RNA–Protein interactions for RNA: ENST00000567883.5

FANCA-227, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-227ENST00000567883 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
FANCA-227ENST00000567883 HOMER2Q9NSB8 354 aa13.17□□□□□ -0.3
FANCA-227ENST00000567883 MSRAQ9UJ68 235 aa13.17□□□□□ -0.3
FANCA-227ENST00000567883 Q9Y3F1 56 aa13.17□□□□□ -0.3
FANCA-227ENST00000567883 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.16□□□□□ -0.3
FANCA-227ENST00000567883 M0R2C6 588 aa13.16□□□□□ -0.3
FANCA-227ENST00000567883 FGBP02675 491 aa13.16□□□□□ -0.3
FANCA-227ENST00000567883 SLC3A2P08195 630 aaKnown RBP13.16□□□□□ -0.3
FANCA-227ENST00000567883 BEX3Q00994 111 aa13.16□□□□□ -0.3
FANCA-227ENST00000567883 ITGA7Q13683 1181 aa13.16□□□□□ -0.3
FANCA-227ENST00000567883 FSCN1Q16658 493 aaKnown RBP13.16□□□□□ -0.3
FANCA-227ENST00000567883 PPP4R3BQ5MIZ7 849 aa13.16□□□□□ -0.3
FANCA-227ENST00000567883 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
FANCA-227ENST00000567883 NACAP1Q9BZK3 213 aa13.16□□□□□ -0.3
FANCA-227ENST00000567883 DCTPP1Q9H773 170 aa13.16□□□□□ -0.3
FANCA-227ENST00000567883 RNF146Q9NTX7 359 aa13.16□□□□□ -0.3
FANCA-227ENST00000567883 LRRC37A2A6NM11 1700 aa13.16□□□□□ -0.3
FANCA-227ENST00000567883 ZEB2O60315 1214 aa13.15□□□□□ -0.3
FANCA-227ENST00000567883 TFAP4Q01664 338 aa13.15□□□□□ -0.3
FANCA-227ENST00000567883 IQSEC1Q6DN90 963 aa13.15□□□□□ -0.3
FANCA-227ENST00000567883 NOL8Q76FK4 1167 aaKnown RBP13.15□□□□□ -0.3
FANCA-227ENST00000567883 TLK2Q86UE8 772 aa13.15□□□□□ -0.3
FANCA-227ENST00000567883 AGBL1Q96MI9 1066 aa13.15□□□□□ -0.3
FANCA-227ENST00000567883 TRERF1Q96PN7 1200 aa13.15□□□□□ -0.3
FANCA-227ENST00000567883 AP5M1Q9H0R1 490 aa13.15□□□□□ -0.3
FANCA-227ENST00000567883 HIPK3Q9H422 1215 aa13.15□□□□□ -0.3
FANCA-227ENST00000567883 CXXC1Q9P0U4 656 aaPredicted RBP13.15□□□□□ -0.3
FANCA-227ENST00000567883 THEGQ9P2T0 379 aa13.15□□□□□ -0.3
FANCA-227ENST00000567883 GRIN2DO15399 1336 aa13.14□□□□□ -0.31
FANCA-227ENST00000567883 DYNC1LI2O43237 492 aaPredicted RBP13.14□□□□□ -0.31
FANCA-227ENST00000567883 SMPD1P17405 629 aa13.14□□□□□ -0.31
FANCA-227ENST00000567883 SLC1A4P43007 532 aa13.14□□□□□ -0.31
FANCA-227ENST00000567883 ADGRE1Q14246 886 aa13.14□□□□□ -0.31
FANCA-227ENST00000567883 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
FANCA-227ENST00000567883 TAPT1Q6NXT6 567 aa13.14□□□□□ -0.31
FANCA-227ENST00000567883 RPUSD2Q8IZ73 545 aaKnown RBP13.14□□□□□ -0.31
FANCA-227ENST00000567883 MORC4Q8TE76 937 aa13.14□□□□□ -0.31
FANCA-227ENST00000567883 PPM1EQ8WY54 764 aa13.14□□□□□ -0.31
FANCA-227ENST00000567883 ASB2Q96Q27 587 aa13.14□□□□□ -0.31
FANCA-227ENST00000567883 NOC4LQ9BVI4 516 aaKnown RBP13.14□□□□□ -0.31
FANCA-227ENST00000567883 SLC28A3Q9HAS3 691 aa13.14□□□□□ -0.31
FANCA-227ENST00000567883 RCAN3Q9UKA8 241 aa13.14□□□□□ -0.31
FANCA-227ENST00000567883 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 LCTP09848 1927 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 LOC102724159A0A0B4J2E5 919 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 ALAS1P13196 640 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 MCCP23508 829 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 MRPS5P82675 430 aaKnown RBP13.13□□□□□ -0.31
FANCA-227ENST00000567883 PPARAQ07869 468 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 IKQ13123 557 aaPredicted RBP13.13□□□□□ -0.31
FANCA-227ENST00000567883 PWP2Q15269 919 aaKnown RBP13.13□□□□□ -0.31
FANCA-227ENST00000567883 TSHZ3Q63HK5 1081 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 SEC62Q99442 399 aaKnown RBP13.13□□□□□ -0.31
FANCA-227ENST00000567883 NAPBQ9H115 298 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 TRPV6Q9H1D0 765 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 NKX2-4Q9H2Z4 354 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 VTA1Q9NP79 307 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 CYP39A1Q9NYL5 469 aa13.13□□□□□ -0.31
FANCA-227ENST00000567883 YBX2Q9Y2T7 364 aaKnown RBP13.13□□□□□ -0.31
FANCA-227ENST00000567883 B4GALT4O60513 344 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 NOVP48745 357 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 CCL23P55773 120 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 MUM1L1Q5H9M0 696 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 ZMYM1Q5SVZ6 1142 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 C20orf194Q5TEA3 1177 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 KCTD1Q719H9 257 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 OTOP2Q7RTS6 562 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 WNT8AQ9H1J5 351 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 PDGFCQ9NRA1 345 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 IL17RBQ9NRM6 502 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 PRR12Q9ULL5 1215 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 ISY1Q9ULR0 285 aaKnown RBP13.12□□□□□ -0.31
FANCA-227ENST00000567883 STX8Q9UNK0 236 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.12□□□□□ -0.31
FANCA-227ENST00000567883 SLC4A7Q9Y6M7 1214 aa13.12□□□□□ -0.31
FANCA-227ENST00000567883 ERC2O15083 957 aa13.11□□□□□ -0.31
FANCA-227ENST00000567883 ICAM1P05362 532 aa13.11□□□□□ -0.31
FANCA-227ENST00000567883 PFKMP08237 780 aa13.11□□□□□ -0.31
FANCA-227ENST00000567883 COL9A1P20849 921 aa13.11□□□□□ -0.31
FANCA-227ENST00000567883 IGFBP4P22692 258 aa13.11□□□□□ -0.31
FANCA-227ENST00000567883 DUSP28Q4G0W2 176 aa13.11□□□□□ -0.31
FANCA-227ENST00000567883 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
FANCA-227ENST00000567883 PI4K2BQ8TCG2 481 aa13.11□□□□□ -0.31
FANCA-227ENST00000567883 VWCEQ96DN2 955 aa13.11□□□□□ -0.31
FANCA-227ENST00000567883 ALDH8A1Q9H2A2 487 aaPredicted RBP13.11□□□□□ -0.31
FANCA-227ENST00000567883 ADD3Q9UEY8 706 aaKnown RBP13.11□□□□□ -0.31
FANCA-227ENST00000567883 PCDHA11Q9Y5I1 949 aa13.11□□□□□ -0.31
FANCA-227ENST00000567883 TSPY2A6NKD2 308 aa13.1□□□□□ -0.31
FANCA-227ENST00000567883 SUPT20HL2P0C7V6 817 aa13.1□□□□□ -0.31
FANCA-227ENST00000567883 PSMC6P62333 389 aa13.1□□□□□ -0.31
FANCA-227ENST00000567883 CCDC85BQ15834 202 aaPredicted RBP13.1□□□□□ -0.31
FANCA-227ENST00000567883 TMEM63BQ5T3F8 832 aa13.1□□□□□ -0.31
FANCA-227ENST00000567883 BTNL9Q6UXG8 535 aa13.1□□□□□ -0.31
FANCA-227ENST00000567883 EEPD1Q7L9B9 569 aa13.1□□□□□ -0.31
FANCA-227ENST00000567883 FBXO16Q8IX29 292 aaPredicted RBP13.1□□□□□ -0.31
FANCA-227ENST00000567883 ADAMTS19Q8TE59 1207 aa13.1□□□□□ -0.31
FANCA-227ENST00000567883 DCAF4Q8WV16 495 aa13.1□□□□□ -0.31
FANCA-227ENST00000567883 TSPYL2Q9H2G4 693 aaPredicted RBP13.1□□□□□ -0.31
FANCA-227ENST00000567883 RANBP17Q9H2T7 1088 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms