RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 MCM3APO60318 1980 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 HIP1O00291 1037 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 NFIBO00712 420 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 DUSP11O75319 330 aaKnown RBP14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 ICAM1P05362 532 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 BEX3Q00994 111 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 ZNF543Q08ER8 600 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 BAATQ14032 418 aaPredicted RBP14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 TMEM63BQ5T3F8 832 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 KLHDC9Q8NEP7 349 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 VTI1AQ96AJ9 217 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 KATNBL1Q9H079 304 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 STARD7Q9NQZ5 370 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 PDGFCQ9NRA1 345 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 CYP39A1Q9NYL5 469 aa14.37□□□□□ -0.11
GTF3C1-208ENST00000567843 PTPDC1A2A3K4 754 aa14.36□□□□□ -0.11
GTF3C1-208ENST00000567843 ITGB8P26012 769 aa14.36□□□□□ -0.11
GTF3C1-208ENST00000567843 TTC22Q5TAA0 569 aa14.36□□□□□ -0.11
GTF3C1-208ENST00000567843 BTNL9Q6UXG8 535 aa14.36□□□□□ -0.11
GTF3C1-208ENST00000567843 FBXO16Q8IX29 292 aaPredicted RBP14.36□□□□□ -0.11
GTF3C1-208ENST00000567843 ASB14A6NK59 587 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 ASGR1P07306 291 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 CLTBP09497 229 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 CALML3P27482 149 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 TNFAIP2Q03169 654 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 SHHQ15465 462 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 IMMTQ16891 758 aaKnown RBP14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 LRIT3Q3SXY7 679 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 GNASQ5JWF2 1037 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 C9orf50Q5SZB4 431 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 CCSAPQ6IQ19 270 aaPredicted RBP14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 SLC30A10Q6XR72 485 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 TTC14Q96N46 770 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 DSCC1Q9BVC3 393 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 SPC25Q9HBM1 224 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 TMEM39AQ9NV64 488 aa14.35□□□□□ -0.11
GTF3C1-208ENST00000567843 DYNC1LI2O43237 492 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 PCP11498 1178 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 SMPD1P17405 629 aa14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 GJA9P57773 515 aa14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 USH1GQ495M9 461 aa14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 C1orf53Q5VUE5 145 aa14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 IQCA1Q86XH1 822 aa14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 DEFB123Q8N688 67 aa14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 PNMA1Q8ND90 353 aa14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 ZSCAN10Q96SZ4 725 aaPredicted RBP14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 TSEN34Q9BSV6 310 aaKnown RBP14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 KAT14Q9H8E8 782 aa14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 VAT1LQ9HCJ6 419 aa14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 ZSWIM5Q9P217 1185 aa14.34□□□□□ -0.11
GTF3C1-208ENST00000567843 MOXD2PA6NHM9 499 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 CTAGE5O15320 804 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 SNHG28P0DPA3 235 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 RAG1P15918 1043 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 TAPT1Q6NXT6 567 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 CXCL17Q6UXB2 119 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 KIAA1211Q6ZU35 1233 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 DGKHQ86XP1 1220 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 NUP133Q8WUM0 1156 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 CLEC4DQ8WXI8 215 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 GLT1D1Q96MS3 346 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 UPF3AQ9H1J1 476 aaKnown RBP14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 CTNNA3Q9UI47 895 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 TNKSO95271 1327 aa14.33□□□□□ -0.12
GTF3C1-208ENST00000567843 DHX16O60231 1041 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 ALDH5A1P51649 535 aaPredicted RBP14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 EPHB4P54760 987 aa14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 PTH1RQ03431 593 aa14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 FAAP100Q0VG06 881 aa14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 RNF207Q6ZRF8 634 aa14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 CYB5R4Q7L1T6 521 aa14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 TLK2Q86UE8 772 aa14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 ENAHQ8N8S7 591 aaPredicted RBP14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 PCSK9Q8NBP7 692 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 TBC1D5Q92609 795 aa14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 FAM161BQ96MY7 647 aa14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 AP5M1Q9H0R1 490 aa14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 GNEQ9Y223 722 aaKnown RBP14.32□□□□□ -0.12
GTF3C1-208ENST00000567843 DCDC2CA8MYV0 355 aa14.31□□□□□ -0.12
GTF3C1-208ENST00000567843 CHMLP26374 656 aa14.31□□□□□ -0.12
GTF3C1-208ENST00000567843 CST5P28325 142 aaPredicted RBP14.31□□□□□ -0.12
GTF3C1-208ENST00000567843 RPS6P62753 249 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-208ENST00000567843 CDC37Q16543 378 aaPredicted RBP14.31□□□□□ -0.12
GTF3C1-208ENST00000567843 GPATCH4Q5T3I0 446 aaKnown RBP14.31□□□□□ -0.12
GTF3C1-208ENST00000567843 ADGRF4Q8IZF3 695 aa14.31□□□□□ -0.12
GTF3C1-208ENST00000567843 UBAC1Q9BSL1 405 aa14.31□□□□□ -0.12
GTF3C1-208ENST00000567843 KRT23Q9C075 422 aa14.31□□□□□ -0.12
GTF3C1-208ENST00000567843 TAF6LQ9Y6J9 622 aa14.31□□□□□ -0.12
GTF3C1-208ENST00000567843 KIAA0355O15063 1070 aa14.3□□□□□ -0.12
GTF3C1-208ENST00000567843 PSMC6P62333 389 aa14.3□□□□□ -0.12
GTF3C1-208ENST00000567843 FSCN1Q16658 493 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-208ENST00000567843 CCDC178Q5BJE1 867 aa14.3□□□□□ -0.12
GTF3C1-208ENST00000567843 ANKRD33Q7Z3H0 272 aa14.3□□□□□ -0.12
GTF3C1-208ENST00000567843 SKAP1Q86WV1 359 aa14.3□□□□□ -0.12
GTF3C1-208ENST00000567843 STAG2Q8N3U4 1231 aa14.3□□□□□ -0.12
GTF3C1-208ENST00000567843 ANKS1AQ92625 1134 aa14.3□□□□□ -0.12
GTF3C1-208ENST00000567843 PPP1R12CQ9BZL4 782 aa14.3□□□□□ -0.12
GTF3C1-208ENST00000567843 VTA1Q9NP79 307 aa14.3□□□□□ -0.12
GTF3C1-208ENST00000567843 ADD3Q9UEY8 706 aaKnown RBP14.3□□□□□ -0.12
GTF3C1-208ENST00000567843 ELP1O95163 1332 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms