□□□□□ -0.9
CDC27-212ENST00000570818 TCAF2A6NFQ2 919 aa9.41□□□□□ -0.9
CDC27-212ENST00000570818 DBX1A6NMT0 343 aa9.41□□□□□ -0.9
CDC27-212ENST00000570818 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.41□□□□□ -0.9
CDC27-212ENST00000570818 STK10O94804 968 aaKnown RBP9.41□□□□□ -0.9
CDC27-212ENST00000570818 PAMP19021 973 aa9.41□□□□□ -0.9
CDC27-212ENST00000570818 GLDCP23378 1020 aa9.41□□□□□ -0.9
CDC27-212ENST00000570818 ANKS3Q6ZW76 656 aa9.41□□□□□ -0.9
CDC27-212ENST00000570818 ANKLE2Q86XL3 938 aa9.41□□□□□ -0.9
CDC27-212ENST00000570818 SUSD5O60279 629 aa9.4□□□□□ -0.9
CDC27-212ENST00000570818 TRIM59Q8IWR1 403 aa9.4□□□□□ -0.9
CDC27-212ENST00000570818 ZNF513Q8N8E2 541 aaPredicted RBP9.4□□□□□ -0.9
CDC27-212ENST00000570818 PDLIM7Q9NR12 457 aa9.4□□□□□ -0.9
CDC27-212ENST00000570818 SIRT5Q9NXA8 310 aa9.4□□□□□ -0.9
CDC27-212ENST00000570818 PPP1R1BQ9UD71 204 aaPredicted RBP9.4□□□□□ -0.9
CDC27-212ENST00000570818 NPHP3-ACAD11A0A0J9YXS1 232 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 KRTAP9-6A0A140TA67 174 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 TEX51A0A1B0GUA7 166 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 EFEMP2O95967 443 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 CEBPAP49715 358 aaPredicted RBP9.39□□□□□ -0.91
CDC27-212ENST00000570818 NR1I3Q14994 352 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 CKAP2LQ8IYA6 745 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 NLGN2Q8NFZ4 835 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 HNRNPLLQ8WVV9 542 aaKnown RBP9.39□□□□□ -0.91
CDC27-212ENST00000570818 C8orf37Q96NL8 207 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 TOX2Q96NM4 488 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 MCMBPQ9BTE3 642 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 TRIM55Q9BYV6 548 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 MCOLN1Q9GZU1 580 aa9.39□□□□□ -0.91
CDC27-212ENST00000570818 B2RBV5 119 aa9.38□□□□□ -0.91
CDC27-212ENST00000570818 ETV2O00321 342 aaPredicted RBP9.38□□□□□ -0.91
CDC27-212ENST00000570818 MED14OSP0DP75 135 aa9.38□□□□□ -0.91
CDC27-212ENST00000570818 MVKQ03426 396 aa9.38□□□□□ -0.91
CDC27-212ENST00000570818 RAB3GAP1Q15042 981 aa9.38□□□□□ -0.91
CDC27-212ENST00000570818 GTF2IRD2BQ6EKJ0 949 aa9.38□□□□□ -0.91
CDC27-212ENST00000570818 GTF2IRD2Q86UP8 949 aa9.38□□□□□ -0.91
CDC27-212ENST00000570818 CABP7Q86V35 215 aa9.38□□□□□ -0.91
CDC27-212ENST00000570818 TNFRSF12AQ9NP84 129 aa9.38□□□□□ -0.91
CDC27-212ENST00000570818 CYP26B1Q9NR63 512 aa9.38□□□□□ -0.91
CDC27-212ENST00000570818 U2SURPO15042 1029 aaKnown RBP9.37□□□□□ -0.91
CDC27-212ENST00000570818 GJB6O95452 261 aa9.37□□□□□ -0.91
CDC27-212ENST00000570818 ATP2B1P20020 1258 aa9.37□□□□□ -0.91
CDC27-212ENST00000570818 SRSF3P84103 164 aaKnown RBP9.37□□□□□ -0.91
CDC27-212ENST00000570818 SCRN1Q12765 414 aa9.37□□□□□ -0.91
CDC27-212ENST00000570818 KIR3DS1Q14943 382 aa9.37□□□□□ -0.91
CDC27-212ENST00000570818 BICRALQ6AI39 1079 aa9.37□□□□□ -0.91
CDC27-212ENST00000570818 ATG14Q6ZNE5 492 aa9.37□□□□□ -0.91
CDC27-212ENST00000570818 KRTAP19-1Q8IUB9 90 aa9.37□□□□□ -0.91
CDC27-212ENST00000570818 TANGO6Q9C0B7 1094 aa9.37□□□□□ -0.91
CDC27-212ENST00000570818 NKX2-4Q9H2Z4 354 aa9.37□□□□□ -0.91
CDC27-212ENST00000570818 KCNK12Q9HB15 430 aa9.37□□□□□ -0.91
CDC27-212ENST00000570818 MYOCOSA0A1B0GUC4 107 aa9.36□□□□□ -0.91
CDC27-212ENST00000570818 NUDT19A8MXV4 375 aa9.36□□□□□ -0.91
CDC27-212ENST00000570818 C1QTNF9P0C862 333 aa9.36□□□□□ -0.91
CDC27-212ENST00000570818 SDHBP21912 280 aa9.36□□□□□ -0.91
CDC27-212ENST00000570818 YBX1P67809 324 aaKnown RBP9.36□□□□□ -0.91
CDC27-212ENST00000570818 DLG4P78352 724 aa9.36□□□□□ -0.91
CDC27-212ENST00000570818 DDR2Q16832 855 aa9.36□□□□□ -0.91
CDC27-212ENST00000570818 COPS5Q92905 334 aa9.36□□□□□ -0.91
CDC27-212ENST00000570818 MRGPRX3Q96LB0 322 aa9.36□□□□□ -0.91
CDC27-212ENST00000570818 CCDC140Q96MF4 163 aa9.36□□□□□ -0.91
CDC27-212ENST00000570818 NPHS1O60500 1241 aa9.35□□□□□ -0.91
CDC27-212ENST00000570818 ITGAVP06756 1048 aa9.35□□□□□ -0.91
CDC27-212ENST00000570818 HOXC12P31275 282 aa9.35□□□□□ -0.91
CDC27-212ENST00000570818 ZNF227Q86WZ6 799 aa9.35□□□□□ -0.91
CDC27-212ENST00000570818 ZSCAN18Q8TBC5 510 aaPredicted RBP9.35□□□□□ -0.91
CDC27-212ENST00000570818 MICAL1Q8TDZ2 1067 aa9.35□□□□□ -0.91
CDC27-212ENST00000570818 ST7Q9NRC1 585 aa9.35□□□□□ -0.91
CDC27-212ENST00000570818 IQCA1LA6NCM1 817 aa9.34□□□□□ -0.91
CDC27-212ENST00000570818 SRGAP3O43295 1099 aa9.34□□□□□ -0.91
CDC27-212ENST00000570818 CPP00450 1065 aa9.34□□□□□ -0.91
CDC27-212ENST00000570818 CYBBP04839 570 aa9.34□□□□□ -0.91
CDC27-212ENST00000570818 MRM1Q6IN84 353 aaKnown RBP9.34□□□□□ -0.91
CDC27-212ENST00000570818 IQCEQ6IPM2 695 aa9.34□□□□□ -0.91
CDC27-212ENST00000570818 PAQR3Q6TCH7 311 aa9.34□□□□□ -0.91
CDC27-212ENST00000570818 DBR1Q9UK59 544 aaKnown RBP9.34□□□□□ -0.91
CDC27-212ENST00000570818 KLF4O43474 513 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms