RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 GJA9P57773 515 aa17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 IRX5P78411 483 aaPredicted RBP17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 SYDE2Q5VT97 1194 aa17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 CWC27Q6UX04 472 aaKnown RBP17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 PCSK9Q8NBP7 692 aaKnown RBP17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 TTC14Q96N46 770 aa17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 SPC25Q9HBM1 224 aa17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 DIAPH3Q9NSV4 1193 aa17.73■□□□□ 0.43
SCAMP2-209ENST00000567638 NEDD4P46934 1319 aa17.72■□□□□ 0.43
SCAMP2-209ENST00000567638 HIP1O00291 1037 aa17.72■□□□□ 0.43
SCAMP2-209ENST00000567638 NSMFQ6X4W1 530 aa17.72■□□□□ 0.43
SCAMP2-209ENST00000567638 ANKRD33Q7Z3H0 272 aa17.72■□□□□ 0.43
SCAMP2-209ENST00000567638 ESR2Q92731 530 aa17.72■□□□□ 0.43
SCAMP2-209ENST00000567638 GLT1D1Q96MS3 346 aa17.72■□□□□ 0.43
SCAMP2-209ENST00000567638 TOX2Q96NM4 488 aa17.72■□□□□ 0.43
SCAMP2-209ENST00000567638 GPCPD1Q9NPB8 672 aa17.72■□□□□ 0.43
SCAMP2-209ENST00000567638 ELP1O95163 1332 aa17.72■□□□□ 0.43
SCAMP2-209ENST00000567638 ZNF213O14771 459 aa17.71■□□□□ 0.43
SCAMP2-209ENST00000567638 KIAA0355O15063 1070 aa17.71■□□□□ 0.43
SCAMP2-209ENST00000567638 ASGR1P07306 291 aa17.71■□□□□ 0.43
SCAMP2-209ENST00000567638 NKX3-2P78367 333 aa17.71■□□□□ 0.43
SCAMP2-209ENST00000567638 ZNF543Q08ER8 600 aa17.71■□□□□ 0.43
SCAMP2-209ENST00000567638 SHHQ15465 462 aa17.71■□□□□ 0.43
SCAMP2-209ENST00000567638 C9orf50Q5SZB4 431 aa17.71■□□□□ 0.43
SCAMP2-209ENST00000567638 MTMR10Q9NXD2 777 aa17.71■□□□□ 0.43
SCAMP2-209ENST00000567638 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 DCDC2CA8MYV0 355 aa17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 CTAGE5O15320 804 aa17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 SNHG28P0DPA3 235 aa17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 RAG1P15918 1043 aa17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 ITGB8P26012 769 aa17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 NT5C2P49902 561 aa17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 TNFAIP2Q03169 654 aa17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 FAAP100Q0VG06 881 aa17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 GNASQ5JWF2 1037 aa17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 DDX49Q9Y6V7 483 aaKnown RBP17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 MROH7Q68CQ1 1323 aa17.7■□□□□ 0.42
SCAMP2-209ENST00000567638 NFIBO00712 420 aa17.69■□□□□ 0.42
SCAMP2-209ENST00000567638 TLK2Q86UE8 772 aa17.69■□□□□ 0.42
SCAMP2-209ENST00000567638 DGKHQ86XP1 1220 aa17.69■□□□□ 0.42
SCAMP2-209ENST00000567638 ZKSCAN3Q9BRR0 538 aa17.69■□□□□ 0.42
SCAMP2-209ENST00000567638 DSCC1Q9BVC3 393 aa17.69■□□□□ 0.42
SCAMP2-209ENST00000567638 TMEM39AQ9NV64 488 aa17.69■□□□□ 0.42
SCAMP2-209ENST00000567638 PNMA2Q9UL42 364 aa17.69■□□□□ 0.42
SCAMP2-209ENST00000567638 GNEQ9Y223 722 aaKnown RBP17.69■□□□□ 0.42
SCAMP2-209ENST00000567638 A0A0U1RQG5 324 aaPredicted RBP17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 KDM4AO75164 1064 aa17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 CDK7P50613 346 aa17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 BAATQ14032 418 aaPredicted RBP17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 FAM109BQ6ICB4 259 aaPredicted RBP17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 NOL8Q76FK4 1167 aaKnown RBP17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 FBXO16Q8IX29 292 aaPredicted RBP17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 MORC4Q8TE76 937 aa17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 PURBQ96QR8 312 aaKnown RBP17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 VTA1Q9NP79 307 aa17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 ADD3Q9UEY8 706 aaKnown RBP17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 SUPT16HQ9Y5B9 1047 aaKnown RBP17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 WDR19Q8NEZ3 1342 aa17.68■□□□□ 0.42
SCAMP2-209ENST00000567638 SMPD1P17405 629 aa17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 ALDH5A1P51649 535 aaPredicted RBP17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 BEX3Q00994 111 aa17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 CCDC178Q5BJE1 867 aa17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 GPATCH4Q5T3I0 446 aaKnown RBP17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 IQSEC1Q6DN90 963 aa17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 TAPT1Q6NXT6 567 aa17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 EEPD1Q7L9B9 569 aa17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 IQCA1Q86XH1 822 aa17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 VTI1AQ96AJ9 217 aa17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 PDGFCQ9NRA1 345 aa17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 TBX21Q9UL17 535 aa17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 STXBP5LQ9Y2K9 1186 aa17.67■□□□□ 0.42
SCAMP2-209ENST00000567638 LOC102724159A0A0B4J2E5 919 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 PTPDC1A2A3K4 754 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 B4E1Z4 1266 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 ARVCFO00192 962 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 EPHB4P54760 987 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 FPGSQ05932 587 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 PWP2Q15269 919 aaKnown RBP17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 IMMTQ16891 758 aaKnown RBP17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 SLC30A10Q6XR72 485 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 PNMA1Q8ND90 353 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 CLEC4DQ8WXI8 215 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 AP5M1Q9H0R1 490 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 CTNNA3Q9UI47 895 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 Q9Y3F1 56 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 KIAA1217Q5T5P2 1943 aa17.66■□□□□ 0.42
SCAMP2-209ENST00000567638 TIMP1P01033 207 aa17.65■□□□□ 0.42
SCAMP2-209ENST00000567638 GOLGA8HP0CJ92 632 aa17.65■□□□□ 0.42
SCAMP2-209ENST00000567638 PTGS1P23219 599 aa17.65■□□□□ 0.42
SCAMP2-209ENST00000567638 PDE4AP27815 886 aa17.65■□□□□ 0.42
SCAMP2-209ENST00000567638 FSCN1Q16658 493 aaKnown RBP17.65■□□□□ 0.42
SCAMP2-209ENST00000567638 RNF207Q6ZRF8 634 aa17.65■□□□□ 0.42
SCAMP2-209ENST00000567638 FAM126BQ8IXS8 530 aa17.65■□□□□ 0.42
SCAMP2-209ENST00000567638 ANKS1AQ92625 1134 aa17.65■□□□□ 0.42
SCAMP2-209ENST00000567638 ZSCAN10Q96SZ4 725 aaPredicted RBP17.65■□□□□ 0.42
SCAMP2-209ENST00000567638 IL25Q9H293 177 aa17.65■□□□□ 0.42
SCAMP2-209ENST00000567638 KAT14Q9H8E8 782 aa17.65■□□□□ 0.42
SCAMP2-209ENST00000567638 TLR3O15455 904 aaKnown RBP17.64■□□□□ 0.41
SCAMP2-209ENST00000567638 DYNC1LI2O43237 492 aaPredicted RBP17.64■□□□□ 0.41
SCAMP2-209ENST00000567638 CABYRO75952 493 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 217.6 ms