RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 CCPG1Q9ULG6 757 aa11.89□□□□□ -0.51
GTF3C1-206ENST00000566779 PRR12Q9ULL5 1215 aa11.89□□□□□ -0.51
GTF3C1-206ENST00000566779 BAZ2BQ9UIF8 2168 aaKnown RBP11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 SEPT4O43236 478 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 DHX16O60231 1041 aaKnown RBP11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 GOLGA8HP0CJ92 632 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 ZNF792Q3KQV3 632 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 SYDE2Q5VT97 1194 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 ASTLQ6HA08 431 aaPredicted RBP11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 IQCA1Q86XH1 822 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 PLPP6Q8IY26 295 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 RUFY2Q8WXA3 655 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 FERMT2Q96AC1 680 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 TRERF1Q96PN7 1200 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 TINF2Q9BSI4 451 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 DSCC1Q9BVC3 393 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 KAT14Q9H8E8 782 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 XPNPEP3Q9NQH7 507 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 FBXO40Q9UH90 709 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 CTNNA3Q9UI47 895 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 BOLA1Q9Y3E2 137 aa11.88□□□□□ -0.51
GTF3C1-206ENST00000566779 RAD50Q92878 1312 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 POTEB2H3BUK9 544 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 PGK1P00558 417 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 RARBP10826 455 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 CNTN2Q02246 1040 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 LRRC26Q2I0M4 334 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 NOL8Q76FK4 1167 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 TICAM2Q86XR7 235 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 CHST13Q8NET6 341 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 UBAC1Q9BSL1 405 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 CPVLQ9H3G5 476 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 ATP11BQ9Y2G3 1177 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 DDX49Q9Y6V7 483 aaKnown RBP11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 LTBP2Q14767 1821 aa11.87□□□□□ -0.51
GTF3C1-206ENST00000566779 ZNF536O15090 1300 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 TNKSO95271 1327 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 ATP2A1O14983 1001 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 FGRP09769 529 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 PDHBP11177 359 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 PCP11498 1178 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 CAPN2P17655 700 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 CHMLP26374 656 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 OAZ1P54368 228 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 USH1GQ495M9 461 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 MUM1L1Q5H9M0 696 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 ARMCX2Q7L311 632 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 ARRDC4Q8NCT1 418 aa11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 A1CFQ9NQ94 594 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 PRDM5Q9NQX1 630 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 RBM27Q9P2N5 1060 aaKnown RBP11.86□□□□□ -0.51
GTF3C1-206ENST00000566779 PTPDC1A2A3K4 754 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 DNM1LO00429 736 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 FDX1P10109 184 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 AKR1A1P14550 325 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 ADCYAP1R1P41586 468 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 PTH1RQ03431 593 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 ZNF543Q08ER8 600 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 TRDNQ13061 729 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 EEPD1Q7L9B9 569 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 PNMA1Q8ND90 353 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 ZSCAN10Q96SZ4 725 aaPredicted RBP11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 KRT23Q9C075 422 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 UBA5Q9GZZ9 404 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 TCP11L1Q9NUJ3 509 aa11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 DIS3Q9Y2L1 958 aaKnown RBP11.85□□□□□ -0.51
GTF3C1-206ENST00000566779 ICAM1P05362 532 aa11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 COL6A1P12109 1028 aa11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 CALML3P27482 149 aa11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 RTP1P59025 263 aa11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 LRRC41Q15345 812 aa11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 TKFCQ3LXA3 575 aa11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 RALYLQ86SE5 291 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 CCDC144CPQ8IYA2 1237 aa11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 ENAHQ8N8S7 591 aaPredicted RBP11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 KRI1Q8N9T8 703 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 PURBQ96QR8 312 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 RANBP17Q9H2T7 1088 aaKnown RBP11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 CNNM2Q9H8M5 875 aa11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 PRKAG2Q9UGJ0 569 aa11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 SYNGAP1Q96PV0 1343 aa11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 SYNRGQ9UMZ2 1314 aa11.84□□□□□ -0.51
GTF3C1-206ENST00000566779 DNAJC25-GNG10A0A024R161 153 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 NFIBO00712 420 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 SLC34A2O95436 690 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 SNAI1O95863 264 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 C6orf222P0C671 652 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 ZNF865P0CJ78 1059 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 MAGEA10P43363 369 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 MDM2Q00987 491 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 ACVR2BQ13705 512 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 CDC37Q16543 378 aaPredicted RBP11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 TRIM60Q495X7 471 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 IFIT1BQ5T764 474 aaKnown RBP11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 SLC30A10Q6XR72 485 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 KIAA1211Q6ZU35 1233 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 CHST3Q7LGC8 479 aa11.83□□□□□ -0.52
GTF3C1-206ENST00000566779 RNF180Q86T96 592 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms