RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 TMX1Q9H3N1 280 aa8□□□□□ -1.13
UBR1-208ENST00000569066 HOMER2Q9NSB8 354 aa8□□□□□ -1.13
UBR1-208ENST00000569066 RAXQ9Y2V3 346 aa8□□□□□ -1.13
UBR1-208ENST00000569066 PLS3P13797 630 aa8□□□□□ -1.13
UBR1-208ENST00000569066 SPACA3Q8IXA5 215 aa8□□□□□ -1.13
UBR1-208ENST00000569066 GNAT3A8MTJ3 354 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 FAM155AB1AL88 458 aaPredicted RBP7.99□□□□□ -1.13
UBR1-208ENST00000569066 FKTNO75072 461 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 GSNP06396 782 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 BRDTQ58F21 947 aaPredicted RBP7.99□□□□□ -1.13
UBR1-208ENST00000569066 ZPBP2Q6X784 338 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 GIMAP7Q8NHV1 300 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 COX4I2Q96KJ9 171 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 H3BS24 57 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 EYA4O95677 639 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 CPP00450 1065 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 VAV1P15498 845 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 OXCT1P55809 520 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 RTP2Q5QGT7 225 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 GPR62Q9BZJ7 368 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 FOXP3Q9BZS1 431 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 AP5S1Q9NUS5 200 aa7.99□□□□□ -1.13
UBR1-208ENST00000569066 THRAP3Q9Y2W1 955 aaKnown RBP7.99□□□□□ -1.13
UBR1-208ENST00000569066 S100BP04271 92 aaPredicted RBP7.98□□□□□ -1.13
UBR1-208ENST00000569066 GUCY1A3Q02108 690 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 PRR23CQ6ZRP0 262 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 C22orf34Q6ZV56 151 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 MAMDC2Q7Z304 686 aaPredicted RBP7.98□□□□□ -1.13
UBR1-208ENST00000569066 ZNF655Q8N720 491 aaPredicted RBP7.98□□□□□ -1.13
UBR1-208ENST00000569066 DAGLBQ8NCG7 672 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 MAGEB10Q96LZ2 347 aaPredicted RBP7.98□□□□□ -1.13
UBR1-208ENST00000569066 CCDC140Q96MF4 163 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 LRRC4CQ9HCJ2 640 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 IGF2BP3O00425 579 aaKnown RBP eCLIP7.98□□□□□ -1.13
UBR1-208ENST00000569066 INSM1Q01101 510 aaPredicted RBP7.98□□□□□ -1.13
UBR1-208ENST00000569066 ODR4Q5SWX8 454 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 PIK3R6Q5UE93 754 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 ATL2Q8NHH9 583 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 PIWIL2Q8TC59 973 aaKnown RBP7.98□□□□□ -1.13
UBR1-208ENST00000569066 HSPA12BQ96MM6 686 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 FBXL7Q9UJT9 491 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 PLAGL2Q9UPG8 496 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 COQ6Q9Y2Z9 468 aa7.98□□□□□ -1.13
UBR1-208ENST00000569066 EFCAB14O75071 495 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 KATNA1O75449 491 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 ASLP04424 464 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 SYPP08247 313 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 GSTM1P09488 218 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 BMP8BP34820 402 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 IGFALSP35858 605 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 ID4P47928 161 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 SEPHS1P49903 392 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 CYP27C1Q4G0S4 372 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 MTDHQ86UE4 582 aaKnown RBP7.97□□□□□ -1.13
UBR1-208ENST00000569066 PPM1KQ8N3J5 372 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 USHBP1Q8N6Y0 703 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 JDP2Q8WYK2 163 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 TPSG1Q9NRR2 321 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 ZSWIM5Q9P217 1185 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 TCFL5Q9UL49 500 aa7.97□□□□□ -1.13
UBR1-208ENST00000569066 KCNA6P17658 529 aa7.96□□□□□ -1.13
UBR1-208ENST00000569066 INF2Q27J81 1249 aa7.96□□□□□ -1.13
UBR1-208ENST00000569066 PLD6Q8N2A8 252 aaKnown RBP7.96□□□□□ -1.13
UBR1-208ENST00000569066 DCAF4Q8WV16 495 aa7.96□□□□□ -1.13
UBR1-208ENST00000569066 ZNF891A8MT65 544 aaPredicted RBP7.96□□□□□ -1.14
UBR1-208ENST00000569066 WDR64B1ANS9 1081 aa7.96□□□□□ -1.14
UBR1-208ENST00000569066 ITGB2P05107 769 aa7.96□□□□□ -1.14
UBR1-208ENST00000569066 TPP2P29144 1249 aaPredicted RBP7.96□□□□□ -1.14
UBR1-208ENST00000569066 NFIAQ12857 509 aa7.96□□□□□ -1.14
UBR1-208ENST00000569066 CFAP100Q494V2 611 aa7.96□□□□□ -1.14
UBR1-208ENST00000569066 TSPYL5Q86VY4 417 aaPredicted RBP7.96□□□□□ -1.14
UBR1-208ENST00000569066 METTL14Q9HCE5 456 aaKnown RBP7.96□□□□□ -1.14
UBR1-208ENST00000569066 GPATCH2Q9NW75 528 aa7.96□□□□□ -1.14
UBR1-208ENST00000569066 GLRX3O76003 335 aaKnown RBP7.95□□□□□ -1.14
UBR1-208ENST00000569066 RNF43Q68DV7 783 aa7.95□□□□□ -1.14
UBR1-208ENST00000569066 DDX46Q7L014 1031 aaKnown RBP7.95□□□□□ -1.14
UBR1-208ENST00000569066 CPNE8Q86YQ8 564 aa7.95□□□□□ -1.14
UBR1-208ENST00000569066 UBE2FQ969M7 185 aa7.95□□□□□ -1.14
UBR1-208ENST00000569066 PPARGC1AQ9UBK2 798 aaKnown RBP7.95□□□□□ -1.14
UBR1-208ENST00000569066 MCM8Q9UJA3 840 aa7.95□□□□□ -1.14
UBR1-208ENST00000569066 NPFFR2Q9Y5X5 522 aa7.95□□□□□ -1.14
UBR1-208ENST00000569066 MEFVO15553 781 aaPredicted RBP7.95□□□□□ -1.14
UBR1-208ENST00000569066 SRGAP2CP0DJJ0 459 aa7.95□□□□□ -1.14
UBR1-208ENST00000569066 POU3F2P20265 443 aaPredicted RBP7.95□□□□□ -1.14
UBR1-208ENST00000569066 GATA4P43694 442 aa7.95□□□□□ -1.14
UBR1-208ENST00000569066 ZCCHC8Q6NZY4 707 aaKnown RBP7.95□□□□□ -1.14
UBR1-208ENST00000569066 ALYREFQ86V81 257 aaKnown RBP7.95□□□□□ -1.14
UBR1-208ENST00000569066 NXPE1Q8N323 547 aa7.95□□□□□ -1.14
UBR1-208ENST00000569066 RCBTB1Q8NDN9 531 aa7.95□□□□□ -1.14
UBR1-208ENST00000569066 SHKBP1Q8TBC3 707 aa7.95□□□□□ -1.14
UBR1-208ENST00000569066 CDADC1Q9BWV3 514 aa7.95□□□□□ -1.14
UBR1-208ENST00000569066 TMEM82A0PJX8 343 aa7.94□□□□□ -1.14
UBR1-208ENST00000569066 ZNF205O95201 554 aa7.94□□□□□ -1.14
UBR1-208ENST00000569066 CEACAM5P06731 702 aa7.94□□□□□ -1.14
UBR1-208ENST00000569066 CDCA2Q69YH5 1023 aaPredicted RBP7.94□□□□□ -1.14
UBR1-208ENST00000569066 ENOX1Q8TC92 643 aaKnown RBP7.94□□□□□ -1.14
UBR1-208ENST00000569066 PCDHA11Q9Y5I1 949 aa7.94□□□□□ -1.14
UBR1-208ENST00000569066 GUCY2FP51841 1108 aa7.94□□□□□ -1.14
UBR1-208ENST00000569066 IGSF22Q8N9C0 903 aa7.94□□□□□ -1.14
UBR1-208ENST00000569066 COG1Q8WTW3 980 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms