RNA–Protein interactions for RNA: ENST00000568945.2

MKRN3-204, Transcript of makorin ring finger protein 3, human

TSL 4

Gene MKRN3, Length 2,740 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKRN3-204	ENST00000568945	PPP1R14C	Q8TAE6	165 aa		11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	FATE1	Q969F0	183 aa		11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	GIMAP5	Q96F15	307 aa		11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	C16orf45	Q96MC5	204 aa	Predicted RBP	11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	INPP5F	Q9Y2H2	1132 aa		11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	TTLL13P	A6NNM8	815 aa		11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	DDIT3	P35638	169 aa		11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	CDK17	Q00537	523 aa		11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	PDE12	Q6L8Q7	609 aa	Known RBP	11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	C7orf61	Q8IZ16	206 aa		11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	DESI2	Q9BSY9	194 aa		11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	HPS4	Q9NQG7	708 aa		11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	MCM8	Q9UJA3	840 aa		11.14	□□□□□ -0.63
MKRN3-204	ENST00000568945	CTTNBP2	Q8WZ74	1663 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	ROCK1	Q13464	1354 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	SPDYE3	A6NKU9	549 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	NDC80	O14777	642 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	MAP3K7	O43318	606 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	PRPF3	O43395	683 aa	Known RBP	11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	RFC5	P40937	340 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	GBE1	Q04446	702 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	CCNG2	Q16589	344 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	NEK5	Q6P3R8	708 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	USP51	Q70EK9	711 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	TRIM22	Q8IYM9	498 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	NPLOC4	Q8TAT6	608 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	TBATA	Q96M53	351 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	MTMR9	Q96QG7	549 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	DNAJC18	Q9H819	358 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	HECA	Q9UBI9	543 aa	Predicted RBP	11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	GIMAP2	Q9UG22	337 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	ZNF112	Q9UJU3	913 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	ATP11B	Q9Y2G3	1177 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	CYP2D7	A0A087X1C5	515 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	ZBTB43	O43298	467 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	EVI5	O60447	810 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	YEATS4	O95619	227 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	MCM3	P25205	808 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	CHMP4BP1	P59074	171 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	CEP57	Q86XR8	500 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	WDR63	Q8IWG1	891 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	IPMK	Q8NFU5	416 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	CCHCR1	Q8TD31	782 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	CDKL2	Q92772	493 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	DTNBP1	Q96EV8	351 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	CNDP2	Q96KP4	475 aa	Known RBP	11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	UCN2	Q96RP3	112 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	SRPK1	Q96SB4	655 aa	Known RBP	11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	BLOC1S4	Q9NUP1	217 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	DDX18	Q9NVP1	670 aa	Known RBP	11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	WDR35	Q9P2L0	1181 aa		11.13	□□□□□ -0.63
MKRN3-204	ENST00000568945	LRRC9	Q6ZRR7	1453 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	TMEM127	O75204	238 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	PRKAR2A	P13861	404 aa	Known RBP	11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	NFIA	Q12857	509 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	SMAD4	Q13485	552 aa	Known RBP	11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	TCIRG1	Q13488	830 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	SERINC3	Q13530	473 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	OASL	Q15646	514 aa	Known RBP	11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	EAPP	Q56P03	285 aa	Predicted RBP	11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	FAM173B	Q6P4H8	233 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	LRRC31	Q6UY01	552 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	NCOA5	Q9HCD5	579 aa	Known RBP	11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	ATPIF1	Q9UII2	106 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	FHAD1	B1AJZ9	1412 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	ATP8B1	O43520	1251 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	OLFM2	O95897	454 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	ZRSR1	Q15695	479 aa	Known RBP	11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	TKFC	Q3LXA3	575 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	SETMAR	Q53H47	684 aa	Predicted RBP	11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	KDELC1	Q6UW63	502 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	SH3BP5L	Q7L8J4	393 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	BBOF1	Q8ND07	529 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	GMCL1	Q96IK5	515 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	STK31	Q9BXU1	1019 aa		11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	ALG13	Q9NP73	1137 aa	Known RBP	11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	NOB1	Q9ULX3	412 aa	Known RBP	11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	POLR1A	O95602	1720 aa	Predicted RBP	11.12	□□□□□ -0.63
MKRN3-204	ENST00000568945	HNRNPCL2	B2RXH8	293 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	TMEM232	C9JQI7	657 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	ZBTB14	O43829	449 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	PLOD3	O60568	738 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	HNRNPCL1	O60812	293 aa	Known RBP	11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	ASMT	P46597	345 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	HAAO	P46952	286 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	TUFM	P49411	452 aa	Known RBP	11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	CAMK2B	Q13554	666 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	CYB5RL	Q6IPT4	315 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	ZNF540	Q8NDQ6	660 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	COG3	Q96JB2	828 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	TRPV6	Q9H1D0	765 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	ANKEF1	Q9NU02	776 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	KIAA1257	Q9ULG3	409 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	PAIP2B	Q9ULR5	123 aa	Known RBP	11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	ETV3	P41162	512 aa		11.11	□□□□□ -0.63
MKRN3-204	ENST00000568945	PCNX4	Q63HM2	1172 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms