RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 PPFIBP1Q86W92 1011 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 NLGN1Q8N2Q7 840 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 SYT8Q8NBV8 401 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 KRTAP4-2Q9BYR5 136 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 FAN1Q9Y2M0 1017 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 ZNF451Q9Y4E5 1061 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 PCDHA5Q9Y5H7 936 aa5.76□□□□□ -1.49
CDH1-211ENST00000567320 POU4F1Q01851 419 aa5.75□□□□□ -1.49
CDH1-211ENST00000567320 CBX2Q14781 532 aaPredicted RBP5.75□□□□□ -1.49
CDH1-211ENST00000567320 TARBP2Q15633 366 aaKnown RBP5.75□□□□□ -1.49
CDH1-211ENST00000567320 TMCO4Q5TGY1 634 aa5.75□□□□□ -1.49
CDH1-211ENST00000567320 PAQR3Q6TCH7 311 aa5.75□□□□□ -1.49
CDH1-211ENST00000567320 CCDC81Q6ZN84 652 aa5.75□□□□□ -1.49
CDH1-211ENST00000567320 TAB3Q8N5C8 712 aaPredicted RBP5.75□□□□□ -1.49
CDH1-211ENST00000567320 XYLT2Q9H1B5 865 aa5.75□□□□□ -1.49
CDH1-211ENST00000567320 PDLIM7Q9NR12 457 aa5.75□□□□□ -1.49
CDH1-211ENST00000567320 FHOD1Q9Y613 1164 aa5.75□□□□□ -1.49
CDH1-211ENST00000567320 F8W031 263 aaPredicted RBP5.74□□□□□ -1.49
CDH1-211ENST00000567320 CYBBP04839 570 aa5.74□□□□□ -1.49
CDH1-211ENST00000567320 IFNGR1P15260 489 aa5.74□□□□□ -1.49
CDH1-211ENST00000567320 FANCCQ00597 558 aa5.74□□□□□ -1.49
CDH1-211ENST00000567320 GNPTABQ3T906 1256 aa5.74□□□□□ -1.49
CDH1-211ENST00000567320 ANKRD39Q53RE8 183 aa5.74□□□□□ -1.49
CDH1-211ENST00000567320 ADAT2Q7Z6V5 191 aaKnown RBP5.74□□□□□ -1.49
CDH1-211ENST00000567320 LINC01356Q8N9X3 169 aa5.74□□□□□ -1.49
CDH1-211ENST00000567320 ADCY4Q8NFM4 1077 aa5.74□□□□□ -1.49
CDH1-211ENST00000567320 PTCHD1Q96NR3 888 aa5.74□□□□□ -1.49
CDH1-211ENST00000567320 FCRL3Q96P31 734 aaPredicted RBP5.74□□□□□ -1.49
CDH1-211ENST00000567320 RTEL1Q9NZ71 1219 aa5.74□□□□□ -1.49
CDH1-211ENST00000567320 FGF10O15520 208 aaPredicted RBP5.73□□□□□ -1.49
CDH1-211ENST00000567320 L1CAMP32004 1257 aa5.73□□□□□ -1.49
CDH1-211ENST00000567320 CEBPAP49715 358 aaPredicted RBP5.73□□□□□ -1.49
CDH1-211ENST00000567320 LDLRAD1Q5T700 205 aa5.73□□□□□ -1.49
CDH1-211ENST00000567320 LSRQ86X29 649 aaPredicted RBP5.73□□□□□ -1.49
CDH1-211ENST00000567320 ADAM7Q9H2U9 754 aa5.73□□□□□ -1.49
CDH1-211ENST00000567320 HCFC2Q9Y5Z7 792 aa5.73□□□□□ -1.49
CDH1-211ENST00000567320 ZBTB7CA1YPR0 619 aa5.72□□□□□ -1.49
CDH1-211ENST00000567320 ZC3H12DA2A288 527 aaKnown RBP5.72□□□□□ -1.49
CDH1-211ENST00000567320 CELA3BP08861 270 aa5.72□□□□□ -1.49
CDH1-211ENST00000567320 DBHP09172 617 aa5.72□□□□□ -1.49
CDH1-211ENST00000567320 PRR5P85299 388 aa5.72□□□□□ -1.49
CDH1-211ENST00000567320 HEATR6Q6AI08 1181 aaKnown RBP5.72□□□□□ -1.49
CDH1-211ENST00000567320 CABP7Q86V35 215 aa5.72□□□□□ -1.49
CDH1-211ENST00000567320 GBP3Q9H0R5 595 aa5.72□□□□□ -1.49
CDH1-211ENST00000567320 METTL5Q9NRN9 209 aaKnown RBP5.72□□□□□ -1.49
CDH1-211ENST00000567320 SUSD2Q9UGT4 822 aa5.72□□□□□ -1.49
CDH1-211ENST00000567320 ZNF214Q9UL59 606 aaPredicted RBP5.72□□□□□ -1.49
CDH1-211ENST00000567320 DIS3Q9Y2L1 958 aaKnown RBP5.72□□□□□ -1.49
CDH1-211ENST00000567320 KCNC1P48547 511 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 PPP2R5EQ16537 467 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 DPY19L1Q2PZI1 675 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 PRRT2Q7Z6L0 340 aaPredicted RBP5.71□□□□□ -1.5
CDH1-211ENST00000567320 CXorf38Q8TB03 319 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 USP33Q8TEY7 942 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 HAUS7Q99871 368 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 SRRTQ9BXP5 876 aaKnown RBP5.71□□□□□ -1.5
CDH1-211ENST00000567320 KRTAP4-11Q9BYQ6 195 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 RXFP1Q9HBX9 757 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 LUC7LQ9NQ29 371 aaKnown RBP5.71□□□□□ -1.5
CDH1-211ENST00000567320 GINM1Q9NU53 330 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 WHRNQ9P202 907 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 PCDHB10Q9UN67 800 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 EFR3BQ9Y2G0 817 aa5.71□□□□□ -1.5
CDH1-211ENST00000567320 ADAMTS20P59510 1910 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 STXBP3O00186 592 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 SRGAP3O43295 1099 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 VAMP4O75379 141 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 PPM1BO75688 479 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 SEPHS1P49903 392 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 EIF6P56537 245 aaKnown RBP5.7□□□□□ -1.5
CDH1-211ENST00000567320 RACK1P63244 317 aaKnown RBP5.7□□□□□ -1.5
CDH1-211ENST00000567320 FOXO4P98177 505 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 PAK2Q13177 524 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 LCE5AQ5TCM9 118 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 ZNF654Q8IZM8 581 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 ADGRG2Q8IZP9 1017 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 RBBP8NLQ8NC74 664 aaPredicted RBP5.7□□□□□ -1.5
CDH1-211ENST00000567320 ALG3Q92685 438 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 FGD4Q96M96 766 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 USP40Q9NVE5 1235 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 DDX41Q9UJV9 622 aaKnown RBP5.7□□□□□ -1.5
CDH1-211ENST00000567320 SUGT1Q9Y2Z0 365 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 RWDD3Q9Y3V2 267 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 SLC12A7Q9Y666 1083 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 PMF1-BGLAPU3KQ54 211 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 LTBP3Q9NS15 1303 aa5.7□□□□□ -1.5
CDH1-211ENST00000567320 A0A087WZG4 1122 aa5.69□□□□□ -1.5
CDH1-211ENST00000567320 FFAR3O14843 346 aa5.69□□□□□ -1.5
CDH1-211ENST00000567320 IGFBP6P24592 240 aaPredicted RBP5.69□□□□□ -1.5
CDH1-211ENST00000567320 CORO7P57737 925 aa5.69□□□□□ -1.5
CDH1-211ENST00000567320 SLC7A5Q01650 507 aa5.69□□□□□ -1.5
CDH1-211ENST00000567320 EEF1DP3Q658K8 133 aa5.69□□□□□ -1.5
CDH1-211ENST00000567320 LZTR1Q8N653 840 aa5.69□□□□□ -1.5
CDH1-211ENST00000567320 BCAS3Q9H6U6 928 aa5.69□□□□□ -1.5
CDH1-211ENST00000567320 PHAXQ9H814 394 aaKnown RBP5.69□□□□□ -1.5
CDH1-211ENST00000567320 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
CDH1-211ENST00000567320 IRS2Q9Y4H2 1338 aa5.69□□□□□ -1.5
CDH1-211ENST00000567320 A0A1B0GTL3 188 aa5.68□□□□□ -1.5
CDH1-211ENST00000567320 CBFA2T2O43439 604 aa5.68□□□□□ -1.5
CDH1-211ENST00000567320 NCAM1P13591 858 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms