RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 LRRC1Q9BTT6 524 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 EHD4Q9H223 541 aa17.5■□□□□ 0.39
COMMD4-215ENST00000566843 DMGDHQ9UI17 866 aaKnown RBP17.5■□□□□ 0.39
COMMD4-215ENST00000566843 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
COMMD4-215ENST00000566843 B4DLN1 442 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 MCM7P33993 719 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 EPHB4P54760 987 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 EZH2Q15910 746 aaKnown RBP17.49■□□□□ 0.39
COMMD4-215ENST00000566843 FAM98CQ17RN3 349 aaKnown RBP17.49■□□□□ 0.39
COMMD4-215ENST00000566843 NAALADL2Q58DX5 795 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 ANKRD18AQ8IVF6 992 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 HDAC7Q8WUI4 952 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 RRP36Q96EU6 259 aaKnown RBP17.49■□□□□ 0.39
COMMD4-215ENST00000566843 DHTKD1Q96HY7 919 aaPredicted RBP17.49■□□□□ 0.39
COMMD4-215ENST00000566843 TRIM47Q96LD4 638 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 DUSP9Q99956 384 aaKnown RBP17.49■□□□□ 0.39
COMMD4-215ENST00000566843 DISC1Q9NRI5 854 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 MINDY4BA8MYZ0 360 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 PSMA7O14818 248 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 ZNF263O14978 683 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 FGRP09769 529 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 MIGA1Q8NAN2 632 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 SPATA4Q8NEY3 305 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 TUBGCP2Q9BSJ2 902 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 TOGARAM1Q9Y4F4 1720 aa17.49■□□□□ 0.39
COMMD4-215ENST00000566843 MACROD2A1Z1Q3 448 aa17.48■□□□□ 0.39
COMMD4-215ENST00000566843 TACC1O75410 805 aa17.48■□□□□ 0.39
COMMD4-215ENST00000566843 CLSTN1O94985 981 aa17.48■□□□□ 0.39
COMMD4-215ENST00000566843 HNRNPH3P31942 346 aaKnown RBP17.48■□□□□ 0.39
COMMD4-215ENST00000566843 HNRNPH1P31943 449 aaKnown RBP17.48■□□□□ 0.39
COMMD4-215ENST00000566843 NNTQ13423 1086 aa17.48■□□□□ 0.39
COMMD4-215ENST00000566843 VPS72Q15906 364 aa17.48■□□□□ 0.39
COMMD4-215ENST00000566843 DDB1Q16531 1140 aa17.48■□□□□ 0.39
COMMD4-215ENST00000566843 SKIDA1Q1XH10 827 aa17.48■□□□□ 0.39
COMMD4-215ENST00000566843 CNPY4Q8N129 248 aa17.48■□□□□ 0.39
COMMD4-215ENST00000566843 IQCDQ96DY2 449 aa17.48■□□□□ 0.39
COMMD4-215ENST00000566843 TRMT112Q9UI30 125 aaKnown RBP17.48■□□□□ 0.39
COMMD4-215ENST00000566843 RREB1Q92766 1687 aa17.48■□□□□ 0.39
COMMD4-215ENST00000566843 PES1O00541 588 aaKnown RBP17.47■□□□□ 0.39
COMMD4-215ENST00000566843 TRIM21P19474 475 aaKnown RBP17.47■□□□□ 0.39
COMMD4-215ENST00000566843 GSCP56915 257 aaPredicted RBP17.47■□□□□ 0.39
COMMD4-215ENST00000566843 TBC1D8BQ0IIM8 1120 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 TTMPQ5BVD1 217 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 SRBD1Q8N5C6 995 aaKnown RBP17.47■□□□□ 0.39
COMMD4-215ENST00000566843 TSEN2Q8NCE0 465 aaKnown RBP17.47■□□□□ 0.39
COMMD4-215ENST00000566843 ERGIC2Q96RQ1 377 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 SH2D4AQ9H788 454 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 USO1O60763 962 aaKnown RBP17.47■□□□□ 0.39
COMMD4-215ENST00000566843 LCA5LO95447 670 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 SCG2P13521 617 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 TCP1P17987 556 aaKnown RBP17.47■□□□□ 0.39
COMMD4-215ENST00000566843 INPP5BP32019 993 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 KLK7P49862 253 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 NLRP5P59047 1200 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 CYP27A1Q02318 531 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 KCNV1Q6PIU1 500 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 SPATS2Q86XZ4 545 aaKnown RBP17.47■□□□□ 0.39
COMMD4-215ENST00000566843 ZSCAN29Q8IWY8 852 aaPredicted RBP17.47■□□□□ 0.39
COMMD4-215ENST00000566843 ARL8AQ96BM9 186 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 KBTBD4Q9NVX7 518 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 LRWD1Q9UFC0 647 aa17.47■□□□□ 0.39
COMMD4-215ENST00000566843 SMIM22K7EJ46 135 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 STARD3NLO95772 234 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 PCP11498 1178 aaKnown RBP17.46■□□□□ 0.39
COMMD4-215ENST00000566843 PFKFB3Q16875 520 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-215ENST00000566843 EMC10Q5UCC4 262 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 HAUS3Q68CZ6 603 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 B4GALNT4Q76KP1 1039 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 CCDC91Q7Z6B0 441 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 SDR42E1Q8WUS8 393 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 PAGR1Q9BTK6 254 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 HYOU1Q9Y4L1 999 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 AFF2P51816 1311 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 ADAMTS3O15072 1205 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 CYP7A1P22680 504 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 USP8P40818 1118 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 SPA17Q15506 151 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 MIIPQ5JXC2 388 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 BARGINQ6ZT62 677 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 FAM114A1Q8IWE2 563 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 PRPF38AQ8NAV1 312 aaKnown RBP17.46■□□□□ 0.39
COMMD4-215ENST00000566843 OSBPL9Q96SU4 736 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 CDCA7Q9BWT1 371 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-215ENST00000566843 STIM2Q9P246 746 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 CAPN6Q9Y6Q1 641 aa17.46■□□□□ 0.39
COMMD4-215ENST00000566843 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.46■□□□□ 0.38
COMMD4-215ENST00000566843 A0A0G2JS52 829 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 SNAP23O00161 211 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 ZEB2O60315 1214 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 HSF2BPO75031 334 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 CCNE1P24864 410 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 FNTAP49354 379 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 ADGRA1Q86SQ6 560 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 IQCA1Q86XH1 822 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 CSGALNACT2Q8N6G5 542 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 CCDC42Q96M95 316 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 CCSER1Q9C0I3 900 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 LRP2BPQ9P2M1 347 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 PCDHA13Q9Y5I0 950 aa17.45■□□□□ 0.38
COMMD4-215ENST00000566843 NUP98P52948 1817 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms