RNA–Protein interactions for RNA: ENST00000570146.3

TCF4-244, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-244ENST00000570146 EPOPA6NHQ4 379 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 ATP2A1O14983 1001 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 DYNC1LI2O43237 492 aaPredicted RBP12.34□□□□□ -0.43
TCF4-244ENST00000570146 LEXMQ3ZCV2 418 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.34□□□□□ -0.43
TCF4-244ENST00000570146 FAM178BQ8IXR5 827 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 SDR42E1Q8WUS8 393 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 DYNLL2Q96FJ2 89 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 AGBL1Q96MI9 1066 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 ZBED2Q9BTP6 218 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 UBE2ZQ9H832 354 aaPredicted RBP12.34□□□□□ -0.43
TCF4-244ENST00000570146 ATP8A2Q9NTI2 1148 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 FAM50BQ9Y247 325 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 Q9Y3F1 56 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 MYH1P12882 1939 aa12.34□□□□□ -0.43
TCF4-244ENST00000570146 USP17L12C9JPN9 530 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 USP17L21D6R901 530 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 CTAGE5O15320 804 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 DCXO43602 365 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 BAIAP3O94812 1187 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 CYP2D6P10635 497 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 PDE6AP16499 860 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 CDK8P49336 464 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 OAZ1P54368 228 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 MFSD14AQ96MC6 490 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 FBXL18Q96ME1 805 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 ANTXR1Q9H6X2 564 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 CD320Q9NPF0 282 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 GPHNQ9NQX3 736 aaPredicted RBP12.33□□□□□ -0.44
TCF4-244ENST00000570146 RIPK3Q9Y572 518 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 LRRC37A2A6NM11 1700 aa12.33□□□□□ -0.44
TCF4-244ENST00000570146 CDK5RAP2Q96SN8 1893 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 PYGBP11216 843 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 KCNA5P22460 613 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 PSMC6P62333 389 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 BFSP2Q13515 415 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 BRDTQ58F21 947 aaPredicted RBP12.32□□□□□ -0.44
TCF4-244ENST00000570146 IQSEC1Q6DN90 963 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 PTCRAQ6ISU1 281 aaPredicted RBP12.32□□□□□ -0.44
TCF4-244ENST00000570146 KIFC2Q96AC6 838 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 UPF3BQ9BZI7 483 aaKnown RBP12.32□□□□□ -0.44
TCF4-244ENST00000570146 OCEL1Q9H607 264 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 POLR3EQ9NVU0 708 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 TLR7Q9NYK1 1049 aaKnown RBP12.32□□□□□ -0.44
TCF4-244ENST00000570146 GNEQ9Y223 722 aaKnown RBP12.32□□□□□ -0.44
TCF4-244ENST00000570146 COG6Q9Y2V7 657 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 GRIN2DO15399 1336 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 TNKSO95271 1327 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 ZNF532Q9HCE3 1301 aa12.32□□□□□ -0.44
TCF4-244ENST00000570146 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.31□□□□□ -0.44
TCF4-244ENST00000570146 FDX1P10109 184 aa12.31□□□□□ -0.44
TCF4-244ENST00000570146 CYP2C9P11712 490 aa12.31□□□□□ -0.44
TCF4-244ENST00000570146 C16orf86Q6ZW13 317 aa12.31□□□□□ -0.44
TCF4-244ENST00000570146 SSH3Q8TE77 659 aa12.31□□□□□ -0.44
TCF4-244ENST00000570146 EAF2Q96CJ1 260 aaPredicted RBP12.31□□□□□ -0.44
TCF4-244ENST00000570146 CRBNQ96SW2 442 aa12.31□□□□□ -0.44
TCF4-244ENST00000570146 ACAD9Q9H845 621 aa12.31□□□□□ -0.44
TCF4-244ENST00000570146 SLC38A10Q9HBR0 1119 aa12.31□□□□□ -0.44
TCF4-244ENST00000570146 RAVER2Q9HCJ3 691 aaKnown RBP12.31□□□□□ -0.44
TCF4-244ENST00000570146 HOMER2Q9NSB8 354 aa12.31□□□□□ -0.44
TCF4-244ENST00000570146 TRMT13Q9NUP7 481 aaKnown RBP12.31□□□□□ -0.44
TCF4-244ENST00000570146 FEM1BQ9UK73 627 aa12.31□□□□□ -0.44
TCF4-244ENST00000570146 NOD1Q9Y239 953 aa12.31□□□□□ -0.44
TCF4-244ENST00000570146 PRRC2BQ5JSZ5 2229 aaKnown RBP12.31□□□□□ -0.44
TCF4-244ENST00000570146 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.3□□□□□ -0.44
TCF4-244ENST00000570146 F5H6K3 240 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 LPXNO60711 386 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 SMPD1P17405 629 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 CPT1AP50416 773 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 RARSP54136 660 aaKnown RBP12.3□□□□□ -0.44
TCF4-244ENST00000570146 ATP8B2P98198 1209 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 FOXK2Q01167 660 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 KLRC3Q07444 240 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 FAM47CQ5HY64 1035 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 C12orf60Q5U649 245 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 ERC1Q8IUD2 1116 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 LCORLQ8N3X6 602 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 CCDC155Q8N6L0 562 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 GDPD5Q8WTR4 605 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 NUP88Q99567 741 aaPredicted RBP12.3□□□□□ -0.44
TCF4-244ENST00000570146 KATNBL1Q9H079 304 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 CTNNA3Q9UI47 895 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 NOP58Q9Y2X3 529 aaKnown RBP12.3□□□□□ -0.44
TCF4-244ENST00000570146 ASTN1O14525 1302 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 RAD50Q92878 1312 aa12.3□□□□□ -0.44
TCF4-244ENST00000570146 BCAR3O75815 825 aa12.29□□□□□ -0.44
TCF4-244ENST00000570146 NDUFB10O96000 172 aa12.29□□□□□ -0.44
TCF4-244ENST00000570146 IQCF3P0C7M6 154 aa12.29□□□□□ -0.44
TCF4-244ENST00000570146 CNTN2Q02246 1040 aa12.29□□□□□ -0.44
TCF4-244ENST00000570146 LRRFIP1Q32MZ4 808 aaKnown RBP12.29□□□□□ -0.44
TCF4-244ENST00000570146 AACSQ86V21 672 aa12.29□□□□□ -0.44
TCF4-244ENST00000570146 VWCEQ96DN2 955 aa12.29□□□□□ -0.44
TCF4-244ENST00000570146 FGD4Q96M96 766 aa12.29□□□□□ -0.44
TCF4-244ENST00000570146 TGS1Q96RS0 853 aaKnown RBP12.29□□□□□ -0.44
TCF4-244ENST00000570146 PRRX2Q99811 253 aa12.29□□□□□ -0.44
TCF4-244ENST00000570146 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
TCF4-244ENST00000570146 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.29□□□□□ -0.446e-7■■■■■ 41.4
TCF4-244ENST00000570146 ARMT1Q9H993 441 aa12.29□□□□□ -0.44
TCF4-244ENST00000570146 MKNK2Q9HBH9 465 aa12.29□□□□□ -0.44
TCF4-244ENST00000570146 NYAP2Q9P242 653 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms