RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 CRHR2Q13324 411 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 STRIP1Q5VSL9 837 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 APOBEC3FQ8IUX4 373 aaKnown RBP7.25□□□□□ -1.25
CDH13-211ENST00000568770 ANKRD18AQ8IVF6 992 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 NEDD1Q8NHV4 660 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 ZNF417Q8TAU3 575 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 GIPC2Q8TF65 315 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 JARID2Q92833 1246 aaPredicted RBP7.25□□□□□ -1.25
CDH13-211ENST00000568770 CLMNQ96JQ2 1002 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 SPACA7Q96KW9 195 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 ZNF587Q96SQ5 575 aaPredicted RBP7.25□□□□□ -1.25
CDH13-211ENST00000568770 DUSP9Q99956 384 aaKnown RBP7.25□□□□□ -1.25
CDH13-211ENST00000568770 HYPKQ9NX55 129 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 TRIM33Q9UPN9 1127 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 CUL9Q8IWT3 2517 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 MYO3BQ8WXR4 1341 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 SSC5DA1L4H1 1573 aa7.25□□□□□ -1.25
CDH13-211ENST00000568770 COL1A1P02452 1464 aaPredicted RBP7.24□□□□□ -1.25
CDH13-211ENST00000568770 METTL12A8MUP2 240 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 H0YGN5 161 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 RGS9O75916 674 aaPredicted RBP7.24□□□□□ -1.25
CDH13-211ENST00000568770 HOXB7P09629 217 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 AFF1P51825 1210 aaKnown RBP7.24□□□□□ -1.25
CDH13-211ENST00000568770 SP3Q02447 781 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 MAP3K10Q02779 954 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 KIAA0319Q5VV43 1072 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 CEP135Q66GS9 1140 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 KIAA0825Q8IV33 1275 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 NXPE3Q969Y0 559 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 WNK4Q96J92 1243 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 ZNF333Q96JL9 665 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 FAM161BQ96MY7 647 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 TCF12Q99081 682 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 MYD88Q99836 296 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 OSBPL7Q9BZF2 842 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 DEFB129Q9H1M3 183 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 JPH1Q9HDC5 661 aaPredicted RBP7.24□□□□□ -1.25
CDH13-211ENST00000568770 MINPP1Q9UNW1 487 aa7.24□□□□□ -1.25
CDH13-211ENST00000568770 PRPF40AO75400 957 aaKnown RBP7.23□□□□□ -1.25
CDH13-211ENST00000568770 PCCAP05165 728 aaPredicted RBP7.23□□□□□ -1.25
CDH13-211ENST00000568770 ZNF16P17020 682 aaPredicted RBP7.23□□□□□ -1.25
CDH13-211ENST00000568770 DGKGP49619 791 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 MMP14P50281 582 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 CCT4P50991 539 aaKnown RBP7.23□□□□□ -1.25
CDH13-211ENST00000568770 GRM2Q14416 872 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 MAP3K11Q16584 847 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 SLC9C1Q4G0N8 1177 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 DUSP27Q5VZP5 1158 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 TTLL5Q6EMB2 1281 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 ALG1LQ6GMV1 187 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 OTUD7BQ6GQQ9 843 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 LINC00114Q6XXX2 140 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 TXNRD3Q86VQ6 643 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 CCDC191Q8NCU4 936 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 GLIS3Q8NEA6 775 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 ZBED3Q96IU2 234 aaPredicted RBP7.23□□□□□ -1.25
CDH13-211ENST00000568770 CDC5LQ99459 802 aaKnown RBP7.23□□□□□ -1.25
CDH13-211ENST00000568770 PTPN18Q99952 460 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 COA1Q9GZY4 146 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 PHAXQ9H814 394 aaKnown RBP7.23□□□□□ -1.25
CDH13-211ENST00000568770 CWC25Q9NXE8 425 aaPredicted RBP7.23□□□□□ -1.25
CDH13-211ENST00000568770 FRRS1LQ9P0K9 344 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 PARP2Q9UGN5 583 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 ADAMTS8Q9UP79 889 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 ARAP2Q8WZ64 1704 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 MGAMO43451 1857 aa7.23□□□□□ -1.25
CDH13-211ENST00000568770 LAMA2P24043 3122 aaKnown RBP7.22□□□□□ -1.25
CDH13-211ENST00000568770 PDE2AO00408 941 aaPredicted RBP7.22□□□□□ -1.25
CDH13-211ENST00000568770 DLL1O00548 723 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 GADD45BO75293 160 aaPredicted RBP7.22□□□□□ -1.25
CDH13-211ENST00000568770 KLRK1P26718 216 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 GRIA4P48058 902 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 CTSWP56202 376 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 INSM1Q01101 510 aaPredicted RBP7.22□□□□□ -1.25
CDH13-211ENST00000568770 SPRED3Q2MJR0 410 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 SLC4A8Q2Y0W8 1093 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 GDF6Q6KF10 455 aaPredicted RBP7.22□□□□□ -1.25
CDH13-211ENST00000568770 NXPE4Q6UWF7 544 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 NBPF11Q86T75 865 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 CCDC146Q8IYE0 955 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 TMEM102Q8N9M5 508 aaPredicted RBP7.22□□□□□ -1.25
CDH13-211ENST00000568770 TTC9Q92623 222 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 LACRTQ9GZZ8 138 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 SH2B1Q9NRF2 756 aaPredicted RBP7.22□□□□□ -1.25
CDH13-211ENST00000568770 BSDC1Q9NW68 430 aaPredicted RBP7.22□□□□□ -1.25
CDH13-211ENST00000568770 PCDHAC2Q9Y5I4 1007 aa7.22□□□□□ -1.25
CDH13-211ENST00000568770 RBM47A0AV96 593 aaKnown RBP7.21□□□□□ -1.26
CDH13-211ENST00000568770 UNCXA6NJT0 531 aa7.21□□□□□ -1.26
CDH13-211ENST00000568770 USP2O75604 605 aaPredicted RBP7.21□□□□□ -1.26
CDH13-211ENST00000568770 NID1P14543 1247 aa7.21□□□□□ -1.26
CDH13-211ENST00000568770 IREB2P48200 963 aaKnown RBP7.21□□□□□ -1.26
CDH13-211ENST00000568770 ATP2B2Q01814 1243 aa7.21□□□□□ -1.26
CDH13-211ENST00000568770 DLGAP5Q15398 846 aa7.21□□□□□ -1.26
CDH13-211ENST00000568770 SUPT20HL1Q3ZLR7 823 aa7.21□□□□□ -1.26
CDH13-211ENST00000568770 NBPF12Q5TAG4 269 aaPredicted RBP7.21□□□□□ -1.26
CDH13-211ENST00000568770 KANK3Q6NY19 840 aa7.21□□□□□ -1.26
CDH13-211ENST00000568770 CCNJLQ8IV13 435 aa7.21□□□□□ -1.26
CDH13-211ENST00000568770 SLC17A8Q8NDX2 589 aa7.21□□□□□ -1.26
CDH13-211ENST00000568770 TTLL11Q8NHH1 800 aa7.21□□□□□ -1.26
CDH13-211ENST00000568770 FBF1Q8TES7 1133 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms