RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ICAM1P05362 532 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 ZNF865P0CJ78 1059 aaPredicted RBP5.63□□□□□ -1.51
CLK3-219ENST00000567805 RARBP10826 455 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 PDHBP11177 359 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 AKR1A1P14550 325 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 GSPT1P15170 499 aaKnown RBP5.63□□□□□ -1.51
CLK3-219ENST00000567805 BMP8BP34820 402 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 SLC4A3P48751 1232 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 FXR1P51114 621 aaKnown RBP eCLIP5.63□□□□□ -1.51
CLK3-219ENST00000567805 LRRC26Q2I0M4 334 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 CCDC96Q2M329 555 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 CCDC178Q5BJE1 867 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 GJC2Q5T442 439 aaPredicted RBP5.63□□□□□ -1.51
CLK3-219ENST00000567805 ANO1Q5XXA6 986 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 BTNL9Q6UXG8 535 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 IQCA1Q86XH1 822 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 DGKHQ86XP1 1220 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 TBC1D10CQ8IV04 446 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 HS6ST3Q8IZP7 471 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 CHMP4CQ96CF2 233 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 AGBL1Q96MI9 1066 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 TRERF1Q96PN7 1200 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 RANBP17Q9H2T7 1088 aaKnown RBP5.63□□□□□ -1.51
CLK3-219ENST00000567805 CNNM2Q9H8M5 875 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 XPNPEP3Q9NQH7 507 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 HOMER2Q9NSB8 354 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 RNF146Q9NTX7 359 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 CTNNA3Q9UI47 895 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 NEDD4P46934 1319 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 RAD50Q92878 1312 aa5.63□□□□□ -1.51
CLK3-219ENST00000567805 B4E1Z4 1266 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 SNAI1O95863 264 aaPredicted RBP5.62□□□□□ -1.51
CLK3-219ENST00000567805 SNHG28P0DPA3 235 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 ALAS1P13196 640 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 TAL1P17542 331 aaPredicted RBP5.62□□□□□ -1.51
CLK3-219ENST00000567805 SYN1P17600 705 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 ZNF543Q08ER8 600 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 ACVR2BQ13705 512 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 SNX17Q15036 470 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 LRRC41Q15345 812 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 GPATCH4Q5T3I0 446 aaKnown RBP5.62□□□□□ -1.51
CLK3-219ENST00000567805 SYDE2Q5VT97 1194 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 C1orf53Q5VUE5 145 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 CCDC174Q6PII3 467 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 SLC39A5Q6ZMH5 540 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 RASGRP2Q7LDG7 609 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 RNF180Q86T96 592 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 FAM133AQ8N9E0 248 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 RUFY2Q8WXA3 655 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 FGD4Q96M96 766 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 GDF15Q99988 308 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 ZKSCAN3Q9BRR0 538 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 KRT23Q9C075 422 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 ABHD16BQ9H3Z7 469 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 A1CFQ9NQ94 594 aaKnown RBP5.62□□□□□ -1.51
CLK3-219ENST00000567805 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.62□□□□□ -1.51
CLK3-219ENST00000567805 ZHX1Q9UKY1 873 aaPredicted RBP5.62□□□□□ -1.51
CLK3-219ENST00000567805 PNMA2Q9UL42 364 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 FAM184BQ9ULE4 1060 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 CCPG1Q9ULG6 757 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 ZMYND8Q9ULU4 1186 aaPredicted RBP5.62□□□□□ -1.51
CLK3-219ENST00000567805 MTMR7Q9Y216 660 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 FRMPD2Q68DX3 1309 aaPredicted RBP5.62□□□□□ -1.51
CLK3-219ENST00000567805 KIAA1217Q5T5P2 1943 aa5.62□□□□□ -1.51
CLK3-219ENST00000567805 LOC102724159A0A0B4J2E5 919 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 SOWAHBA6NEL2 793 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 ASB14A6NK59 587 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 KDM4AO75164 1064 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 ADAMTS4O75173 837 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 DUSP11O75319 330 aaKnown RBP5.61□□□□□ -1.51
CLK3-219ENST00000567805 TNKSO95271 1327 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 PGK1P00558 417 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 CHMLP26374 656 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 SLC16A2P36021 539 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 ADCYAP1R1P41586 468 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 MAGEA10P43363 369 aaPredicted RBP5.61□□□□□ -1.51
CLK3-219ENST00000567805 RTP1P59025 263 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 SNAP25P60880 206 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 CNTN2Q02246 1040 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 PWP2Q15269 919 aaKnown RBP5.61□□□□□ -1.51
CLK3-219ENST00000567805 CCDC144BQ3MJ40 725 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 ASPRV1Q53RT3 343 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 MUM1L1Q5H9M0 696 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 EYSQ5T1H1 3165 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 TTBK2Q6IQ55 1244 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 ARMCX2Q7L311 632 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 CCDC144CPQ8IYA2 1237 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 ENAHQ8N8S7 591 aaPredicted RBP5.61□□□□□ -1.51
CLK3-219ENST00000567805 PNMA1Q8ND90 353 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 NUP133Q8WUM0 1156 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 ANKS1AQ92625 1134 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 ZSCAN10Q96SZ4 725 aaPredicted RBP5.61□□□□□ -1.51
CLK3-219ENST00000567805 UBAC1Q9BSL1 405 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 TSEN34Q9BSV6 310 aaKnown RBP5.61□□□□□ -1.51
CLK3-219ENST00000567805 IL25Q9H293 177 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 KAT14Q9H8E8 782 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 SPC25Q9HBM1 224 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 GPCPD1Q9NPB8 672 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 CYP39A1Q9NYL5 469 aa5.61□□□□□ -1.51
CLK3-219ENST00000567805 ZSWIM5Q9P217 1185 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms