RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 USP17L8P0C7I0 530 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 SF3A3Q12874 501 aaKnown RBP eCLIP7.26□□□□□ -1.25
GINS3-206ENST00000567143 KANK3Q6NY19 840 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 USP17L1Q7RTZ2 530 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 STAG1Q8WVM7 1258 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 PSMD1Q99460 953 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 MCM9Q9NXL9 1143 aa7.26□□□□□ -1.25
GINS3-206ENST00000567143 FEZ2Q9UHY8 353 aaPredicted RBP7.26□□□□□ -1.25
GINS3-206ENST00000567143 ATF5Q9Y2D1 282 aaPredicted RBP7.26□□□□□ -1.25
GINS3-206ENST00000567143 LUC7L2Q9Y383 392 aaKnown RBP7.26□□□□□ -1.25
GINS3-206ENST00000567143 EPN1Q9Y6I3 576 aaPredicted RBP7.26□□□□□ -1.25
GINS3-206ENST00000567143 FAM205AQ6ZU69 1335 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 ERLIN1O75477 346 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 RPN1P04843 607 aaKnown RBP7.25□□□□□ -1.25
GINS3-206ENST00000567143 PARP1P09874 1014 aaKnown RBP7.25□□□□□ -1.25
GINS3-206ENST00000567143 ERCC5P28715 1186 aaPredicted RBP7.25□□□□□ -1.25
GINS3-206ENST00000567143 UBA7P41226 1012 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 TCP11X2Q5H9J9 407 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 FCHSD1Q86WN1 690 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 CEP112Q8N8E3 955 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 CNBD1Q8NA66 436 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 CNKSR1Q969H4 720 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 GJA10Q969M2 543 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 PANX2Q96RD6 677 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 TMEM60Q9H2L4 133 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 RCCD1A6NED2 376 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 NDUFA10O95299 355 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 IPO7O95373 1038 aaKnown RBP7.25□□□□□ -1.25
GINS3-206ENST00000567143 SSBP05455 408 aaKnown RBP eCLIP7.25□□□□□ -1.25
GINS3-206ENST00000567143 MYBL2P10244 700 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 IDEP14735 1019 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 MTIF2P46199 727 aaKnown RBP7.25□□□□□ -1.25
GINS3-206ENST00000567143 CCDC96Q2M329 555 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 LETM2Q2VYF4 491 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 TYW1BQ6NUM6 668 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 DYMQ7RTS9 669 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 FBXO3Q9UK99 471 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 IRS2Q9Y4H2 1338 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 CCDC194A0A1B0GVG4 234 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 RNF40O75150 1001 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 FCER1AP12319 257 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 ALDH1B1P30837 517 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 ARHGAP25P42331 645 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 MMP14P50281 582 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 EIF6P56537 245 aaKnown RBP7.25□□□□□ -1.25
GINS3-206ENST00000567143 TBC1D8BQ0IIM8 1120 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 CYP26C1Q6V0L0 522 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 DNAAF5Q86Y56 855 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 CCDC155Q8N6L0 562 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 GOLGA6L1Q8N7Z2 621 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 PROCA1Q8NCQ7 364 aaPredicted RBP7.25□□□□□ -1.25
GINS3-206ENST00000567143 HDAC7Q8WUI4 952 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 PHF20Q9BVI0 1012 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 TANGO6Q9C0B7 1094 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 FAM107BQ9H098 131 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 PIM2Q9P1W9 311 aa7.25□□□□□ -1.25
GINS3-206ENST00000567143 MAGEC2Q9UBF1 373 aaPredicted RBP7.25□□□□□ -1.25
GINS3-206ENST00000567143 REXO2Q9Y3B8 237 aaKnown RBP7.25□□□□□ -1.25
GINS3-206ENST00000567143 MYO5AQ9Y4I1 1855 aaKnown RBP7.25□□□□□ -1.25
GINS3-206ENST00000567143 BBOX1O75936 387 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 FGFR2P21802 821 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 ASIC1P78348 528 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 TROAPQ12815 778 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 SEC23AQ15436 765 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 DIXDC1Q155Q3 683 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 CCDC152Q4G0S7 254 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 CDKAL1Q5VV42 579 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 CSGALNACT2Q8N6G5 542 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 CCDC148Q8NFR7 591 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 CELF1Q92879 486 aaKnown RBP7.24□□□□□ -1.25
GINS3-206ENST00000567143 GSDMAQ96QA5 445 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 CTAGE1Q96RT6 745 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 RNF26Q9BY78 433 aaPredicted RBP7.24□□□□□ -1.25
GINS3-206ENST00000567143 CENPHQ9H3R5 247 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 MMRN2Q9H8L6 949 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 SLC39A2Q9NP94 309 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 TBC1D7Q9P0N9 293 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 L1RE1Q9UN81 338 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 RRP15Q9Y3B9 282 aaKnown RBP7.24□□□□□ -1.25
GINS3-206ENST00000567143 MROH5Q6ZUA9 1318 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 SCN4AP35499 1836 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 FAM237AA0A1B0GTK4 181 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 ESYT3A0FGR9 886 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 NCK2O43639 380 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 BUB1O43683 1085 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 EIF3JO75822 258 aaKnown RBP7.24□□□□□ -1.25
GINS3-206ENST00000567143 TUBB4AP04350 444 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 SCG2P13521 617 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 TFAP4Q01664 338 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 LRRC41Q15345 812 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 NT5DC1Q5TFE4 455 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 KCTD16Q68DU8 428 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 CTR9Q6PD62 1173 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 TMTC1Q8IUR5 882 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 TMTC2Q8N394 836 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 NLGN2Q8NFZ4 835 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 JAKMIP2Q96AA8 810 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 CRACR2AQ9BSW2 395 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 DEF6Q9H4E7 631 aa7.24□□□□□ -1.25
GINS3-206ENST00000567143 MLXIPQ9HAP2 919 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms