RNA–Protein interactions for RNA: ENST00000569335.1

HERC2-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-211ENST00000569335 USP25Q9UHP3 1055 aa7.57□□□□□ -1.2
HERC2-211ENST00000569335 LEMD3Q9Y2U8 911 aa7.57□□□□□ -1.2
HERC2-211ENST00000569335 DLEC1Q9Y238 1755 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 NEDD4P46934 1319 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 UBR3Q6ZT12 1888 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 CCDC196A0A1B0GTZ2 297 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 ZBTB43O43298 467 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 ORC4O43929 436 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 BCRP11274 1271 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 GSK3AP49840 483 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 METAP2P50579 478 aaKnown RBP eCLIP7.56□□□□□ -1.2
HERC2-211ENST00000569335 HAND2P61296 217 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 CCT2P78371 535 aaKnown RBP7.56□□□□□ -1.2
HERC2-211ENST00000569335 MAP3K10Q02779 954 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 SART3Q15020 963 aaKnown RBP7.56□□□□□ -1.2
HERC2-211ENST00000569335 OCLNQ16625 522 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 RTN1Q16799 776 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 MFSD6Q6ZSS7 791 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 TMC4Q7Z404 712 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 FERMT3Q86UX7 667 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 NBPF5PQ86XG9 351 aaPredicted RBP7.56□□□□□ -1.2
HERC2-211ENST00000569335 FAM177A1Q8N128 213 aaPredicted RBP7.56□□□□□ -1.2
HERC2-211ENST00000569335 LINC00301Q8NCQ3 95 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 WASF1Q92558 559 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 CELF1Q92879 486 aaKnown RBP7.56□□□□□ -1.2
HERC2-211ENST00000569335 C8orf76Q96K31 380 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 NCOA5Q9HCD5 579 aaKnown RBP7.56□□□□□ -1.2
HERC2-211ENST00000569335 ATP8A2Q9NTI2 1148 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 ZSWIM5Q9P217 1185 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 LRP2BPQ9P2M1 347 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 CCDC39Q9UFE4 941 aa7.56□□□□□ -1.2
HERC2-211ENST00000569335 GOLGA6L4A6NEF3 574 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 CPLX1O14810 134 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 PPP6R2O75170 966 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 TPM3P06753 285 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 LIG1P18858 919 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 CYP7A1P22680 504 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 HOXA10P31260 410 aaPredicted RBP7.55□□□□□ -1.2
HERC2-211ENST00000569335 HSPA1LP34931 641 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 TERF1P54274 439 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 KIF23Q02241 960 aaPredicted RBP7.55□□□□□ -1.2
HERC2-211ENST00000569335 FAM160A1Q05DH4 1040 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 PPARAQ07869 468 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 SNW1Q13573 536 aaKnown RBP7.55□□□□□ -1.2
HERC2-211ENST00000569335 GRAPQ13588 217 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 GRIN2CQ14957 1233 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 SEC23AQ15436 765 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 TRAPPC3LQ5T215 181 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 FAM182BQ5T319 152 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 SPTY2D1Q68D10 685 aaPredicted RBP7.55□□□□□ -1.2
HERC2-211ENST00000569335 LCORLQ8N3X6 602 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 GRAPLQ8TC17 118 aaPredicted RBP7.55□□□□□ -1.2
HERC2-211ENST00000569335 VTI1AQ96AJ9 217 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 NSUN4Q96CB9 384 aaKnown RBP7.55□□□□□ -1.2
HERC2-211ENST00000569335 DDX11Q96FC9 970 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 CEP63Q96MT8 703 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 TIGD1Q96MW7 591 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 USP28Q96RU2 1077 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 MAP3K14Q99558 947 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 ARMT1Q9H993 441 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 DACT1Q9NYF0 836 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 PODXL2Q9NZ53 605 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 MARK1Q9P0L2 795 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.55□□□□□ -1.2
HERC2-211ENST00000569335 TACC3Q9Y6A5 838 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 SLC4A4Q9Y6R1 1079 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 ROBO3Q96MS0 1386 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 LRRC37AA6NMS7 1700 aa7.55□□□□□ -1.2
HERC2-211ENST00000569335 AFF2P51816 1311 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 TNRC6CQ9HCJ0 1690 aaKnown RBP7.54□□□□□ -1.2
HERC2-211ENST00000569335 B4E1Z4 1266 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 SNAP23O00161 211 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 APPP05067 770 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 CALM1P0DP23 149 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 CALM2P0DP24 149 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 CALM3P0DP25 149 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 CMA1P23946 247 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 HIBADHP31937 336 aaKnown RBP7.54□□□□□ -1.2
HERC2-211ENST00000569335 TYRO3Q06418 890 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 SFSWAPQ12872 951 aaKnown RBP7.54□□□□□ -1.2
HERC2-211ENST00000569335 LAMC2Q13753 1193 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 SLC39A14Q15043 492 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 FOXD4L6Q3SYB3 417 aaPredicted RBP7.54□□□□□ -1.2
HERC2-211ENST00000569335 TMEM67Q5HYA8 995 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 FAM173BQ6P4H8 233 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 FOXD4L3Q6VB84 417 aaPredicted RBP7.54□□□□□ -1.2
HERC2-211ENST00000569335 C1orf229Q6ZS94 237 aaPredicted RBP7.54□□□□□ -1.2
HERC2-211ENST00000569335 FAM196AQ6ZSG2 479 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 CHST3Q7LGC8 479 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 PTF1AQ7RTS3 328 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.54□□□□□ -1.2
HERC2-211ENST00000569335 NBPF11Q86T75 865 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 FMR1NBQ8N0W7 255 aaPredicted RBP7.54□□□□□ -1.2
HERC2-211ENST00000569335 TDRD7Q8NHU6 1098 aaKnown RBP7.54□□□□□ -1.2
HERC2-211ENST00000569335 WDR66Q8TBY9 1149 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 ZNF384Q8TF68 577 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 ANKS1AQ92625 1134 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 ESR2Q92731 530 aa7.54□□□□□ -1.2
HERC2-211ENST00000569335 NOL10Q9BSC4 688 aaKnown RBP7.54□□□□□ -1.2
HERC2-211ENST00000569335 TNMDQ9H2S6 317 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms