RNA–Protein interactions for RNA: ENST00000568023.1

CDH5-206, Transcript of cadherin 5, humanhuman

TSL 4

Gene CDH5, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-206ENST00000568023 SH3D19Q5HYK7 790 aa12.88□□□□□ -0.35
CDH5-206ENST00000568023 SAPCD2Q86UD0 394 aa12.88□□□□□ -0.35
CDH5-206ENST00000568023 FSIP1Q8NA03 581 aa12.88□□□□□ -0.35
CDH5-206ENST00000568023 ELP3Q9H9T3 547 aa12.88□□□□□ -0.35
CDH5-206ENST00000568023 TMEM63CQ9P1W3 806 aa12.88□□□□□ -0.35
CDH5-206ENST00000568023 PNMA2Q9UL42 364 aa12.88□□□□□ -0.35
CDH5-206ENST00000568023 CTDP1Q9Y5B0 961 aaPredicted RBP12.88□□□□□ -0.35
CDH5-206ENST00000568023 ZHX2Q9Y6X8 837 aa12.88□□□□□ -0.35
CDH5-206ENST00000568023 SMCHD1A6NHR9 2005 aa12.88□□□□□ -0.35
CDH5-206ENST00000568023 M0R2N6 131 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 KINO60870 393 aaKnown RBP12.87□□□□□ -0.35
CDH5-206ENST00000568023 FDX1P10109 184 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 FAM160A1Q05DH4 1040 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 SPP2Q13103 211 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 FERMT2Q96AC1 680 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 KIFC2Q96AC6 838 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 OPTNQ96CV9 577 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 HHIPL1Q96JK4 782 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 NAP1L4Q99733 375 aaKnown RBP12.87□□□□□ -0.35
CDH5-206ENST00000568023 SLF1Q9BQI6 1058 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 TANGO6Q9C0B7 1094 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 PSTPIP2Q9H939 334 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 EMILIN3Q9NT22 766 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 TMOD4Q9NZQ9 345 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 TLL2Q9Y6L7 1015 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 THSD7BQ9C0I4 1608 aa12.87□□□□□ -0.35
CDH5-206ENST00000568023 A0A0G2JLL6 359 aaPredicted RBP12.86□□□□□ -0.35
CDH5-206ENST00000568023 FAM205CA6NFA0 338 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 LAD1O00515 517 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 CXCL11O14625 94 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 IRF6O14896 467 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 PPP1R11O60927 126 aaPredicted RBP12.86□□□□□ -0.35
CDH5-206ENST00000568023 CMA1P23946 247 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 MARCKSP29966 332 aaPredicted RBP12.86□□□□□ -0.35
CDH5-206ENST00000568023 ZNF445P59923 1031 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 EARS2Q5JPH6 523 aaKnown RBP12.86□□□□□ -0.35
CDH5-206ENST00000568023 PRRT2Q7Z6L0 340 aaPredicted RBP12.86□□□□□ -0.35
CDH5-206ENST00000568023 NEK8Q86SG6 692 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 PRPF38AQ8NAV1 312 aaKnown RBP12.86□□□□□ -0.35
CDH5-206ENST00000568023 RASGRP4Q8TDF6 673 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 SLC10A4Q96EP9 437 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 WNK4Q96J92 1243 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 RANBP17Q9H2T7 1088 aaKnown RBP12.86□□□□□ -0.35
CDH5-206ENST00000568023 DACT1Q9NYF0 836 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 FAM13BQ9NYF5 915 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 MYH7BA7E2Y1 1941 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 ABCB11O95342 1321 aa12.86□□□□□ -0.35
CDH5-206ENST00000568023 TMEM88BA6NKF7 163 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 CTAGE5O15320 804 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 ZBTB48P10074 688 aaPredicted RBP12.85□□□□□ -0.35
CDH5-206ENST00000568023 LIG1P18858 919 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 VCAM1P19320 739 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 HUNKP57058 714 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 AP3B2Q13367 1082 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 MOGSQ13724 837 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 INF2Q27J81 1249 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 USH1GQ495M9 461 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 SPRYD7Q5W111 196 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
CDH5-206ENST00000568023 TNMDQ9H2S6 317 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 CLSTN2Q9H4D0 955 aa12.85□□□□□ -0.35
CDH5-206ENST00000568023 RPAP3Q9H6T3 665 aaPredicted RBP12.85□□□□□ -0.35
CDH5-206ENST00000568023 BIN2Q9UBW5 565 aaPredicted RBP12.85□□□□□ -0.35
CDH5-206ENST00000568023 MRPL11Q9Y3B7 192 aaKnown RBP12.85□□□□□ -0.35
CDH5-206ENST00000568023 SRPRBQ9Y5M8 271 aaKnown RBP12.85□□□□□ -0.35
CDH5-206ENST00000568023 SYCE3A1L190 88 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 GOLGA6L3A6NEY3 463 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 ZBED4O75132 1171 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 FLOT1O75955 427 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 FOSP01100 380 aaPredicted RBP12.84□□□□□ -0.35
CDH5-206ENST00000568023 PTPREP23469 700 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 MCM7P33993 719 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 HMGCS2P54868 508 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 ATP2C1P98194 919 aaPredicted RBP12.84□□□□□ -0.35
CDH5-206ENST00000568023 DGKZQ13574 1117 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 ZNF174Q15697 407 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 JAKMIP3Q5VZ66 844 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 RESP18Q5W5W9 173 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 ARL6IP4Q66PJ3 421 aaKnown RBP12.84□□□□□ -0.35
CDH5-206ENST00000568023 CCDC174Q6PII3 467 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 SAMD1Q6SPF0 538 aaPredicted RBP12.84□□□□□ -0.35
CDH5-206ENST00000568023 RASAL3Q86YV0 1011 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 PROCA1Q8NCQ7 364 aaPredicted RBP12.84□□□□□ -0.35
CDH5-206ENST00000568023 TBCKQ8TEA7 893 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 CCDC34Q96HJ3 373 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 EHMT1Q9H9B1 1298 aa12.84□□□□□ -0.35
CDH5-206ENST00000568023 FBXO2Q9UK22 296 aaPredicted RBP12.84□□□□□ -0.35
CDH5-206ENST00000568023 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
CDH5-206ENST00000568023 FAM155AB1AL88 458 aaPredicted RBP12.83□□□□□ -0.36
CDH5-206ENST00000568023 CCNT1O60563 726 aaKnown RBP12.83□□□□□ -0.36
CDH5-206ENST00000568023 NR1I2O75469 434 aa12.83□□□□□ -0.36
CDH5-206ENST00000568023 ICAM1P05362 532 aa12.83□□□□□ -0.36
CDH5-206ENST00000568023 SLC10A3P09131 477 aa12.83□□□□□ -0.36
CDH5-206ENST00000568023 PFKFB1P16118 471 aa12.83□□□□□ -0.36
CDH5-206ENST00000568023 TXLNAP40222 546 aa12.83□□□□□ -0.36
CDH5-206ENST00000568023 CLK2P49760 499 aaKnown RBP12.83□□□□□ -0.36
CDH5-206ENST00000568023 SNAP25P60880 206 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms