RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 SUMF1Q8NBK3 374 aa10.06□□□□□ -0.8
SNX29-208ENST00000569801 PHOSPHO2Q8TCD6 241 aa10.06□□□□□ -0.8
SNX29-208ENST00000569801 VWCEQ96DN2 955 aa10.06□□□□□ -0.8
SNX29-208ENST00000569801 NOL10Q9BSC4 688 aaKnown RBP10.06□□□□□ -0.8
SNX29-208ENST00000569801 NDUFB9Q9Y6M9 179 aa10.06□□□□□ -0.8
SNX29-208ENST00000569801 FBN3Q75N90 2809 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 SLC30A4O14863 429 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 BAG3O95817 575 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 PGK1P00558 417 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 Q3C1V9 767 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 AACSQ86V21 672 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 ERC1Q8IUD2 1116 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 CCDC105Q8IYK2 499 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 BANK1Q8NDB2 785 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 NPLOC4Q8TAT6 608 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 MRPL38Q96DV4 380 aaKnown RBP10.05□□□□□ -0.8
SNX29-208ENST00000569801 SLC9A7Q96T83 725 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 CWC22Q9HCG8 908 aaKnown RBP10.05□□□□□ -0.8
SNX29-208ENST00000569801 XPNPEP3Q9NQH7 507 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 U3KPZ7 1027 aaPredicted RBP10.05□□□□□ -0.8
SNX29-208ENST00000569801 MYH1P12882 1939 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 FLT1P17948 1338 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 MROH7Q68CQ1 1323 aa10.05□□□□□ -0.8
SNX29-208ENST00000569801 IGSF3O75054 1194 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 IGHA2P01877 340 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 ARP10275 920 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 MS4A1P11836 297 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 PLCG2P16885 1265 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 CAP2P40123 477 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 CDK7P50613 346 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 RIPPLY3P57055 190 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 DYNLL1P63167 89 aaKnown RBP10.04□□□□□ -0.8
SNX29-208ENST00000569801 TIGD5Q53EQ6 642 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 VARS2Q5ST30 1063 aaKnown RBP10.04□□□□□ -0.8
SNX29-208ENST00000569801 MAPKAPK5Q8IW41 473 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 SIRT2Q8IXJ6 389 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 DTWD2Q8NBA8 298 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
SNX29-208ENST00000569801 NUP133Q8WUM0 1156 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 HIPK3Q9H422 1215 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 ANTXR1Q9H6X2 564 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 IL1RAPL2Q9NP60 686 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 PI4KBQ9UBF8 816 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 HERC5Q9UII4 1024 aaKnown RBP10.04□□□□□ -0.8
SNX29-208ENST00000569801 DDX19BQ9UMR2 479 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 USP18Q9UMW8 372 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 COG6Q9Y2V7 657 aa10.04□□□□□ -0.8
SNX29-208ENST00000569801 IDH1O75874 414 aaKnown RBP10.03□□□□□ -0.8
SNX29-208ENST00000569801 CYP7A1P22680 504 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 ERVK-21P61565 698 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 PABPC4Q13310 644 aaKnown RBP eCLIP10.03□□□□□ -0.8
SNX29-208ENST00000569801 PRAMEF19Q5SWL8 479 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 C19orf48Q6RUI8 117 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 ZBTB33Q86T24 672 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 RPAP2Q8IXW5 612 aaPredicted RBP10.03□□□□□ -0.8
SNX29-208ENST00000569801 MAGEB6Q8N7X4 407 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 MIGA1Q8NAN2 632 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 ZNF280CQ8ND82 737 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 NAV1Q8NEY1 1877 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 RHPN1Q8TCX5 695 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 TGFBRAP1Q8WUH2 860 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 RPGRIP1Q96KN7 1286 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 TGS1Q96RS0 853 aaKnown RBP10.03□□□□□ -0.8
SNX29-208ENST00000569801 DHX36Q9H2U1 1008 aaKnown RBP10.03□□□□□ -0.8
SNX29-208ENST00000569801 MFSD1Q9H3U5 465 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 DNAJC18Q9H819 358 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 ZBTB40Q9NUA8 1239 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 CTNNA3Q9UI47 895 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 RCAN3Q9UKA8 241 aa10.03□□□□□ -0.8
SNX29-208ENST00000569801 CFAP46Q8IYW2 2715 aa10.02□□□□□ -0.81
SNX29-208ENST00000569801 UBR5O95071 2799 aaPredicted RBP10.02□□□□□ -0.81
SNX29-208ENST00000569801 PI15O43692 258 aa10.02□□□□□ -0.81
SNX29-208ENST00000569801 CCR10P46092 362 aa10.02□□□□□ -0.81
SNX29-208ENST00000569801 ACLYP53396 1101 aa10.02□□□□□ -0.81
SNX29-208ENST00000569801 JAG1P78504 1218 aa10.02□□□□□ -0.81
SNX29-208ENST00000569801 SPP2Q13103 211 aa10.02□□□□□ -0.81
SNX29-208ENST00000569801 PTPROQ16827 1216 aa10.02□□□□□ -0.81
SNX29-208ENST00000569801 SHROOM1Q2M3G4 852 aaPredicted RBP10.02□□□□□ -0.81
SNX29-208ENST00000569801 HSP90AB4PQ58FF6 505 aa10.02□□□□□ -0.81
SNX29-208ENST00000569801 ZC3H14Q6PJT7 736 aaKnown RBP10.02□□□□□ -0.81
SNX29-208ENST00000569801 METTL16Q86W50 562 aaKnown RBP10.02□□□□□ -0.81
SNX29-208ENST00000569801 PROCA1Q8NCQ7 364 aaPredicted RBP10.02□□□□□ -0.81
SNX29-208ENST00000569801 ZCCHC14Q8WYQ9 949 aaKnown RBP10.02□□□□□ -0.81
SNX29-208ENST00000569801 TMEM121BQ9BXQ6 578 aaPredicted RBP10.02□□□□□ -0.81
SNX29-208ENST00000569801 SAP30BPQ9UHR5 308 aaKnown RBP10.02□□□□□ -0.81
SNX29-208ENST00000569801 CD207Q9UJ71 328 aa10.02□□□□□ -0.81
SNX29-208ENST00000569801 PALD1Q9ULE6 856 aa10.02□□□□□ -0.81
SNX29-208ENST00000569801 RAI2Q9Y5P3 530 aa10.02□□□□□ -0.81
SNX29-208ENST00000569801 USP17L5A8MUK1 530 aa10.01□□□□□ -0.81
SNX29-208ENST00000569801 TLR3O15455 904 aaKnown RBP10.01□□□□□ -0.81
SNX29-208ENST00000569801 HMMRO75330 724 aa10.01□□□□□ -0.81
SNX29-208ENST00000569801 HOXC6P09630 235 aa10.01□□□□□ -0.81
SNX29-208ENST00000569801 HMGCS2P54868 508 aa10.01□□□□□ -0.81
SNX29-208ENST00000569801 CTC1Q2NKJ3 1217 aa10.01□□□□□ -0.81
SNX29-208ENST00000569801 C20orf194Q5TEA3 1177 aa10.01□□□□□ -0.81
SNX29-208ENST00000569801 FOXP4Q8IVH2 680 aaPredicted RBP10.01□□□□□ -0.81
SNX29-208ENST00000569801 FAM126BQ8IXS8 530 aa10.01□□□□□ -0.81
SNX29-208ENST00000569801 KIF1BPQ96EK5 621 aa10.01□□□□□ -0.81
SNX29-208ENST00000569801 TBC1D2Q9BYX2 928 aa10.01□□□□□ -0.81
SNX29-208ENST00000569801 RBPJLQ9UBG7 517 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms