RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 SEPT4O43236 478 aa16.1■□□□□ 0.17
HERPUD1-218ENST00000569569 DHX16O60231 1041 aaKnown RBP16.1■□□□□ 0.17
HERPUD1-218ENST00000569569 LIFRP42702 1097 aa16.1■□□□□ 0.17
HERPUD1-218ENST00000569569 KRT32Q14532 448 aa16.1■□□□□ 0.17
HERPUD1-218ENST00000569569 CDC37Q16543 378 aaPredicted RBP16.1■□□□□ 0.17
HERPUD1-218ENST00000569569 RASEFQ8IZ41 740 aa16.1■□□□□ 0.17
HERPUD1-218ENST00000569569 FAM133AQ8N9E0 248 aa16.1■□□□□ 0.17
HERPUD1-218ENST00000569569 JMJD4Q9H9V9 463 aa16.1■□□□□ 0.17
HERPUD1-218ENST00000569569 VAT1LQ9HCJ6 419 aa16.1■□□□□ 0.17
HERPUD1-218ENST00000569569 CYP39A1Q9NYL5 469 aa16.1■□□□□ 0.17
HERPUD1-218ENST00000569569 SH2B2O14492 632 aaPredicted RBP16.09■□□□□ 0.17
HERPUD1-218ENST00000569569 EPB41L2O43491 1005 aaKnown RBP16.09■□□□□ 0.17
HERPUD1-218ENST00000569569 TAL1P17542 331 aaPredicted RBP16.09■□□□□ 0.17
HERPUD1-218ENST00000569569 CNTN2Q02246 1040 aa16.09■□□□□ 0.17
HERPUD1-218ENST00000569569 NSMFQ6X4W1 530 aa16.09■□□□□ 0.17
HERPUD1-218ENST00000569569 KCNB2Q92953 911 aa16.09■□□□□ 0.17
HERPUD1-218ENST00000569569 FGD4Q96M96 766 aa16.09■□□□□ 0.17
HERPUD1-218ENST00000569569 MAP3K14Q99558 947 aa16.09■□□□□ 0.17
HERPUD1-218ENST00000569569 CNPY2Q9Y2B0 182 aa16.09■□□□□ 0.17
HERPUD1-218ENST00000569569 CCDC69A6NI79 296 aa16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 NFIBO00712 420 aa16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 SNAI1O95863 264 aaPredicted RBP16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 HSPA4P34932 840 aa16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 COL9A3Q14050 684 aaPredicted RBP16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 QRICH1Q2TAL8 776 aa16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 ADCK5Q3MIX3 580 aa16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 NFXL1Q6ZNB6 911 aa16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 DHX32Q7L7V1 743 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 NECAB2Q7Z6G3 386 aa16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 ZNF654Q8IZM8 581 aa16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 NUP133Q8WUM0 1156 aa16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 CLEC4DQ8WXI8 215 aa16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 PAWRQ96IZ0 340 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 GPHNQ9NQX3 736 aaPredicted RBP16.08■□□□□ 0.16
HERPUD1-218ENST00000569569 ALPK3Q96L96 1907 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 PTPDC1A2A3K4 754 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 SOWAHBA6NEL2 793 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 ASB14A6NK59 587 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 DDAH1O94760 285 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 ZNF865P0CJ78 1059 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 EXOSC10Q01780 885 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 BAATQ14032 418 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 USH1GQ495M9 461 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 RNF207Q6ZRF8 634 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 ARMCX2Q7L311 632 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 FBXO11Q86XK2 927 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 CCDC144CPQ8IYA2 1237 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 RGS22Q8NE09 1264 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 CTCFLQ8NI51 663 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 MTMR8Q96EF0 704 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 HTATIP2Q9BUP3 242 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 LRRC2Q9BYS8 371 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 MAF1Q9H063 256 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 ABHD16BQ9H3Z7 469 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 RIOX1Q9H6W3 641 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 ABCB11O95342 1321 aa16.07■□□□□ 0.16
HERPUD1-218ENST00000569569 ZBTB5O15062 677 aa16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 CALM1P0DP23 149 aa16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 CALM2P0DP24 149 aa16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 CALM3P0DP25 149 aa16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 AKR1A1P14550 325 aa16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 KIF5BP33176 963 aa16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 ACVR2BQ13705 512 aa16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 SGMS1Q86VZ5 419 aa16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 ARRDC4Q8NCT1 418 aa16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 DIS3LQ8TF46 1054 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 AMNQ9BXJ7 453 aa16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 ADD3Q9UEY8 706 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 MRPL11Q9Y3B7 192 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 SLC12A7Q9Y666 1083 aa16.06■□□□□ 0.16
HERPUD1-218ENST00000569569 LOC102724159A0A0B4J2E5 919 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 RARBP10826 455 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 SMARCA1P28370 1054 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 GNAQP50148 359 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 RPS6P62753 249 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 TRAF1Q13077 416 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 PWP2Q15269 919 aaKnown RBP16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 ANO1Q5XXA6 986 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 DPF3Q92784 378 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 MYL10Q9BUA6 226 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 C11orf49Q9H6J7 331 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 ZHX1Q9UKY1 873 aaPredicted RBP16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 FAM184BQ9ULE4 1060 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 SNX14Q9Y5W7 946 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 CEP290O15078 2479 aa16.05■□□□□ 0.16
HERPUD1-218ENST00000569569 CYTH3O43739 400 aa16.04■□□□□ 0.16
HERPUD1-218ENST00000569569 CALML3P27482 149 aa16.04■□□□□ 0.16
HERPUD1-218ENST00000569569 SLC35G1Q2M3R5 365 aa16.04■□□□□ 0.16
HERPUD1-218ENST00000569569 SYNE3Q6ZMZ3 975 aa16.04■□□□□ 0.16
HERPUD1-218ENST00000569569 HOMER1Q86YM7 354 aa16.04■□□□□ 0.16
HERPUD1-218ENST00000569569 MCF2L2Q86YR7 1114 aa16.04■□□□□ 0.16
HERPUD1-218ENST00000569569 PURBQ96QR8 312 aaKnown RBP16.04■□□□□ 0.16
HERPUD1-218ENST00000569569 PIGSQ96S52 555 aa16.04■□□□□ 0.16
HERPUD1-218ENST00000569569 LZTS2Q9BRK4 669 aa16.04■□□□□ 0.16
HERPUD1-218ENST00000569569 USP26Q9BXU7 913 aa16.04■□□□□ 0.16
HERPUD1-218ENST00000569569 ASTN1O14525 1302 aa16.03■□□□□ 0.16
HERPUD1-218ENST00000569569 PNMA6FA0A0J9YX94 578 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms